TCONS_00058381 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058381
Unique NameTCONS_00058381
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1388

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058381 ID=TCONS_00058381|Name=TCONS_00058381|organism=Clytia hemisphaerica|type=transcript|length=1388bp
CACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATC
AACATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAAT
GATGAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGA
TGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTT
TTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATT
CTCCATAAGGCTCCGGTCACTCAACAAGATGATGATTTGGAGAGTGGATT
TGATGATACAGCAGATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTC
CTGAATATGACAGAAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTC
ACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCA
ACATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATG
ATGAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGAT
GATTTGGAGAGTGGATTTGATGATACAGCAgcTTCTATTGCACGCCCTAT
TAGGAAAGCCAAGATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAA
CCAGGGAACCAGGAATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAA
AAAACATCAGCCTCAAacAACAATTCAATGAAACGCAAaagaaaagagga
aaagaaagagACTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAA
AAACTGATGATAATAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGT
CATCTCCAGTGTTCCGGCATAAAATATCGGACGTCAAAATATGACACTAT
TAATCTTGAAAATATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAA
GATTGAACAATAAAAAGTGTCTGTATTTTTACTCAACGTAACTACAGTAA
TCGTATTTTTATATGGTCGAGCTCTCTTTTGCGAATTGGGATAAATGTTT
TACGAAGACAATAACAATGGAAATAGGTCTTGAATTCCCAAGtcaattga
atgaaaacaaaaacaaaatttgtcaAAGTCTTTCTTGAAGGGAAATCCGG
ACTTTTTTGCACGTCCTATGTAATAGGCTAATCGCAATAAACAATTTAAC
CCCCATGTTGAGGAAGTCACTTTTGGAAAATATTCATCCATAGTCCTTAT
AAAAACCCTGGTCCGgaagcttatttttcaaatattttgttagctttttc
ctttgttgccatcaaaagataaaaatcaatttgctcAATTTTGGATCACG
TTACCGagtactcctcttgggattggtttgagcaaaac
Run BLAST on NCBI

protein sequence of TCONS_00058381-protein

>TCONS_00058381-protein ID=TCONS_00058381-protein|Name=TCONS_00058381-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
TQQDDDLESGFDDTADQHKRSFQRKTAPEYDRNDEMDILHKKAPVTEKDD
DLESGFDDTADQHKRSFQRKTAPEYDRNDEMDILHKAPVTQQDDDLESGF
DDTADQHKRSFQRKTAPEYDRNVEMDILHKAPVTQQDDDLESGFDDTADQ
HKRSFQRKTAPEYDRNDEMDILHKKAPVTEKDDDLESGFDDTAASIARPI
RKAKMRNSKESTDSVTTREPGIRKRGKENTKAKKTSASNNNSMKRKRKEE
KKETIMCTGCGEKYDEKTDDNRWVQCDACEQWCHLQCSGIKYRTSKYDTI
NLENIPFKCRTSCLK
Run BLAST on NCBI

transcript from alignment at scaffold_31:199..3520+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058381 ID=TCONS_00058381|Name=TCONS_00058381|organism=Clytia hemisphaerica|type=transcript|length=3322bp|location=Sequence derived from alignment at scaffold_31:199..3520+ (Clytia hemisphaerica)
CACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGGTG
agaaaatctttacaaatagaaattATCGTTATTTTTCTACGGTTCtcttt
ttctattgttatttttcGAAGTTTATtgattatattatttttatctACTT
AGATCAACATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACA
GAAATGATGAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAA
GATGATGATTTGGAGAGTGGATTTGATGATACAGCAGGTGagaaaatctt
tacaaatagaaattATCGTTATTTTTCTACGGTTCTCTTTTTccattgtt
atttttcattcacTTTGAAGTTTATtgattatattatttttatctACTTA
GATCAACATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAG
AAATGATGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACAAGATG
ATGATTTGGAGAGTGGATTTGATGATACAGCAGGTgagaaaatcttttac
aaataGAAATTATCGTTATTTTTCTACGGTTCTCTTTTTccattgttatt
tttcattcacTTTGAAGTTTATTGATTATATTATTCTTATCTACTTAGAT
CAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAA
TGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACAAGATGATG
ATTTGGAGAGTGGATTTGATGATACAGCAGGTgagaaaatcttttacaaa
taGAAATTATCGTTATTTTTCTACGGTTCTCTTTTTccattgttattttt
cattcacTTTGAAGTTTATtgattatattatttttatctACTTAGATCAA
CATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGA
TGAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATG
ATTTGGAGAGTGGATTTGATGATACAGCAggtgagaaaaatttgaaaaca
acaatTCTCCCGAGTAACAAACGTGTTGACTATAAATGGATAAACTTGAA
TTTcttgggtcatttattaaatttggttcattggatcaaaagttatccta
atttgaaaaaaaagttacttCAGGAAAGTactcaaaaacgttgaaaatcg
acctatcaaatttttattctgaaattttcagtagcgACAGCTTTTGCACG
