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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059073 ID=TCONS_00059073|Name=TCONS_00059073|organism=Clytia hemisphaerica|type=transcript|length=2703bp
GGAAATACTGGCGGGAAGGTATCTTTATTATTCAAGACATAAACACTAAA
GAATATGTAGGCTATGTCATGTCTTGGTTGCCCAAACTAGATGTAAAGga
tAAATataagtcaaaaataaaaactaaagtaGTACATTAAAAATGGTGCA
AATTACTGAAGATCTGATTCGAAAACGATCTGAGCATAACGATTGTGAAA
TCACAACACTCGAAGAAATTTCACTTCATCAATGTGACATTGAACGTTTG
GAATACATTGGGAAGTGGTGTCGAGACTTGAAAATCTTATACCTACAATC
TAACTTGATTCCCAAAATTGAGAACATTCACCAACTAAAGAAATTAGAGT
ATTTGAATTTGGCTTTGAATAATATCTTGGTTATTGAGAATCTGAAAGGG
TGCGAGTCGCTGAAGAAACTTGATCTAACTGTTAACTTCGTTGGTAAAAT
CACCTCTATCGAGTCACTCAAAGGAAATGAATTTTTACGGGACATGTATT
TAACGGGTAACCCTTGTACGGAATATGTGGGTTATCGAGACTATGTAATT
GCGACATTGCCTCAGTTAACCAGTTTAGATGGTACACCGGTATCCAAGTC
TGAACGCATAAAGGCGAACCAGAAATTGACCGAACTGAGGTGCGATATGT
TGAGACAAGAGAAAATATATATGGCTAAACAAGACAAAGAGCAAGAAATT
GAGGAAATCGAGACAAACGGCGTCAAAAAAGAGAAAATGACTGAAGAGGA
ATTCTGGTCAAAACCTTCGAAATTTACTCCTCAAAGTCGCGTTGAAGCTC
ACCATTTCATGGAAGAAAAACGGAAAGAAAAAGAGGAAACTAAGAAAACC
GATTTTCCCGATTTAAGAAATTCGTTACAAAGAACAATCCGATTTTTCAC
TGATGATGGAAGACCGTTGAATATTAACCAggataaaatcgattttgaat
ttcaagagAATGATGACTTCACGGGCTACGTTTTGGATGTGGCGTGTTAC
AAACATTTAGATACCTCACTGATCGATGTTGATTTGCAACCACACTACGT
TCGTGTTACAATGAAAGGGAAAATACTTCAACTCTCTCTCAACGAGGAAA
TCAGTCCAGATAAAAGTACAGCACAGCGATCGCAAACCAGCGGACACTTA
CTTATCAACATGCCTAAGCTAAAATATATACTTGAAGGTCGTTGCTCTGG
TTCTAGACGGCCGAAAACCGATTCTAAAGGCGCGAAAATGGGCAGTAACG
AGTTTCCGGATGCAACTAAAACTCGGGAAACGAAAACTATCGGTTGTGAA
TCTGGTAAAACGAATACCGACGACTTGCAAAAGTCGGTTGAACGACTTGA
AGTGACAGAGAACGAGAATAAAATTGATTATACAAACATTGTAAAAGAGG
AAAACGAAAAATCTAAAGATTTGAATTCGTTTATTTTCAATGGAAAGAAG
AGGAAAGGGGGATCaccaatgaaaaataataaaaatgcaATTAGCGAAAA
TCAGTATGACGAACATTTCGTTGACGATTTAGATGTACCACCTTTGGAGT
GAGTTTTGTATGCAGATGGTTTATTGGCCATTTcgcagtcgcaaagcgta
atgggtaatcaggaccactgcgcgctaatgacgacttactattggtccaa
agttttgaacatttttgaacatttttgcgtctaaccaacgggAGAACTGT
TATCGAGGCGCAATCATTCCTGATTACCCATAATCCATTTAGACTATGAA
ATGACCTATGGCTGCATAGatcatttcacagtcgaaatgaatcatgggta
attaAGATTGATTGTGCCTCTATGACGGCTTCCCGTTGGTGAGACGCAGA
AACAGCCAAAAATTTAGGCCAACAGAAAGTCGTTATCACAGCGTgatggt
cctgattacccatgattcatttcgactgtgaaatggtctATTCCAcattc
ttttcttcaaaaagtttcgATGGAAATATATAAAACTTATAAAActtcat
