TCONS_00060642 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060642
Unique NameTCONS_00060642
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2262

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060642 ID=TCONS_00060642|Name=TCONS_00060642|organism=Clytia hemisphaerica|type=transcript|length=2262bp
CAACACTAGATCACAGCTGTGTACTTTGCATAATTATATTCGAGCCTGTC
GATTGGTTGTTTTGGATAATTATACCAACTTTCCTATATCAATTTTTGCC
TAGAACTTTGAAGACACTGGAAAACTTGTAAAAGGAAAAATGGCGTCGGA
CCAAGAGACAGATGCTGAAATGATCAAAGAATGTGAAGATTATGTCAGCA
AACACAACATTCAAGTTCTCTTAAAAGATGCTATTGTACAAATTTGTATC
AACAAACCAGATAAACCATATAAATTTCTCAGGGAACACTTTGAGAAGCT
AgaaaagGAGGAAGCTAAAAGTCTTGGTGTTGACGAGCCAGAAGCAGTAA
TACAAGGACCACCACCCTCAGCCACTCAAAGGAGGCGTAGAGGTGCTGTC
AGTGCAGCTGTCATCTCAGAAGAAGATGCCGCTTCTTATGTTAAAAAGGT
CATTCCCAAAGATTACAAAACCATGGCAGCTTTATCAAAAGCCATTGAGA
AGAATGTCTTGTTTTCACACTTAGACGATTCCGAACGAAGTGATATTTTC
GATGCAATGTTTATGGTAAAGCACAGCGAAGGAGAGGTCATCATTAACCA
AGGAGATGAAGGAGATAACTTCTATATCATTGACCATGGTGATGTTGAGG
TTTACGTAAACGATCAACTTGTTGTGAGTATTTCTCCTGGAGGAAGTTTC
GGTGAATTAGCTCTCATCTATGGGACACCTCGAGCTGCTACTGTTAAGGC
AAAAACAGACGTCAAATTATGGGCAATCGATCGAGTGACATACCGTCGTA
TTTTGATGGGTAGCACAatgcgaaaacgaaagatgtACGAGCAGTTCTTG
GAGAAAGTTTCCATCTTGGAATCTCTGGACAAATGGGAAAGATTGACAGT
GTGCGATGCATTGGAACCATGTAGTTTTGACGACGGCGAAGAGATTGTGA
TTCAAGGACAACCTGGGGATGATTTCTTCATCATTGTCGAGGGCACGGCG
ACTGTCTTGCAACGACGTACAGAAACGGACGATCCAATTGAAGTCAGCCG
ACTCGGCCTCTCCGACTATTTCGGTGAAATTGCTTTGGTTCTAAACCGAC
CCCGTGCGGCCACAGTCGTTGCACAGGGCCAATTGAAATGCGTCAAACTG
GATCGTCAACGTTTTGAACGTGTCCTGGGCCCTTGTGTCGATATTCTGCG
TCGAAACATTCAACAGTACAACAGTTTTGTGTCGTTGGTAGTGTAATGCT
TCGTGGTGAAGTGTAGTGTAAGGaagaaaaagactttatttAAGACTATT
ATGGATGCACAATGTTTGCAAGTAAAGTGCAGCAGAAGGAGAACTAAAGT
ATCCTAAATTATGAAGAACTTTTTAAACTACTACTTATTAGAGAAGATGA
AGGGACTAGTTTGGAAATAAACCTTTTATCATCTTTTTCTACGGCTGCCA
TTTTGAAAGTGAAGATGGGTTCTTCCGTGGTGTATTCCTTTACTAGAGTT
TCTTTAGAAATCAATGTTTTGAATCACTTAAGGGATCTTTTCTAGAGGAA
GCTATACTGAGTTCTGCATGTGGCTCAAATGGCTTTTATTGTCATTTTTG
AATTGTTAAAGGTTAAAGGTATGCCTCGTCAACCATCATGAACCATAATG
GCTACCCTAGATAAAAgctttgaaaaaggtttattattaatATGGATGGG
GTATGAACTAAACCCAATTAAAATATCGCTGGATAGTagttaattatttt
taaattaaaaaaatttattgatttGAATGATATAATTAGGTGAcaatctt
tttgaattattttttgctttttttttgcctcttgttaattttcttttatt
gtcgttcataaaaggttttgtttttagataagagtgatatcgtttgctta
ctcgtcaatttcaattcacaagctttttcgcattagattgacacatatgt
ggagcaatattggtcagaaagaggaaaagatcagcataataaaaaataac
agcataatataacaataggcagacactgtctagatatgaaatatgtgtct
gctatgaaacgagaacacttatgtaaaaataaaacctttaaagctaTACT
TTGTCTTTTTCGATGGTCATTTATCTTGGTGAAgtgattttgagatttta
gattttatgaaGTCTGGATCTCCATCAGATCTAATGTTTGCTCCTCGTTA
GTATGCACCTATCAGCCTTTAAAGCATGAAAAGACTGTGTTCGAttttat
tacacgtttttt
Run BLAST on NCBI

protein sequence of TCONS_00060642-protein

>TCONS_00060642-protein ID=TCONS_00060642-protein|Name=TCONS_00060642-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MASDQETDAEMIKECEDYVSKHNIQVLLKDAIVQICINKPDKPYKFLREH
FEKLEKEEAKSLGVDEPEAVIQGPPPSATQRRRRGAVSAAVISEEDAASY