AATAAGAGCATTACGTAGTAATTtagaaacataatttttttcaaacttga
gcctagaaagggtttaaaatcttcatcaaaatcatttccaTTTGTAAAAG
GATTAAACTTTTTAGATCTCTTTTTAGAATATTCACctgaaagagagaaa
cttttttgtggcgcaccagGTATATAATATCACTATATTGAAAAcgattt
cattttctttcagcTTCTATTGCACGCCCTATTAGGAAAGCCAAGATGAG
AAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGTAAGCTTTTTTTTC
ATCCTATCAGATTCATGTCCCGTTTCAAgctatttttcttttcgcatctT
GAACTTTCAAAATGTTGTCAATTATGAATACTAACTATCAGAATTTTCCT
TTGAATGTAACAAAATGAATCCTTATTATTGTTattcttgtttttattat
tattgtatTCAAAGATTCTATTGTATTACTTATCTTCGTTAGCCGAATTG
AGAAACCAGCCCATAGCAAACCCAAACCTCTGATAAGTTTTACATCTCTT
TCAGGGGAACCAGGAATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAA
AAAAACATCAGCCTCAAGTATGGTTATTTTCCCGTTATAAATGTCCAGGG
CCTAAAGTTACTCTTGAAATTGCCTTTTTGATTAACATAATTTTATATCT
TAAACTACAGGTacatgaaattttattttcaaaactttttagatATAATC
CCTATTTCTTTTCCAATTGAGTTTGCCTCTCATTTTGTATGCCATTTTGA
GTGGTACAATATCGAATCTTTTGTATATATGACAGTCAAATCTAGTATGG
GAGTATTCCTCTGGCTCTGGGTCATTTATTATCACAATTGtaattctctt
ttattttagacAACAATTCAATGAAACGCAAaagaaaagaggaaaagaaa
gagACTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAACTGA
TGATAATAGGTATGAAGAGTCGTTATGTTCGATTTTTTAGATCAAAAGCA
CTTCCTTTTTAAAGATTATACAAGGAAGACCTTTCTTGGAATTAAAGCAT
ACCGTTTTCTTGTGAAAATTTAGAAAGAAGATATTATAGAGAATGACTGG
TAGCAGTAGTTTAACCTACTTTAAACACCATCAGTTTTTGCTTCTCAATC
TCAATTACTctaataatttaattttgaattttgcaaaaaattttcaCCCA
ATACATTTTTATTCCGAAcccctgcttgttaatttttggaaaattttatt
tgaaagttatTTTCCTTGCCCTAGTTATTCTGTATTAACCTGCTTTTCTA
AAATTCTCTCTGTAATACCTACTCCTGCGAAAGGAGAGGGGATCCAGAGG
CTTCATATATAATATCTATATCTAGTATCCACTGGTATTCGAAGATATTT
CGAATGTCTGTTTTTCATGTTTGTTCGATGTCTTATCATATTTATTATAG
GTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCTCCAGTGTTCCG
GCATAAAATATCGGACGTCAAAATATGACACTATTAATCTTGAAAATATA
CCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAAGATTGAACAATAAAAA
GTGTCTGTATTTTTACTCAACGTAACTACAGTAATCGTATTTTTATATGG
TCGAGCTCTCTTTTGCGAATTGGGATAAATGTTTTACGAAGACAATAACA
ATGGAAATAGGTCTTGAATTCCCAAGtcaattgaatgaaaacaaaaacaa
aatttgtcaAAGTCTTTCTTGAAGGGAAATCCGGACTTTTTTGCACGTCC
TATGTAATAGGCTAATCGCAATAAACAATTTAACCCCCATGTTGAGGAAG
TCACTTTTGGAAAATATTCATCCATAGTCCTTATAAAAACCCTGGTCCGg
aagcttatttttcaaatattttgttagctttttcctttgttgccatcaaa
agataaaaatcaatttgctcAATTTTGGATCACGTTACCGagtactcctc
ttgggattggtttgagcaaaac

Coding sequence (CDS) from alignment at scaffold_31:199..3520+

>TCONS_00058381 ID=TCONS_00058381|Name=TCONS_00058381|organism=Clytia hemisphaerica|type=CDS|length=8532bp|location=Sequence derived from alignment at scaffold_31:199..3520+ (Clytia hemisphaerica)
ACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCA
ACATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATG
ATGAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGAT
GATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTT
TCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTC
TCCATAAGGCTCCGGTCACTCAACAAGATGATGATTTGGAGAGTGGATTT
GATGATACAGCAGATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCC
TGAATATGACAGAAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCA
CTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAA
CATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGA
TGAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATG
ATTTGGAGAGTGGATTTGATGATACAGCAgcTTCTATTGCACGCCCTATT
AGGAAAGCCAAGATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAAC
CAGGGAACCAGGAATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAAA
AAACATCAGCCTCAAacAACAATTCAATGAAACGCAAaagaaaagaggaa
aagaaagagACTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAA
AACTGATGATAATAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTC
ATCTCCAGTGTTCCGGCATAAAATATCGGACGTCAAAATATGACACTATT
AATCTTGAAAATATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAAC
TCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAAC
ATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGAT
GAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGA
TTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTTTC
AAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTCTC
CATAAGGCTCCGGTCACTCAACAAGATGATGATTTGGAGAGTGGATTTGA
TGATACAGCAGATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTG
AATATGACAGAAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACT
CAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACA
TAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATG
AAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGAT
TTGGAGAGTGGATTTGATGATACAGCAgcTTCTATTGCACGCCCTATTAG
GAAAGCCAAGATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAACCA
GGGAACCAGGAATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAAAAA
ACATCAGCCTCAAacAACAATTCAATGAAACGCAAaagaaaagaggaaaa
gaaagagACTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAA
CTGATGATAATAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCAT
CTCCAGTGTTCCGGCATAAAATATCGGACGTCAAAATATGACACTATTAA
TCTTGAAAATATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAACTC
AACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACAT
AAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGA
AATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATT
TGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTTTCAA
AGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTCTCCA
TAAGGCTCCGGTCACTCAACAAGATGATGATTTGGAGAGTGGATTTGATG
ATACAGCAGATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAA
TATGACAGAAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCA
ACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATA
AAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAA
ATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTT
GGAGAGTGGATTTGATGATACAGCAgcTTCTATTGCACGCCCTATTAGGA
AAGCCAAGATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGG
GAACCAGGAATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAAAAAAC
ATCAGCCTCAAacAACAATTCAATGAAACGCAAaagaaaagaggaaaaga
aagagACTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAACT
GATGATAATAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCT
CCAGTGTTCCGGCATAAAATATCGGACGTCAAAATATGACACTATTAATC
TTGAAAATATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAACTCAA
CAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAA
AAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAA
TGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTG
GAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTTTCAAAG
GAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTCTCCATA
AGGCTCCGGTCACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGAT
ACAGCAGATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAATA
TGACAGAAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAAC
AAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAA
AGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAAT
GGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGG
AGAGTGGATTTGATGATACAGCAgcTTCTATTGCACGCCCTATTAGGAAA
GCCAAGATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGGGA
ACCAGGAATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAAAAAACAT
CAGCCTCAAacAACAATTCAATGAAACGCAAaagaaaagaggaaaagaaa
gagACTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAACTGA
TGATAATAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCTCC
AGTGTTCCGGCATAAAATATCGGACGTCAAAATATGACACTATTAATCTT
GAAAATATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAACTCAACA
AGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAA
GAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATG
GACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGA
GAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTTTCAAAGGA
AGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTCTCCATAAG
GCTCCGGTCACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATAC
AGCAGATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATG
ACAGAAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACAA
GATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAG
AAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGG
ACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAG
AGTGGATTTGATGATACAGCAgcTTCTATTGCACGCCCTATTAGGAAAGC
CAAGATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGGGAAC
CAGGAATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAAAAAACATCA
GCCTCAAacAACAATTCAATGAAACGCAAaagaaaagaggaaaagaaaga
gACTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAACTGATG
ATAATAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCTCCAG
TGTTCCGGCATAAAATATCGGACGTCAAAATATGACACTATTAATCTTGA
AAATATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAACTCAACAAG
ATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGA
AGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGA
CATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAGA
GTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTTTCAAAGGAAG
ACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTCTCCATAAGGC
TCCGGTCACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAG
CAGATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGAC
AGAAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACAAGA
TGATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAA
GTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGAC
ATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAGAG
TGGATTTGATGATACAGCAgcTTCTATTGCACGCCCTATTAGGAAAGCCA
AGATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGGGAACCA
GGAATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAAAAAACATCAGC
CTCAAacAACAATTCAATGAAACGCAAaagaaaagaggaaaagaaagagA
CTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAACTGATGAT
AATAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCTCCAGTG
TTCCGGCATAAAATATCGGACGTCAAAATATGACACTATTAATCTTGAAA
ATATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAACTCAACAAGAT
GATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAG
TTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACA
TTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAGAGT
GGATTTGATGATACAGCAGATCAACATAAAAGAAGTTTTCAAAGGAAGAC
AGCTCCTGAATATGACAGAAATGATGAAATGGACATTCTCCATAAGGCTC
CGGTCACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCA
GATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAG
AAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACAAGATG
ATGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGT
TTTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACAT
TCTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAGAGTG
GATTTGATGATACAGCAgcTTCTATTGCACGCCCTATTAGGAAAGCCAAG
ATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGGGAACCAGG
AATTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAAAAAACATCAGCCT
CAAacAACAATTCAATGAAACGCAAaagaaaagaggaaaagaaagagACT
ATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAACTGATGATAA
TAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCTCCAGTGTT
CCGGCATAAAATATCGGACGTCAAAATATGACACTATTAATCTTGAAAAT
ATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAACTCAACAAGATGA
TGATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTT
TTCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATT
CTCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAGAGTGG
ATTTGATGATACAGCAGATCAACATAAAAGAAGTTTTCAAAGGAAGACAG
CTCCTGAATATGACAGAAATGATGAAATGGACATTCTCCATAAGGCTCCG
GTCACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGA
TCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAA
ATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACAAGATGAT
GATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTT
TCAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTC
TCCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAGAGTGGA
TTTGATGATACAGCAgcTTCTATTGCACGCCCTATTAGGAAAGCCAAGAT
GAGAAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGGGAACCAGGAA
TTCGAAAACGTGGCAAAGAAAATACGAAGGCGAAAAAAACATCAGCCTCA
AacAACAATTCAATGAAACGCAAaagaaaagaggaaaagaaagagACTAT
TATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAACTGATGATAATA
GGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCTCCAGTGTTCC
GGCATAAAATATCGGACGTCAAAATATGACACTATTAATCTTGAAAATAT
ACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAACTCAACAAGATGATG
ATTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTTT
CAAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTCT
CCATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAGAGTGGAT
TTGATGATACAGCAGATCAACATAAAAGAAGTTTTCAAAGGAAGACAGCT
CCTGAATATGACAGAAATGATGAAATGGACATTCTCCATAAGGCTCCGGT
CACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGATC
AACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGAAAT
GTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACAAGATGATGA
TTTGGAGAGTGGATTTGATGATACAGCAGATCAACATAAAAGAAGTTTTC
AAAGGAAGACAGCTCCTGAATATGACAGAAATGATGAAATGGACATTCTC
CATAAAAAGGCTCCGGTCACTGAAAAAGATGATGATTTGGAGAGTGGATT
TGATGATACAGCAgcTTCTATTGCACGCCCTATTAGGAAAGCCAAGATGA
GAAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGGGAACCAGGAATT
CGAAAACGTGGCAAAGAAAATACGAAGGCGAAAAAAACATCAGCCTCAAa
cAACAATTCAATGAAACGCAAaagaaaagaggaaaagaaagagACTATTA
TGTGTACGGGATGTGGAGAAAAGTACGACGAAAAAACTGATGATAATAGG
TGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCTCCAGTGTTCCGG
CATAAAATATCGGACGTCAAAATATGACACTATTAATCTTGAAAATATAC
CGTTTAAGTGTAGAACGTCGTGTTTAAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036772XLOC_036772Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058381-exon-scaffold_31-1491911889:199..245TCONS_00058381-exon-scaffold_31-1491911889:199..245Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:199..245TCONS_00058381-exon-scaffold_31-1510915933:199..245Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:199..245TCONS_00058381-exon-scaffold_31-1575043694:199..245Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1491911889:351..485TCONS_00058381-exon-scaffold_31-1491911889:351..485Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:351..485TCONS_00058381-exon-scaffold_31-1510915933:351..485Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:351..485TCONS_00058381-exon-scaffold_31-1575043694:351..485Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1491911889:600..731TCONS_00058381-exon-scaffold_31-1491911889:600..731Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:600..731TCONS_00058381-exon-scaffold_31-1510915933:600..731Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:600..731TCONS_00058381-exon-scaffold_31-1575043694:600..731Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1491911889:847..978TCONS_00058381-exon-scaffold_31-1491911889:847..978Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:847..978TCONS_00058381-exon-scaffold_31-1510915933:847..978Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:847..978TCONS_00058381-exon-scaffold_31-1575043694:847..978Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1491911889:1094..1228TCONS_00058381-exon-scaffold_31-1491911889:1094..1228Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:1094..1228TCONS_00058381-exon-scaffold_31-1510915933:1094..1228Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:1094..1228TCONS_00058381-exon-scaffold_31-1575043694:1094..1228Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1491911889:1662..1733TCONS_00058381-exon-scaffold_31-1491911889:1662..1733Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:1662..1733TCONS_00058381-exon-scaffold_31-1510915933:1662..1733Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:1662..1733TCONS_00058381-exon-scaffold_31-1575043694:1662..1733Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1491911889:2003..2065TCONS_00058381-exon-scaffold_31-1491911889:2003..2065Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:2003..2065TCONS_00058381-exon-scaffold_31-1510915933:2003..2065Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:2003..2065TCONS_00058381-exon-scaffold_31-1575043694:2003..2065Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1491911889:2358..2457TCONS_00058381-exon-scaffold_31-1491911889:2358..2457Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:2358..2457TCONS_00058381-exon-scaffold_31-1510915933:2358..2457Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:2358..2457TCONS_00058381-exon-scaffold_31-1575043694:2358..2457Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1491911889:2949..3520TCONS_00058381-exon-scaffold_31-1491911889:2949..3520Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1510915933:2949..3520TCONS_00058381-exon-scaffold_31-1510915933:2949..3520Clytia hemisphaericaexon
TCONS_00058381-exon-scaffold_31-1575043694:2949..3520TCONS_00058381-exon-scaffold_31-1575043694:2949..3520Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058381-proteinTCONS_00058381-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_31supercontigscaffold_31:199..3520 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.983851	0.288313	0.247974	0	1.82723	1.57339	1.33895	1.22662	0.501316	1.06879	0.690452	1.13742	0.403046	1.24693	1.53473	1.04608	1.42477	1.94471	1.72735	1.22505	1.90415	1.3698	0.713223	0.864989	0.0720125	0	0.609823	0	0.497022	0.256459
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058381 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top