ataaaaatattttttaagcatgtttgattttaaatattttatttattttt
cagaaaaatattatttgggTGTATGTATTGTAAATACTAAAAAGAATACA
AAGTTTTTGAGACAAGTTCTATTATTTTTTAAGTAGGATACAGATAACAT
GATAATAATATATGACATGTAAGCATGGAAAAATTAGTCTTTGAGTGATA
TAAATTATACATTGTTATAAAAATTTACGTATTATAAAGTATTTTATGGA
ATCAGCAGTTTTCCCCAAACATAGATTAATTAGATAcccatttttttata
agaacaaactatataagaaaacaaggcttcaatggccaaaaagTTCAGCA
CAActtaagaaaaatttaaggctttgcggactaaAAAACACACAATTTGA
GTGATAGACAAAAATAgtcgaaaaaaaaagtgaaaataagtACATTCTAA
GGCctgaaacttaaaaagttaagaatgtcctaaggcttcaaaattttaaa
tgctcatataaaaaaacgtgttcacttaaaatttaaaatttatggTAGAC
AAAGATTTTAATATTAACACAGTAGagataaaattaaatatttgttTCAC
TGAGCCCTTTTCATGCTGGGTTAGCGCGACACAGCGTAAATATTTTTGTG
ATCATCTGAGTGATAATAACCAGGGGGTGGGTTCTTCTGATATGGTGGTA
GCT Run BLAST on NCBI protein sequence of TCONS_00059073-protein >TCONS_00059073-protein ID=TCONS_00059073-protein|Name=TCONS_00059073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=469bp
MVQITEDLIRKRSEHNDCEITTLEEISLHQCDIERLEYIGKWCRDLKILY
LQSNLIPKIENIHQLKKLEYLNLALNNILVIENLKGCESLKKLDLTVNFV
GKITSIESLKGNEFLRDMYLTGNPCTEYVGYRDYVIATLPQLTSLDGTPV
SKSERIKANQKLTELRCDMLRQEKIYMAKQDKEQEIEEIETNGVKKEKMT
EEEFWSKPSKFTPQSRVEAHHFMEEKRKEKEETKKTDFPDLRNSLQRTIR
FFTDDGRPLNINQDKIDFEFQENDDFTGYVLDVACYKHLDTSLIDVDLQP
HYVRVTMKGKILQLSLNEEISPDKSTAQRSQTSGHLLINMPKLKYILEGR
CSGSRRPKTDSKGAKMGSNEFPDATKTRETKTIGCESGKTNTDDLQKSVE
RLEVTENENKIDYTNIVKEENEKSKDLNSFIFNGKKRKGGSPMKNNKNAI
SENQYDEHFVDDLDVPPLE Run BLAST on NCBI transcript from alignment at scaffold_316:172840..179359- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059073 ID=TCONS_00059073|Name=TCONS_00059073|organism=Clytia hemisphaerica|type=transcript|length=6520bp|location=Sequence derived from alignment at scaffold_316:172840..179359- (Clytia hemisphaerica)
GGAAATACTGGCGGGAAGGTATCTTTATTATTCAAGACATAAACACTAAA
GAATATGTAGGCTATGTCATGTCTTGGTTGCCCAAACTAGATGTAAAGGT
AGGGCAACTGCACTGGCTGTGTGTCAAGCCGGGTCATCGAGACAAAGGTA
TTGCAACTTGTCTTATTGACCAAGTTTTGTGCTTTTTCAAGGAGAATAAT
TTCGAATCAGTTTATTTAAAAACTGAAACGTTTAGGGATAAAGCTATTTC
TTTGTACAAGACATTTGGGTTTAAGGAGTATAATATAATGTTATGAAGTT
GCACAGTAAATACTTTAGGACATAGGCCATTTCACAGTCGAAATGGATCA
TGGGTAATCAGGTCAATGGGAGTAGCTTAGAAAAGTTGACCAAGTGGTCT
AACGGGTCAGCGTCTTATACTACGAGTTCCTGGTTTGAGTCAACGATCTT
TCCATGTTCCATTCTGATCATAGATAGCCGAGCTGGTTAACCATAGACTC