VKKVIPKDYKTMAALSKAIEKNVLFSHLDDSERSDIFDAMFMVKHSEGEV
IINQGDEGDNFYIIDHGDVEVYVNDQLVVSISPGGSFGELALIYGTPRAA
TVKAKTDVKLWAIDRVTYRRILMGSTMRKRKMYEQFLEKVSILESLDKWE
RLTVCDALEPCSFDDGEEIVIQGQPGDDFFIIVEGTATVLQRRTETDDPI
EVSRLGLSDYFGEIALVLNRPRAATVVAQGQLKCVKLDRQRFERVLGPCV
DILRRNIQQYNSFVSLVV
Run BLAST on NCBI

transcript from alignment at scaffold_348:380967..391922+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060642 ID=TCONS_00060642|Name=TCONS_00060642|organism=Clytia hemisphaerica|type=transcript|length=10956bp|location=Sequence derived from alignment at scaffold_348:380967..391922+ (Clytia hemisphaerica)
CAACACTAGATCACAGCTGTGTACTTTGCATAATTATATTCGAGCCTGTC
GATTGGTTGTTTTGGATAATTATACCAACTTTCCTATATCAATTTTTGCC
TAGAACTTTGAAGACACTGGAAAACTTGTAAAAGGAAAAATGGCGTCGGA
CCAAGAGACAGATGCTGAAATGATCAAAGAATGTGAAGATTATGTCAGCA
AACACAACATTCAAGTTCTCTTAAAAGATGCTATTGTACAAATTTGTATC
AACAAACCAGATAAACCATATAAATTTCTCAGGGAACACTTTGAGAAGCT
AgaaaaggtataccttttttgtttgtttacaaattgaGTTTTGTCAGTTT
TTCACCATGATTGCCATTTTTCTCAGATTATCTACCTGAAACATTGATTT
CATTTCTCTATGTGTTTTGATACTTAAAAAATCATAACTAAACATTCTAT
TTCTGGCTTTGATTCTCATTAAAAGTCCAGAAAGTTTACTTCTACACCAC
TTGTGCTTTTGTCCTGCCAGAAGTCACTGTCAAACAGACGAGTCCCCCTG
CCCAGTTGACGAACAGTCTCGTTTGTGGACAATGATTTTGAACCCAAAAT
AGTCATACAAAAAAACCTTTCAGTAGTTATCTTCCATATAGACCTATTTG
CCatacagttagtcacactaggaaatcaagcttatcagaaaaaacaacat
aacaGTCATCTAAAgaatgtatttgcaacaacaagaatAATATATTTACC
TGAACCAAGTTGAAgctcccaagacaattaattagaACTTGAAAacctaa
aataaacaaaataaacgattgcgaacgtgcagcagccagaatatcaacca
actaaattttgtcattcaattcccaagacagcgcttcgatttttagaCCT
TGTTTATACGCTGGATTAAAATAATTCCGCACTTGTAAATgtgtcagtgt
ttgaggtctgACAAAAAAAGCGaagggttattttttcatgaattccttta
gaagttttgcggcgcaatTTTTGCTTGCCAGTCAAGTAAACAATATattg
cttttgcagcattaagagccattttttttaaaaatcttcagaataaagaa
agtgtgatacctcaccctcttagattttgatgaaattttgaccaaatgat
ccatcacacAAGANCAATATattgcttttgcagcattaagctttgatacg
cattttggtaGGACGCTAGTTTAAACTTAAATCTTCATACACAAATTAGG
GGAAACACATGTTttgactttgtaccctatgctgcatgCAAGCATAAACT
TGCACAAATATTGTGTCTACtgtagtattccttttgcagcaaaattttac
gtttgtgtcaggttgaaatttgagaaatttatatgggtatatggggggaa
ctgatattttaagaattttctgcgggaaagcaaaaaagatcgGGGAAACC
AGGGGGGGGTaccaagtcagtgtactggaccattgatttttgtatttttt
tccaaaaaattagaccaccaccctttttggtacactgtactaactttttt
tcacggtcggggctttaacaccacccttttagtacactttactaactttt
ttttcacGGTCAGGattttgacaccacccttttagtacactctaactttc
ttccacagccggagctttgataccacccttttagtacactgtactgacgT
TTTTCCACAACTAGATTTTTATTACCACGctttcagtacactgtactgac
ttCTCCATGACATGATTTTTTATACTACCCtattagtacactgtactagc
tgttttttcgatcagataagttttgaaaccaccccttatagtgcactgtt
CTAATTTCTTCTTAGCCAGATAAGTTTAATTGCCACCATATACAAAGGTT
TTTAAGTATTTTGCTAAGAAAAgcaccaaattatataaaaggaaagattt
gaatattaaaatacTTGAATCTTTATATAGTACAAacactgaaacaatga
aacagacaaagcaaagtcaatcaaataCAGTGAAACTAGCTGAAATTAGC
ACGTCAAAACACTCAAAACCAACTTTGAGTTATTTCCCTTCTTGTGACTT
GTTTCTGGTTGTCTGGCAAGCTGtagcagtttttctttttagaaaaataa
aaataaaagacttaataacattgtacacaaactgaaatggaaaatctttt
atcaaatgtaatattatacaaaatatataaaaaggtgCTTTCCCTGTANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNgggcactccaggtaagtgacctaccggacgtgcggc
ccttaagggtaggttttttggactttggaaagtgcactgtaagggtgtaa
aattttataaaataccaaattaggtcaaatttgagaaatttcaaaacatt
ttgccctgaaaagggcaaaaaatttgtaaaaattacactataagggtcga
tcttcagccaaattttcctgcactgtaagggaccgattttagagacctga
tttttggccgaatgtacggtcgttttcaccccctccccccccggtgattt
cacttatatacagatttttttctcaattaaCATCAATCCAACAAGGTTac
taaaaaacataaaacaatagagTTTTTATAAGACTTGAAAGCTTCGATTC
GAACGTTTACACATTCAAATTCTTGTTGTTGCCATAATGTAGATAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTgtgttagaatgagaaaaa
cttgttttcattttcaggagtctaaagtgtggtacataatataagtgatt
aataagaggaatgttctttgaataaaaaaatccaCAGATTTTGTTTAGTG
TCCCTTGTATGCAGTATCCTATGCATAGAAACTTCTTGCATTTTTACTGA
TTgccaatttagggggggggttggttccccctttttcagaaaaatcggga
ttttcaagttggtatcgataccaatttaggggggtgggtccccccttttt
tagaaaattggggttttcaagttggtattgataccaatttagggggtggt
ggtgtctgctactttcaaatctcgaaaagtcaggtttttgggccctgggt
tggtatcctggaccTTGACCCCCCCTGCAATGTACTCACTTCTCAGTGTG
TATcaatactaactttttcattgtatttttctcagaggaccaccctttta
ttagactgtactaactttttcattgtatttttctcagacgaccacccttt
tagtacactgtactaacactcaatttaatctaaaaaatacaccaccccac
cagctatgggccagtacactgactcgatcccccccccccctggggaaact
aaaaaactgaaaagccatagggggaaaaaaagagggggaagATTTACAAA
AATCAAGAAGTTGgtgggggaacaaaccctggaggacactatgaagactt
gcatcagtggatgctaacatgcatagccctcaaatgaatgacctggctgg
tcattaaattacaaagttaaataaaaacaaacctgatttacaaaatttgc
gGGTGGTAAAATGTATATCTCCTAATTATAAGTGATGTCATGCATAATTA
CGTTTCATATAATATATCTCTTATCTAGAGTACAATCCCCGCTTCTTAAA
TAAATTGAACTTCTGCAAACCAATTAAACAATGATTAAGCTGTCTCTATC
TTTACCAAATCCCACGTTTGACAAATTGAAATGCATTCGTCAAACATGGT
CTAATCGATTAATGATCAATGGATGTTTTGTGTCTATTATCAATCGAGAC
ACCTATTTTGTCCATACCGTCATTCCTGGAAAGTGCTGCATGACTTTATA
TTTCAGCATTTTATATATATTGAAATGAATGCAATATTCTCTACTGATTT
TTTCCTTTGAGAGAGCCTCTTAAACACTTTTTCGCTCTGTTATTTgattt
ttagcataaaaaagggcctgtaagaCGAAGTATTCAGACTttgaactttt
aattttttttgttcctTAATTGGAATCccaattgaatttttgaaatacgA
TTCTAAGAACTTTTCAAATAGGCAAACTTTGACATTGGATCAATAATAAT
TGATTGAAAATTGATAAGAGATGCTAAGGTGATTTAATTAGCTAACGATT
AATATCGATTATCCATCGAATTAAATAAATGATCGGTTTTATCAATTAAG
ACCATCTGGAAGAAGTTGCTCACTTTCATGGCAtcctccagctttttggt
ccccCCCCTAATATGAGCTAAAATTCCCCATCTGGCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACaagcctgaatgcc
caaacacaccaggaaggtctgtatttatcctattactccccccactaggt
agaggactgaatataacccctattcgcctttctcccctcatcaagcttga
aattttcacttcccccctggcaccaaaatctgattcccccccatcttcct
gggggggatgatcccatgactttcccgtggaaataatatatgtttttcag
ttttttgggacccttggggcataagctaccctCGCGACCCTATGACATca
cagatttttgaaaaacgtgAAAATGGGATATCtcgagtcgagtttgaaaa
ttgggaagtcgttgacccctcattggatgaAGGATATGAGATGGCTTTAA
TTAAAGTGACTTTGAAATCTAGCTATAAAATTTTTGGGCGTTTTCACTTG
GTGTCATCAAAATagtctcgagattggaaaggagttggAAGATAATTTGA
CCCCCTATTCAATCAGAAATTTTAAGGAGAAAAGGTCAGGGTAGACTGCG
CGCATTCTCGGAGttgattttgatatagaaaATACCTAACATGTATGAAA
TTCTTGTTCgagagttaccccaaatttggggtaacaAAAGGTTGCATGAG
CTTATAATTTTGTcacatcaaatcaaagaaagaaaaaagtcatTGTGTTG
TTGCTTTCATAATTATAAGTCTTTattcattgaacaaagaaaaaaagaag
tcattgtattgctatgacacataatcaaaaaagaaaaaagaaaagacagg