CGGCAAAACAATCGGGAAACTTAACTATCTAAAAGCTCTACTCCAAGGTC
CCGATTAAACGTCTCCTCCGCTTTCCCTAAAATTTTGCTTAGGATATAAG
CATCCTACAAAGCATTTTTCAACCTAAACATCTCCGAGCTGGAGCGGAAG
CACCCTGCATTGGAAAGCTTTCCATTGTTATAGAGGACCTGTAATTAACA
GATTCTATTGATAGCTACTAATACATGTATTATTATACAAAATTTGGGAA
ATTTCTTTCAATATTGAATTTGATTTAGAGATTTTATGCCTTTATTGAAG
AAGGACCTACCTTGTACCTATAGATCTAAAGTCTGAGACGCTATATTTCC
TAGGAATAAAGATTTCGAGACGAACCTCGGATGATCTCGGAAGATCTGAG
ACGTATTCTGCTGAATTCGTGCCTAAATGAAATTTTACTTACGACCTTTA
GGATTGAGAAATTTCCCTTAGCTTAGTTATTGTTTTGAGGCCTTAAGTTT
TCTTACGTTCAAAATGTTTTAACGATGTTGGATACATTTCGTTATGTAAG
TAACGAGACTAAGTGGTTTTATAGAACTTTTTAAGGAGCGATGGCCAAGT
GGTCAAAGGCGTCAGCGTCTCAAACCAGGGATTCGTGGTTCGAATCCCCG
CTCCTTCCAATGTTCCGTTCAGTTCATAGATAGCCGAGCCGGCTGGCCGT
GGACCCCGTGAAAACAATCGAAAGACTGTCTAAAAAGTCCTAGATTACTG
GGCTATCCACGTAAAATATCGACTCTATCTATCTATCTATCTATCTATTT
GACTCAATGAGCTTTTCCAGAAAAAAAACCATATCCCCCTGTTAGGGATG
CCCAACACTTTGTGGCTAGAAATTCTGGAACCCTCTGGGTCTATTTCTAT
TGAGATATACGTTATACGTTTTTTTTTCTCGGGAAAAGTCCAATGCTTTT
TTTTTCTTTTTAGGATAAATATAAGTCAAAAATAAAAACTAAAGTAGTAC
ATTAAAAATGGTGCAAATTACTGAAGATCTGATTCGAAAACGATCTGAGC
ATAACGATTGTGAAATCACAACACTCGAAGAAATTTCACTTCATCAATGT
GACATTGAACGTTTGGAATACATTGGGAAGTGGTGTCGAGACTTGAAAAT
CTTATACCTACAATCTAACTTGATTCCCAAAATTGAGAACATTCACCAAC
TAAAGAAATTAGAGTATTTGAATTTGGCTTTGAATAATATCTTGGTTATT
GAGAATCTGAAAGGGTGCGAGTCGCTGAAGAAACTTGATCTAACTGTTAA
CTTCGTTGGTAAAATCACCTCTATCGAGTCACTCAAAGGAAATGAATTTT
TACGGGACATGTATTTAACGGGTAACCCTTGTACGGAATATGTGGGTTAT
CGAGACTATGTAATTGCGACATTGCCTCAGTTAACCAGTTTAGATGGTAC
ACCGGTATCCAAGTCTGAACGCATAAAGGCGAACCAGAAATTGACCGAAC
TGAGGTGCGATATGTTGAGACAAGAGAAAATATATATGGCTAAACAAGAC
AAAGAGCAAGAAATTGAGGAAATCGAGACAAACGGCGTCAAAAAAGAGGT
TTGTAGTTTTACGGATTATACTATACGCGCGTTCTGTGTAAAGTGTAAAG
ATGTCATGGGAGAATTGAAGACAGTCATACGATGGTCGAATCGTGAGGTG
TGGAGAGAGGCCATTGTATTTTTCGATCTTGGTCGATCTTAGATTTTCTT
GATGTCAGATATGGGGGAGGCATTATATTCCTTAAGAGATATGAACTCTA
TTTGTTGGCTGGTGGTAGCGCTTTTGCTCAGTCTCACCGGGAAGAGGCCC
CCCTGTAGTTTTCGTGATGGCATGATTGGCGTTTTTTCAAGTTCGTTATT
TTGTGATTCAAGATTTTAAAGTGTGTGAATGCCTGATCGGAGGAACCAAC
GTGATCAACGTGATCGTGATAGAAAGGAAATTTAACTCGTGATAATATGA
TTTGGAAATTTTTTTTTTGCGTGATGGCGTGATTTGAAAGATGACTGGTG
GGGGCCTCCGGACGGGTGTGGTTTTGGTGTCCACGTCGCTAATCGTCCCA
TCGAATGGCAGTCCGAGTAGGTCTGTAGGATGGATGGGATTTCCTTAACA
TAATCGTCANTATTTATAAAATTAATATTTATAAAATTAATATGTATACT