GGTTAGTTGGGACAGAAATATTATAGACAATATATATCCCCTATATGAGA
TATATACATATTCAGCGTATCCCGTTTAGGCTAGATCCTTCTGTCAAAAT
ATCAGTTCAATTAATTGATTGGATCCAATTGATTGAGTCTGGTCTGGCaa
ttttttatccttttatatCTTGCAGGTTAAAACTAAGACTTATTTACAAT
TGTCATTTTCTATTTGAAGAAAGTTTTACTTTTGTCTTTTNTTATTTACA
ATTGTCATTTTCTATTTGAAGAAAGTTTTGCTTTTGTCTTTTGTTTACAG
GAGGAAGCTAAAAGTCTTGGTGTTGACGAGCCAGAAGCAGTAATACAAGG
ACCACCACCCTCAGCCACTCAAAGGAGGCGTAGAGGTGCTGTCAGTGCAG
CTGTCATCTCAGAAGAAGATGCCGCTTCTTATGTTAAAAAGGTTTGGAAA
GAATTTAATATTTGATTGAGTCTAAGATCAGCTAGAGTTGTGTAGTTAAC
TTATTACCTTAAGCTTTCCCTCAATTTTGACAAAAGTTAGTAGGAAATCA
ATTTGGGGCTTTCCTTTGATGTCAGTGCAATGTCCTCCTTCTATCTTTTC
AATCAAAGGATTCAAACTGGCAACTCTCTGTTGATTTTCTAGGCTGTCCA
AATTAGGTCCTTCGAGGTCTATTTCATCACTCAATAGGTAGCTCTCAAAT
TGATATTGATTTTAAGGTCCTCTCTTTTTTGTAGCCtctctttttttata
tatatggtgaagatcagagatctgacctcaaggagagaaagtgttgaaaa
tactaaataaaataaagatgaaacataaaaaggcactaatatttttataa
ttatatgtttttttccatttttttgaatttttgtaaatatataaatcaaa
ccaatcaaacatcctgtcaagaaatgagTTTTAAAAATCAATCTTTTCAG
CTATGCTCGCTTGCCTGAGATGCACTAATGAAGGAAGGACAAGAACATGT
CTTGGATAGAAAATTATCATTtaataaactttttcaaatattgaatTTAG
GTCATTCCCAAAGATTACAAAACCATGGCAGCTTTATCAAAAGCCATTGA
GAAGAATGTCTTGTTTTCACACTTAGACGATTCCGAACGAAGGTAAACAG
ACACTCGATTATCCACTTTCCTTGTTGTAGTTTTTTATCTGACCATCTTT
AACTCAACCCTTTATAGctcgaatgtctctttaaaCTCGAAGTTTTCTCG
TCTCTCAAGTTAAgataacaatgccttataaaccttactccataactcaa
aactcctttaatttgaacaaatttgtgttcctggTACGTGTTAGAGTTAT
AGAAACTCCATTGTATTGGTTGTTTTCTTCAACAGTGATATTTTCGATGC
AATGTTTATGGTAAAGCACAGCGAAGGAGAGGTCATCATTAACCAAGGAG
ATGAAGGAGATAACTTCTATATCATTGACCATGGTGATGTTGAGGTATGA
AAGATTTGTTCTCCTCCCCTCTTTTTATATTCTCCACTCTTGgtagtttt
cttttgtttttagggTCAATTTGTCATATAGAGATTTTTTATGTTTGGTT
TCATAATTTCTGCGGCAAACGTTTGAATCTGTGGAggcgatccctttcgt
gcatcGAACGTTctcttccataatggcggaagttaTGTAACTTGAAAAAA
CCCTCCTAATATGAAATATTGGGTTTGTTTTCTGTCCCAACTGCTACTCA
ATAAATCTTGGTCTCTTGAGATATTGCACCCAGGTGCACTAAAACTGTAC
TAAAGAATCTGTACTAAAACTCAAATTTCGGTTTTATGAACGACCTTAGA
ATAAGtccaaaagttttaaatatcCAAACTGTTTCCTTTACATTTCTGCT
CTTgctataaatataaaaaagttcTTCTCAATTTTTATCCCTTATATTTT
TAAGGTTTACGTAAACGATCAACTTGTTGTGAGTATTTCTCCTGGAGGAA
GTTTCGGTGAATTAGCTCTCATCTATGGGACACCTCGAGCTGCTACTGTT
AAGGTATCAGTCACTTTTTGATTTACCTACATAGATGTTCTGGTGCGCTA
GGTTTTTAGACTTTAGTTTACTAGATATATTCAGTTTTTCTGCTTGTTTC
agtctaatttcgatattcctTTTTATGAAGTTTTGATGTTACTTGGGCCT
ATCTTTTCCAAATTGCTATTGAAACCTGAATTAGAACATCTTTCTTTTCT
GTCTGGAGTTTTTTGGATAATAGCCTTTTGTTTCATCGTCAGAGGTGGGT
ACTTAGTTCAAGATTTCTGTTTCATTATTAGACTTTGCAGAATTCAAACC
ACATAATTATCTTCTCTTTAGGCAAAAACAGACGTCAAATTATGGGCAAT
CGATCGAGTGACATACCGTCGTATTTTGATGGGTAGCACAatgcgaaaac
gaaagatgtACGAGCAGTTCTTGGAGAAAGTTTCCATCTTGGAATCTCTG
GACAAATGGGAAAGATTGACAGTGTGCGATGCATTGGAACCATGTAGTTT
TGACGACGGCGAAGAGATTGTGATTCAAGGACAACCTGGGGATGATTTCT
TCATCATTGTCGAGGTAGATTGCTTTAATCTTTTACTCATTCATTCACTT
GTAATTTTGAGGGTTTTAATTCTTATACTTCAGTGTTAAGAGTTGTCTCA
GCTAAGTATATAAAAAGGCTTTTCCATCTCAAAATTCTCTATAATTCACT
AATTTATGTGATGTTCGTGCTGTGTTTTTCTTGGCGAACAACCAGTCAAC
TAAACACTGACATTGCTCTTCATTTTCAGGGCACGGCGACTGTCTTGCAA
CGACGTACAGAAACGGACGATCCAATTGAAGTCAGCCGACTCGGCCTCTC
CGACTATTTCGGTAGGATGTTTTTTCCTTCTTTCTAATGAGATTTTTTGG
TTGcttctttgaagaatatttttgtgtAAATTTATTTGTAAACCTCTGGA
CACCTGTATCACCCCCTGAAATAAGCACCTAATTGACTCATTTAACATTG
CAACCCCTAGGGCAGTAAATCTTAAGGCTTTTCAATACTCCAAAACAAGA
TGTCAtcctaacctttttttaaaatttgctTTCTTAAAGTCCcgtttttc
aaaatgataatttttgacagaaaatttgatttttcatcgaTTGATCCTCA
ACTTTTTTGATTCTCAGGTGAAATTGCTTTGGTTCTAAACCGACCCCGTG
CGGCCACAGTCGTTGCACAGGGCCAATTGAAATGCGTCAAACTGGATCGT
CAACGTTTTGAACGTGTCCTGGGCCCTTGTGTCGATATTCTGCGTCGAAA
CATTCAACAGTACAACAGTTTTGTGTCGTTGGTAGTGTAATGCTTCGTGG
TGAAGTGTAGTGTAAGGaagaaaaagactttatttAAGACTATTATGGAT
GCACAATGTTTGCAAGTAAAGTGCAGCAGAAGGAGAACTAAAGTATCCTA
AATTATGAAGAACTTTTTAAACTACTACTTATTAGAGAAGATGAAGGGAC
TAGTTTGGAAATAAACCTTTTATCATCTTTTTCTACGGCTGCCATTTTGA
AAGTGAAGATGGGTTCTTCCGTGGTGTATTCCTTTACTAGAGTTTCTTTA
GAAATCAATGTTTTGAATCACTTAAGGGATCTTTTCTAGAGGAAGCTATA
CTGAGTTCTGCATGTGGCTCAAATGGCTTTTATTGTCATTTTTGAATTGT
TAAAGGTTAAAGGTATGCCTCGTCAACCATCATGAACCATAATGGCTACC
CTAGATAAAAgctttgaaaaaggtttattattaatATGGATGGGGTATGA
ACTAAACCCAATTAAAATATCGCTGGATAGTagttaattatttttaaatt
aaaaaaatttattgatttGAATGATATAATTAGGTGAcaatctttttgaa
ttattttttgctttttttttgcctcttgttaattttcttttattgtcgtt
cataaaaggttttgtttttagataagagtgatatcgtttgcttactcgtc
aatttcaattcacaagctttttcgcattagattgacacatatgtggagca
atattggtcagaaagaggaaaagatcagcataataaaaaataacagcata
atataacaataggcagacactgtctagatatgaaatatgtgtctgctatg
aaacgagaacacttatgtaaaaataaaacctttaaagctaTACTTTGTCT
TTTTCGATGGTCATTTATCTTGGTGAAgtgattttgagattttagatttt
atgaaGTCTGGATCTCCATCAGATCTAATGTTTGCTCCTCGTTAGTATGC
ACCTATCAGCCTTTAAAGCATGAAAAGACTGTGTTCGAttttattacacg
tttttt

Coding sequence (CDS) from alignment at scaffold_348:380967..391922+

>TCONS_00060642 ID=TCONS_00060642|Name=TCONS_00060642|organism=Clytia hemisphaerica|type=CDS|length=8856bp|location=Sequence derived from alignment at scaffold_348:380967..391922+ (Clytia hemisphaerica)
ATGGCGTCGGACCAAGAGACAGATGCTGAAATGATCAAAGAATGTGAAGA
TTATGTCAGCAAACACAACATTCAAGTTCTCTTAAAAGATGCTATTGTAC
AAATTTGTATCAACAAACCAGATAAACCATATAAATTTCTCAGGGAACAC
TTTGAGAAGCTAgaaaagGAGGAAGCTAAAAGTCTTGGTGTTGACGAGCC
AGAAGCAGTAATACAAGGACCACCACCCTCAGCCACTCAAAGGAGGCGTA
GAGGTGCTGTCAGTGCAGCTGTCATCTCAGAAGAAGATGCCGCTTCTTAT
GTTAAAAAGGTCATTCCCAAAGATTACAAAACCATGGCAGCTTTATCAAA
AGCCATTGAGAAGAATGTCTTGTTTTCACACTTAGACGATTCCGAACGAA
GTGATATTTTCGATGCAATGTTTATGGTAAAGCACAGCGAAGGAGAGGTC
ATCATTAACCAAGGAGATGAAGGAGATAACTTCTATATCATTGACCATGG
TGATGTTGAGGTTTACGTAAACGATCAACTTGTTGTGAGTATTTCTCCTG
GAGGAAGTTTCGGTGAATTAGCTCTCATCTATGGGACACCTCGAGCTGCT
ACTGTTAAGGCAAAAACAGACGTCAAATTATGGGCAATCGATCGAGTGAC
ATACCGTCGTATTTTGATGGGTAGCACAatgcgaaaacgaaagatgtACG
AGCAGTTCTTGGAGAAAGTTTCCATCTTGGAATCTCTGGACAAATGGGAA
AGATTGACAGTGTGCGATGCATTGGAACCATGTAGTTTTGACGACGGCGA
AGAGATTGTGATTCAAGGACAACCTGGGGATGATTTCTTCATCATTGTCG
AGGGCACGGCGACTGTCTTGCAACGACGTACAGAAACGGACGATCCAATT
GAAGTCAGCCGACTCGGCCTCTCCGACTATTTCGGTGAAATTGCTTTGGT
TCTAAACCGACCCCGTGCGGCCACAGTCGTTGCACAGGGCCAATTGAAAT
GCGTCAAACTGGATCGTCAACGTTTTGAACGTGTCCTGGGCCCTTGTGTC
GATATTCTGCGTCGAAACATTCAACAGTACAACAGTTTTGTGTCGTTGGT