AGTGAGATGCTCTGACCGGCTACGCTAGCAAAGTAGAGTGTTAGTAATTG
TAATTGTAAATTTAACTCGTGATAATGTGATTTGGAAATTTTTTTCTTGA
TCGATCTTAGAAAATGACTGAAGAGGAATTCTGGTCAAAACCTTCGAAAT
TTACTCCTCAAAGTCGCGTTGAAGCTCACCATTTCATGGAAGAAAAACGG
AAAGAAAAAGAGGAAACTAAGAAAACCGATTTTCCCGATTTAAGAAATTC
GTTACAAAGAACAATCCGATTTTTCACTGATGATGGAAGACCGTTGAATA
TTAACCAGGATAAAATCGATTTTGAATTTCAAGAGAATGATGACTTCACG
GGCTACGTTTTGGATGTGGCGTGTTACAAACATTTAGGTGAGAAAAACCA
TTTCTAACTTCTAACTGCTGACTTTAATCGGATTAATTTTCGCGAAATTT
AATCTTGCGTTTTTTTTACGAATGCATTTCATTTTCGCGAAAATAAACTT
TCGAAATCGATTGAGACTCGATGAATCGCGAAATTAATAGCATGCAAAAT
TTTTGAGATCAGATCTTCAGCGTAAGATAAACTGTAAATAAGCTATTTTT
TGGTGTTTAAAGGGCGGTCATTTTCAGCAAATTGTTGGCTGGTTTGCGAA
GTTTAATTAATTTTTTTTGAAATTTTGTGGCAGTGAATATACCTTCCCCA
ACTCATGTCATGCGAGGGGAATTGGATAGACAGAAAAAGTATGTGTGGAC
GATAAGGGTCGGTTTTTTCACCTTTCACTTTTCCAAAGTCTCTCTAAGGG
TTACGAAAATCAGAAAATTAAAAGTTGCCCCTGTAAGGGTCAAAAAAGTC
TCGCAAGCTACAATCATGGACAAAGTATTTGAANGGATAAAATCGATTTT
GAATTTCAAGAGAATGATGACTTCACGGGCTACGTTTTGGATGTGGCGTG
TTACAAACATTTAGGTGAGAAAAACCCTTCTAACTTTTTTATTAATTTTC
GCGAAATTTAATCTTGCGTTTTTTTTACGAATGCATGTCATTTTCGCCAA
AATAAACTTTCGAAATCGATTGAGACTCGATGACTCGCAAAATTAAAAGC
ACGTAAAATTTTCGAGATCAAATCTTCAGCGTAAGATAAACACTGTAAAT
TAGCTTTTTTTAGCGTTTAAAAGGTCATTTTCAACAAATTATTGGCTGGT
TTGCGAAGTTTAATTAATTTTTTTGAAATTTTGAGGCTCCCGAAATTGAA
TCTTGTAAAAATTAATCCAATTAAAGTAATTTTTTTTGTTTGTCAGTAAC
ATAATAAAAACGTTAAAGTAATTTTTTTTTTGTCAGTAACATAATAAAAA
CGTTCGTTACAACTCGAGAAAGTTTTTACGTTTTTTTTTTTCACTTGGCA
AGTGAATATACCTTCCCCGGGTCAACTCATGTCATGTGAGGGGAATTGGA
TAGACAGAAAAAGTATGTGCGGACGATAAGGGTCGGTTTTTTCACCTTTC
ACTTTTCCAAAGTCTCTCTAAGAGTTACGAAAATCAGAAAAAAGACGATA
TCGGCTTTCCGAATTCTCCCCGAATGATTACCCATGATGCATTGCGCAAA
AAAATTCACGGGCGATATTGACATTCCGTGAATTTTTTGCGCAATGCATC
ATGGGTAATCATTCGGGGAGAATTCGGAAAGCCGATATCGTCTATTCAAA
GTTGTCTCTGTAAGGGTCAAAAAAGTCTTGCAAGCTACAATCATAGACAA
AGTATTCAAGTTAAAGGGGATTTCCCTGCGAAATTTTTAACATCACAAAT
GATTTTTAAGTGCGTTAAAGTACGGTTGGAAAGTAGAGTTTTAACTCTGA
GTTTTAACATGAGACTTAAGCCTTAGGACATTAGGATCTCAGGATTTAAA
AGCTCAAATTTGCTCCAATAAGGCGTGGAGTATAGCCCAGAAGCCAACGA
ACCCCTCCAAAAACGAATTATTCAATGAAAGAAAGTGAAAGTGCTAAAAT
AGCAATTCTCGCCCGAACTTTAAATTCTGAAAAACATGAAAATATAAATA
TCTCAATATATTTTCATGATTGTAGTATGTAGTTCAAATGATCGTTTAGG
TTTGTTATATTTTTTATATCTTTGCAGATACCTCACTGATCGATGTTGAT
TTGCAACCACACTACGTTCGTGTTACAATGAAAGGGAAAATACTTCAACT
CTCTCTCAACGAGGAAATCAGTCCAGATAAAAGTACAGCACAGCGATCGC
AAACCAGCGGACACTTACTTATCAACATGCCTAAGCTAAAATATATACTT
GAAGGTCGTTGCTCTGGTTCTAGACGGCCGAAAACCGATTCTAAAGGCGC
GAAAATGGGCAGTAACGAGTTTCCGGATGCAACTAAAACTCGGGAAACGA
AAACTATCGGTTGTGAATCTGGTAAAACGAATACCGACGACTTGCAAAAG
TCGGTTGAACGACTTGAAGTGACAGAGAACGAGAATAAAATTGATTATAC
AAACATTGTAAAAGAGGAAAACGAAAAATCTAAAGATTTGAATTCGTTTA
TTTTCAATGGAAAGAAGAGGAAAGGGGGATCACCAATGAAAAATAATAAA
AATGCAATTAGCGAAAATCAGTATGACGAACATTTCGTTGACGATTTAGA
TGTACCACCTTTGGAGTGAGTTTTGTATGCAGATGGTTTATTGGCCATTT
CGCAGTCGCAAAGCGTAATGGGTAATCAGGACCACTGCGCGCTAATGACG
ACTTACTATTGGTCCAAAGTTTTGAACATTTTTGAACATTTTTGCGTCTA
ACCAACGGGAGAACTGTTATCGAGGCGCAATCATTCCTGATTACCCATAA
TCCATTTAGACTATGAAATGACCTATGGCTGCATAGATCATTTCACAGTC
GAAATGAATCATGGGTAATTAAGATTGATTGTGCCTCTATGACGGCTTCC
CGTTGGTGAGACGCAGAAACAGCCAAAAATTTAGGCCAACAGAAAGTCGT
TATCACAGCGTGATGGTCCTGATTACCCATGATTCATTTCGACTGTGAAA
TGGTCTATTCCACATTCTTTTCTTCAAAAAGTTTCGATGGAAATATATAA
AACTTATAAAACTTCATATAAAAATATTTTTTAAGCATGTTTGATTTTAA
ATATTTTATTTATTTTTCAGAAAAATATTATTTGGGTGTATGTATTGTAA
ATACTAAAAAGAATACAAAGTTTTTGAGACAAGTTCTATTATTTTTTAAG
TAGGATACAGATAACATGATAATAATATATGACATGTAAGCATGGAAAAA
TTAGTCTTTGAGTGATATAAATTATACATTGTTATAAAAATTTACGTATT
ATAAAGTATTTTATGGAATCAGCAGTTTTCCCCAAACATAGATTAATTAG
ATACCCATTTTTTTATAAGAACAAACTATATAAGAAAACAAGGCTTCAAT
GGCCAAAAAGTTCAGCACAACTTAAGAAAAATTTAAGGCTTTGCGGACTA
AAAAACACACAATTTGAGTGATAGACAAAAATAGTCGAAAAAAAAAGTGA
AAATAAGTACATTCTAAGGCCTGAAACTTAAAAAGTTAAGAATGTCCTAA
GGCTTCAAAATTTTAAATGCTCATATAAAAAAACGTGTTCACTTAAAATT
TAAAATTTATGGTAGACAAAGATTTTAATATTAACACAGTAGAGATAAAA
TTAAATATTTGTTTCACTGAGCCCTTTTCATGCTGGGTTAGCGCGACACA
GCGTAAATATTTTTGTGATCATCTGAGTGATAATAACCAGGGGGTGGGTT
CTTCTGATATGGTGGTAGCT Coding sequence (CDS) from alignment at scaffold_316:172840..179359- >TCONS_00059073 ID=TCONS_00059073|Name=TCONS_00059073|organism=Clytia hemisphaerica|type=CDS|length=4230bp|location=Sequence derived from alignment at scaffold_316:172840..179359- (Clytia hemisphaerica)
ATACCTCACTGATCGATGTTGATTTGCAACCACACTACGTTCGTGTTACA
ATGAAAGGGAAAATACTTCAACTCTCTCTCAACGAGGAAATCAGTCCAGA
TAAAAGTACAGCACAGCGATCGCAAACCAGCGGACACTTACTTATCAACA
TGCCTAAGCTAAAATATATACTTGAAGGTCGTTGCTCTGGTTCTAGACGG
CCGAAAACCGATTCTAAAGGCGCGAAAATGGGCAGTAACGAGTTTCCGGA
TGCAACTAAAACTCGGGAAACGAAAACTATCGGTTGTGAATCTGGTAAAA