AGTGTAAATGGCGTCGGACCAAGAGACAGATGCTGAAATGATCAAAGAAT
GTGAAGATTATGTCAGCAAACACAACATTCAAGTTCTCTTAAAAGATGCT
ATTGTACAAATTTGTATCAACAAACCAGATAAACCATATAAATTTCTCAG
GGAACACTTTGAGAAGCTAgaaaagGAGGAAGCTAAAAGTCTTGGTGTTG
ACGAGCCAGAAGCAGTAATACAAGGACCACCACCCTCAGCCACTCAAAGG
AGGCGTAGAGGTGCTGTCAGTGCAGCTGTCATCTCAGAAGAAGATGCCGC
TTCTTATGTTAAAAAGGTCATTCCCAAAGATTACAAAACCATGGCAGCTT
TATCAAAAGCCATTGAGAAGAATGTCTTGTTTTCACACTTAGACGATTCC
GAACGAAGTGATATTTTCGATGCAATGTTTATGGTAAAGCACAGCGAAGG
AGAGGTCATCATTAACCAAGGAGATGAAGGAGATAACTTCTATATCATTG
ACCATGGTGATGTTGAGGTTTACGTAAACGATCAACTTGTTGTGAGTATT
TCTCCTGGAGGAAGTTTCGGTGAATTAGCTCTCATCTATGGGACACCTCG
AGCTGCTACTGTTAAGGCAAAAACAGACGTCAAATTATGGGCAATCGATC
GAGTGACATACCGTCGTATTTTGATGGGTAGCACAatgcgaaaacgaaag
atgtACGAGCAGTTCTTGGAGAAAGTTTCCATCTTGGAATCTCTGGACAA
ATGGGAAAGATTGACAGTGTGCGATGCATTGGAACCATGTAGTTTTGACG
ACGGCGAAGAGATTGTGATTCAAGGACAACCTGGGGATGATTTCTTCATC
ATTGTCGAGGGCACGGCGACTGTCTTGCAACGACGTACAGAAACGGACGA
TCCAATTGAAGTCAGCCGACTCGGCCTCTCCGACTATTTCGGTGAAATTG
CTTTGGTTCTAAACCGACCCCGTGCGGCCACAGTCGTTGCACAGGGCCAA
TTGAAATGCGTCAAACTGGATCGTCAACGTTTTGAACGTGTCCTGGGCCC
TTGTGTCGATATTCTGCGTCGAAACATTCAACAGTACAACAGTTTTGTGT
CGTTGGTAGTGTAAATGGCGTCGGACCAAGAGACAGATGCTGAAATGATC
AAAGAATGTGAAGATTATGTCAGCAAACACAACATTCAAGTTCTCTTAAA
AGATGCTATTGTACAAATTTGTATCAACAAACCAGATAAACCATATAAAT
TTCTCAGGGAACACTTTGAGAAGCTAgaaaagGAGGAAGCTAAAAGTCTT
GGTGTTGACGAGCCAGAAGCAGTAATACAAGGACCACCACCCTCAGCCAC
TCAAAGGAGGCGTAGAGGTGCTGTCAGTGCAGCTGTCATCTCAGAAGAAG
ATGCCGCTTCTTATGTTAAAAAGGTCATTCCCAAAGATTACAAAACCATG
GCAGCTTTATCAAAAGCCATTGAGAAGAATGTCTTGTTTTCACACTTAGA
CGATTCCGAACGAAGTGATATTTTCGATGCAATGTTTATGGTAAAGCACA
GCGAAGGAGAGGTCATCATTAACCAAGGAGATGAAGGAGATAACTTCTAT
ATCATTGACCATGGTGATGTTGAGGTTTACGTAAACGATCAACTTGTTGT
GAGTATTTCTCCTGGAGGAAGTTTCGGTGAATTAGCTCTCATCTATGGGA
CACCTCGAGCTGCTACTGTTAAGGCAAAAACAGACGTCAAATTATGGGCA
ATCGATCGAGTGACATACCGTCGTATTTTGATGGGTAGCACAatgcgaaa
acgaaagatgtACGAGCAGTTCTTGGAGAAAGTTTCCATCTTGGAATCTC
TGGACAAATGGGAAAGATTGACAGTGTGCGATGCATTGGAACCATGTAGT
TTTGACGACGGCGAAGAGATTGTGATTCAAGGACAACCTGGGGATGATTT
CTTCATCATTGTCGAGGGCACGGCGACTGTCTTGCAACGACGTACAGAAA
CGGACGATCCAATTGAAGTCAGCCGACTCGGCCTCTCCGACTATTTCGGT
GAAATTGCTTTGGTTCTAAACCGACCCCGTGCGGCCACAGTCGTTGCACA
GGGCCAATTGAAATGCGTCAAACTGGATCGTCAACGTTTTGAACGTGTCC
TGGGCCCTTGTGTCGATATTCTGCGTCGAAACATTCAACAGTACAACAGT
TTTGTGTCGTTGGTAGTGTAAATGGCGTCGGACCAAGAGACAGATGCTGA
AATGATCAAAGAATGTGAAGATTATGTCAGCAAACACAACATTCAAGTTC
TCTTAAAAGATGCTATTGTACAAATTTGTATCAACAAACCAGATAAACCA
TATAAATTTCTCAGGGAACACTTTGAGAAGCTAgaaaagGAGGAAGCTAA
AAGTCTTGGTGTTGACGAGCCAGAAGCAGTAATACAAGGACCACCACCCT
CAGCCACTCAAAGGAGGCGTAGAGGTGCTGTCAGTGCAGCTGTCATCTCA
GAAGAAGATGCCGCTTCTTATGTTAAAAAGGTCATTCCCAAAGATTACAA
AACCATGGCAGCTTTATCAAAAGCCATTGAGAAGAATGTCTTGTTTTCAC
ACTTAGACGATTCCGAACGAAGTGATATTTTCGATGCAATGTTTATGGTA
AAGCACAGCGAAGGAGAGGTCATCATTAACCAAGGAGATGAAGGAGATAA
CTTCTATATCATTGACCATGGTGATGTTGAGGTTTACGTAAACGATCAAC
TTGTTGTGAGTATTTCTCCTGGAGGAAGTTTCGGTGAATTAGCTCTCATC
TATGGGACACCTCGAGCTGCTACTGTTAAGGCAAAAACAGACGTCAAATT