CGAATACCGACGACTTGCAAAAGTCGGTTGAACGACTTGAAGTGACAGAG
AACGAGAATAAAATTGATTATACAAACATTGTAAAAGAGGAAAACGAAAA
ATCTAAAGATTTGAATTCGTTTATTTTCAATGGAAAGAAGAGGAAAGGGG
GATCACCAATGAAAAATAATAAAAATGCAATTAGCGAAAATCAGTATGAC
GAACATTTCGTTGACGATTTAGATGTACCACCTTTGGAGTGAAAAATGAC
TGAAGAGGAATTCTGGTCAAAACCTTCGAAATTTACTCCTCAAAGTCGCG
TTGAAGCTCACCATTTCATGGAAGAAAAACGGAAAGAAAAAGAGGAAACT
AAGAAAACCGATTTTCCCGATTTAAGAAATTCGTTACAAAGAACAATCCG
ATTTTTCACTGATGATGGAAGACCGTTGAATATTAACCAGGATAAAATCG
ATTTTGAATTTCAAGAGAATGATGACTTCACGGGCTACGTTTTGGATGTG
GCGTGTTACAAACATTTAGATGGTGCAAATTACTGAAGATCTGATTCGAA
AACGATCTGAGCATAACGATTGTGAAATCACAACACTCGAAGAAATTTCA
CTTCATCAATGTGACATTGAACGTTTGGAATACATTGGGAAGTGGTGTCG
AGACTTGAAAATCTTATACCTACAATCTAACTTGATTCCCAAAATTGAGA
ACATTCACCAACTAAAGAAATTAGAGTATTTGAATTTGGCTTTGAATAAT
ATCTTGGTTATTGAGAATCTGAAAGGGTGCGAGTCGCTGAAGAAACTTGA
TCTAACTGTTAACTTCGTTGGTAAAATCACCTCTATCGAGTCACTCAAAG
GAAATGAATTTTTACGGGACATGTATTTAACGGGTAACCCTTGTACGGAA
TATGTGGGTTATCGAGACTATGTAATTGCGACATTGCCTCAGTTAACCAG
TTTAGATGGTACACCGGTATCCAAGTCTGAACGCATAAAGGCGAACCAGA
AATTGACCGAACTGAGGTGCGATATGTTGAGACAAGAGAAAATATATATG
GCTAAACAAGACAAAGAGCAAGAAATTGAGGAAATCGAGACAAACGGCGT
CAAAAAAGAGATACCTCACTGATCGATGTTGATTTGCAACCACACTACGT
TCGTGTTACAATGAAAGGGAAAATACTTCAACTCTCTCTCAACGAGGAAA
TCAGTCCAGATAAAAGTACAGCACAGCGATCGCAAACCAGCGGACACTTA
CTTATCAACATGCCTAAGCTAAAATATATACTTGAAGGTCGTTGCTCTGG
TTCTAGACGGCCGAAAACCGATTCTAAAGGCGCGAAAATGGGCAGTAACG
AGTTTCCGGATGCAACTAAAACTCGGGAAACGAAAACTATCGGTTGTGAA
TCTGGTAAAACGAATACCGACGACTTGCAAAAGTCGGTTGAACGACTTGA
AGTGACAGAGAACGAGAATAAAATTGATTATACAAACATTGTAAAAGAGG
AAAACGAAAAATCTAAAGATTTGAATTCGTTTATTTTCAATGGAAAGAAG
AGGAAAGGGGGATCACCAATGAAAAATAATAAAAATGCAATTAGCGAAAA
TCAGTATGACGAACATTTCGTTGACGATTTAGATGTACCACCTTTGGAGT
GAAAAATGACTGAAGAGGAATTCTGGTCAAAACCTTCGAAATTTACTCCT
CAAAGTCGCGTTGAAGCTCACCATTTCATGGAAGAAAAACGGAAAGAAAA
AGAGGAAACTAAGAAAACCGATTTTCCCGATTTAAGAAATTCGTTACAAA
GAACAATCCGATTTTTCACTGATGATGGAAGACCGTTGAATATTAACCAG
GATAAAATCGATTTTGAATTTCAAGAGAATGATGACTTCACGGGCTACGT
TTTGGATGTGGCGTGTTACAAACATTTAGATGGTGCAAATTACTGAAGAT
CTGATTCGAAAACGATCTGAGCATAACGATTGTGAAATCACAACACTCGA
AGAAATTTCACTTCATCAATGTGACATTGAACGTTTGGAATACATTGGGA
AGTGGTGTCGAGACTTGAAAATCTTATACCTACAATCTAACTTGATTCCC
AAAATTGAGAACATTCACCAACTAAAGAAATTAGAGTATTTGAATTTGGC
TTTGAATAATATCTTGGTTATTGAGAATCTGAAAGGGTGCGAGTCGCTGA
AGAAACTTGATCTAACTGTTAACTTCGTTGGTAAAATCACCTCTATCGAG
TCACTCAAAGGAAATGAATTTTTACGGGACATGTATTTAACGGGTAACCC
TTGTACGGAATATGTGGGTTATCGAGACTATGTAATTGCGACATTGCCTC
AGTTAACCAGTTTAGATGGTACACCGGTATCCAAGTCTGAACGCATAAAG
GCGAACCAGAAATTGACCGAACTGAGGTGCGATATGTTGAGACAAGAGAA
AATATATATGGCTAAACAAGACAAAGAGCAAGAAATTGAGGAAATCGAGA
CAAACGGCGTCAAAAAAGAGATACCTCACTGATCGATGTTGATTTGCAAC
CACACTACGTTCGTGTTACAATGAAAGGGAAAATACTTCAACTCTCTCTC
AACGAGGAAATCAGTCCAGATAAAAGTACAGCACAGCGATCGCAAACCAG
CGGACACTTACTTATCAACATGCCTAAGCTAAAATATATACTTGAAGGTC
GTTGCTCTGGTTCTAGACGGCCGAAAACCGATTCTAAAGGCGCGAAAATG
GGCAGTAACGAGTTTCCGGATGCAACTAAAACTCGGGAAACGAAAACTAT
CGGTTGTGAATCTGGTAAAACGAATACCGACGACTTGCAAAAGTCGGTTG
AACGACTTGAAGTGACAGAGAACGAGAATAAAATTGATTATACAAACATT
GTAAAAGAGGAAAACGAAAAATCTAAAGATTTGAATTCGTTTATTTTCAA
TGGAAAGAAGAGGAAAGGGGGATCACCAATGAAAAATAATAAAAATGCAA
TTAGCGAAAATCAGTATGACGAACATTTCGTTGACGATTTAGATGTACCA
CCTTTGGAGTGAAAAATGACTGAAGAGGAATTCTGGTCAAAACCTTCGAA
ATTTACTCCTCAAAGTCGCGTTGAAGCTCACCATTTCATGGAAGAAAAAC
GGAAAGAAAAAGAGGAAACTAAGAAAACCGATTTTCCCGATTTAAGAAAT
TCGTTACAAAGAACAATCCGATTTTTCACTGATGATGGAAGACCGTTGAA
TATTAACCAGGATAAAATCGATTTTGAATTTCAAGAGAATGATGACTTCA
CGGGCTACGTTTTGGATGTGGCGTGTTACAAACATTTAGATGGTGCAAAT
TACTGAAGATCTGATTCGAAAACGATCTGAGCATAACGATTGTGAAATCA
CAACACTCGAAGAAATTTCACTTCATCAATGTGACATTGAACGTTTGGAA
TACATTGGGAAGTGGTGTCGAGACTTGAAAATCTTATACCTACAATCTAA
CTTGATTCCCAAAATTGAGAACATTCACCAACTAAAGAAATTAGAGTATT
TGAATTTGGCTTTGAATAATATCTTGGTTATTGAGAATCTGAAAGGGTGC
GAGTCGCTGAAGAAACTTGATCTAACTGTTAACTTCGTTGGTAAAATCAC
CTCTATCGAGTCACTCAAAGGAAATGAATTTTTACGGGACATGTATTTAA
CGGGTAACCCTTGTACGGAATATGTGGGTTATCGAGACTATGTAATTGCG
ACATTGCCTCAGTTAACCAGTTTAGATGGTACACCGGTATCCAAGTCTGA
ACGCATAAAGGCGAACCAGAAATTGACCGAACTGAGGTGCGATATGTTGA
GACAAGAGAAAATATATATGGCTAAACAAGACAAAGAGCAAGAAATTGAG
GAAATCGAGACAAACGGCGTCAAAAAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059073-exon-scaffold_316-1575043694:179262..179359 | TCONS_00059073-exon-scaffold_316-1575043694:179262..179359 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1575043694:177262..177896 | TCONS_00059073-exon-scaffold_316-1575043694:177262..177896 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1575043694:176273..176549 | TCONS_00059073-exon-scaffold_316-1575043694:176273..176549 