ATGGGCAATCGATCGAGTGACATACCGTCGTATTTTGATGGGTAGCACAa
tgcgaaaacgaaagatgtACGAGCAGTTCTTGGAGAAAGTTTCCATCTTG
GAATCTCTGGACAAATGGGAAAGATTGACAGTGTGCGATGCATTGGAACC
ATGTAGTTTTGACGACGGCGAAGAGATTGTGATTCAAGGACAACCTGGGG
ATGATTTCTTCATCATTGTCGAGGGCACGGCGACTGTCTTGCAACGACGT
ACAGAAACGGACGATCCAATTGAAGTCAGCCGACTCGGCCTCTCCGACTA
TTTCGGTGAAATTGCTTTGGTTCTAAACCGACCCCGTGCGGCCACAGTCG
TTGCACAGGGCCAATTGAAATGCGTCAAACTGGATCGTCAACGTTTTGAA
CGTGTCCTGGGCCCTTGTGTCGATATTCTGCGTCGAAACATTCAACAGTA
CAACAGTTTTGTGTCGTTGGTAGTGTAAATGGCGTCGGACCAAGAGACAG
ATGCTGAAATGATCAAAGAATGTGAAGATTATGTCAGCAAACACAACATT
CAAGTTCTCTTAAAAGATGCTATTGTACAAATTTGTATCAACAAACCAGA
TAAACCATATAAATTTCTCAGGGAACACTTTGAGAAGCTAgaaaagGAGG
AAGCTAAAAGTCTTGGTGTTGACGAGCCAGAAGCAGTAATACAAGGACCA
CCACCCTCAGCCACTCAAAGGAGGCGTAGAGGTGCTGTCAGTGCAGCTGT
CATCTCAGAAGAAGATGCCGCTTCTTATGTTAAAAAGGTCATTCCCAAAG
ATTACAAAACCATGGCAGCTTTATCAAAAGCCATTGAGAAGAATGTCTTG
TTTTCACACTTAGACGATTCCGAACGAAGTGATATTTTCGATGCAATGTT
TATGGTAAAGCACAGCGAAGGAGAGGTCATCATTAACCAAGGAGATGAAG
GAGATAACTTCTATATCATTGACCATGGTGATGTTGAGGTTTACGTAAAC
GATCAACTTGTTGTGAGTATTTCTCCTGGAGGAAGTTTCGGTGAATTAGC
TCTCATCTATGGGACACCTCGAGCTGCTACTGTTAAGGCAAAAACAGACG
TCAAATTATGGGCAATCGATCGAGTGACATACCGTCGTATTTTGATGGGT
AGCACAatgcgaaaacgaaagatgtACGAGCAGTTCTTGGAGAAAGTTTC
CATCTTGGAATCTCTGGACAAATGGGAAAGATTGACAGTGTGCGATGCAT
TGGAACCATGTAGTTTTGACGACGGCGAAGAGATTGTGATTCAAGGACAA
CCTGGGGATGATTTCTTCATCATTGTCGAGGGCACGGCGACTGTCTTGCA
ACGACGTACAGAAACGGACGATCCAATTGAAGTCAGCCGACTCGGCCTCT
CCGACTATTTCGGTGAAATTGCTTTGGTTCTAAACCGACCCCGTGCGGCC
ACAGTCGTTGCACAGGGCCAATTGAAATGCGTCAAACTGGATCGTCAACG
TTTTGAACGTGTCCTGGGCCCTTGTGTCGATATTCTGCGTCGAAACATTC
AACAGTACAACAGTTTTGTGTCGTTGGTAGTGTAAATGGCGTCGGACCAA
GAGACAGATGCTGAAATGATCAAAGAATGTGAAGATTATGTCAGCAAACA
CAACATTCAAGTTCTCTTAAAAGATGCTATTGTACAAATTTGTATCAACA
AACCAGATAAACCATATAAATTTCTCAGGGAACACTTTGAGAAGCTAgaa
aagGAGGAAGCTAAAAGTCTTGGTGTTGACGAGCCAGAAGCAGTAATACA
AGGACCACCACCCTCAGCCACTCAAAGGAGGCGTAGAGGTGCTGTCAGTG
CAGCTGTCATCTCAGAAGAAGATGCCGCTTCTTATGTTAAAAAGGTCATT
CCCAAAGATTACAAAACCATGGCAGCTTTATCAAAAGCCATTGAGAAGAA
TGTCTTGTTTTCACACTTAGACGATTCCGAACGAAGTGATATTTTCGATG
CAATGTTTATGGTAAAGCACAGCGAAGGAGAGGTCATCATTAACCAAGGA
GATGAAGGAGATAACTTCTATATCATTGACCATGGTGATGTTGAGGTTTA
CGTAAACGATCAACTTGTTGTGAGTATTTCTCCTGGAGGAAGTTTCGGTG
AATTAGCTCTCATCTATGGGACACCTCGAGCTGCTACTGTTAAGGCAAAA
ACAGACGTCAAATTATGGGCAATCGATCGAGTGACATACCGTCGTATTTT
GATGGGTAGCACAatgcgaaaacgaaagatgtACGAGCAGTTCTTGGAGA
AAGTTTCCATCTTGGAATCTCTGGACAAATGGGAAAGATTGACAGTGTGC
GATGCATTGGAACCATGTAGTTTTGACGACGGCGAAGAGATTGTGATTCA
AGGACAACCTGGGGATGATTTCTTCATCATTGTCGAGGGCACGGCGACTG
TCTTGCAACGACGTACAGAAACGGACGATCCAATTGAAGTCAGCCGACTC
GGCCTCTCCGACTATTTCGGTGAAATTGCTTTGGTTCTAAACCGACCCCG
TGCGGCCACAGTCGTTGCACAGGGCCAATTGAAATGCGTCAAACTGGATC
GTCAACGTTTTGAACGTGTCCTGGGCCCTTGTGTCGATATTCTGCGTCGA
AACATTCAACAGTACAACAGTTTTGTGTCGTTGGTAGTGTAAATGGCGTC
GGACCAAGAGACAGATGCTGAAATGATCAAAGAATGTGAAGATTATGTCA
GCAAACACAACATTCAAGTTCTCTTAAAAGATGCTATTGTACAAATTTGT
ATCAACAAACCAGATAAACCATATAAATTTCTCAGGGAACACTTTGAGAA
GCTAgaaaagGAGGAAGCTAAAAGTCTTGGTGTTGACGAGCCAGAAGCAG