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1575043694:172840..174532 | TCONS_00059073-exon-scaffold_316-1575043694:172840..174532 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1510915933:179262..179359 | TCONS_00059073-exon-scaffold_316-1510915933:179262..179359 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1510915933:177262..177896 | TCONS_00059073-exon-scaffold_316-1510915933:177262..177896 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1510915933:176273..176549 | TCONS_00059073-exon-scaffold_316-1510915933:176273..176549 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1510915933:172840..174532 | TCONS_00059073-exon-scaffold_316-1510915933:172840..174532 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1491911889:179262..179359 | TCONS_00059073-exon-scaffold_316-1491911889:179262..179359 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1491911889:177262..177896 | TCONS_00059073-exon-scaffold_316-1491911889:177262..177896 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1491911889:176273..176549 | TCONS_00059073-exon-scaffold_316-1491911889:176273..176549 | Clytia hemisphaerica | exon |
| TCONS_00059073-exon-scaffold_316-1491911889:172840..174532 | TCONS_00059073-exon-scaffold_316-1491911889:172840..174532 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_316 | supercontig | scaffold_316:172840..179359 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00059073 vs. Swiss-Prot (Human)
Match: TILB (Protein tilB homolog OS=Homo sapiens GN=LRRC6 PE=1 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 1.201e-63 Identity = 109/174 (62.64%), Postives = 138/174 (79.31%), Query Frame = 2
Query: 143 MVQITEDLIRKRSEHNDCEITTLEEISLHQCDIERLEYIGKWCRDLKILYLQSNLIPKIENIHQLKKLEYLNLALNNILVIENLKGCESLKKLDLTVNFVGKITSIESLKGNEFLRDMYLTGNPCTEYVGYRDYVIATLPQLTSLDGTPVSKSERIKANQKLTELRCDMLRQEK 664
M ITEDLIR+ +EHNDC I +LEE+SLHQ +IERLE+I KWCRDLKILYLQ+NLI KIEN+ +LKKLEYLNLALNNI IENL+GCE L KLDLTVNF+G+++SI++L+ N L++++L GNPC + YR++V+ATLPQL LDG + SERIKA Q + + + QEK
Sbjct: 1 MGWITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVSKLKKLEYLNLALNNIEKIENLEGCEELAKLDLTVNFIGELSSIKNLQHNIHLKELFLMGNPCASFDHYREFVVATLPQLKWLDGKEIEPSERIKALQDYSVIEPQIREQEK 174
The following BLAST results are available for this feature:
|