TAATACAAGGACCACCACCCTCAGCCACTCAAAGGAGGCGTAGAGGTGCT
GTCAGTGCAGCTGTCATCTCAGAAGAAGATGCCGCTTCTTATGTTAAAAA
GGTCATTCCCAAAGATTACAAAACCATGGCAGCTTTATCAAAAGCCATTG
AGAAGAATGTCTTGTTTTCACACTTAGACGATTCCGAACGAAGTGATATT
TTCGATGCAATGTTTATGGTAAAGCACAGCGAAGGAGAGGTCATCATTAA
CCAAGGAGATGAAGGAGATAACTTCTATATCATTGACCATGGTGATGTTG
AGGTTTACGTAAACGATCAACTTGTTGTGAGTATTTCTCCTGGAGGAAGT
TTCGGTGAATTAGCTCTCATCTATGGGACACCTCGAGCTGCTACTGTTAA
GGCAAAAACAGACGTCAAATTATGGGCAATCGATCGAGTGACATACCGTC
GTATTTTGATGGGTAGCACAatgcgaaaacgaaagatgtACGAGCAGTTC
TTGGAGAAAGTTTCCATCTTGGAATCTCTGGACAAATGGGAAAGATTGAC
AGTGTGCGATGCATTGGAACCATGTAGTTTTGACGACGGCGAAGAGATTG
TGATTCAAGGACAACCTGGGGATGATTTCTTCATCATTGTCGAGGGCACG
GCGACTGTCTTGCAACGACGTACAGAAACGGACGATCCAATTGAAGTCAG
CCGACTCGGCCTCTCCGACTATTTCGGTGAAATTGCTTTGGTTCTAAACC
GACCCCGTGCGGCCACAGTCGTTGCACAGGGCCAATTGAAATGCGTCAAA
CTGGATCGTCAACGTTTTGAACGTGTCCTGGGCCCTTGTGTCGATATTCT
GCGTCGAAACATTCAACAGTACAACAGTTTTGTGTCGTTGGTAGTGTAAA
TGGCGTCGGACCAAGAGACAGATGCTGAAATGATCAAAGAATGTGAAGAT
TATGTCAGCAAACACAACATTCAAGTTCTCTTAAAAGATGCTATTGTACA
AATTTGTATCAACAAACCAGATAAACCATATAAATTTCTCAGGGAACACT
TTGAGAAGCTAgaaaagGAGGAAGCTAAAAGTCTTGGTGTTGACGAGCCA
GAAGCAGTAATACAAGGACCACCACCCTCAGCCACTCAAAGGAGGCGTAG
AGGTGCTGTCAGTGCAGCTGTCATCTCAGAAGAAGATGCCGCTTCTTATG
TTAAAAAGGTCATTCCCAAAGATTACAAAACCATGGCAGCTTTATCAAAA
GCCATTGAGAAGAATGTCTTGTTTTCACACTTAGACGATTCCGAACGAAG
TGATATTTTCGATGCAATGTTTATGGTAAAGCACAGCGAAGGAGAGGTCA
TCATTAACCAAGGAGATGAAGGAGATAACTTCTATATCATTGACCATGGT
GATGTTGAGGTTTACGTAAACGATCAACTTGTTGTGAGTATTTCTCCTGG
AGGAAGTTTCGGTGAATTAGCTCTCATCTATGGGACACCTCGAGCTGCTA
CTGTTAAGGCAAAAACAGACGTCAAATTATGGGCAATCGATCGAGTGACA
TACCGTCGTATTTTGATGGGTAGCACAatgcgaaaacgaaagatgtACGA
GCAGTTCTTGGAGAAAGTTTCCATCTTGGAATCTCTGGACAAATGGGAAA
GATTGACAGTGTGCGATGCATTGGAACCATGTAGTTTTGACGACGGCGAA
GAGATTGTGATTCAAGGACAACCTGGGGATGATTTCTTCATCATTGTCGA
GGGCACGGCGACTGTCTTGCAACGACGTACAGAAACGGACGATCCAATTG
AAGTCAGCCGACTCGGCCTCTCCGACTATTTCGGTGAAATTGCTTTGGTT
CTAAACCGACCCCGTGCGGCCACAGTCGTTGCACAGGGCCAATTGAAATG
CGTCAAACTGGATCGTCAACGTTTTGAACGTGTCCTGGGCCCTTGTGTCG
ATATTCTGCGTCGAAACATTCAACAGTACAACAGTTTTGTGTCGTTGGTA
GTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038138XLOC_038138Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060642-exon-scaffold_348-1491911889:380967..381273TCONS_00060642-exon-scaffold_348-1491911889:380967..381273Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1510915933:380967..381273TCONS_00060642-exon-scaffold_348-1510915933:380967..381273Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1575043694:380967..381273TCONS_00060642-exon-scaffold_348-1575043694:380967..381273Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1491911889:387817..387957TCONS_00060642-exon-scaffold_348-1491911889:387817..387957Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1510915933:387817..387957TCONS_00060642-exon-scaffold_348-1510915933:387817..387957Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1575043694:387817..387957TCONS_00060642-exon-scaffold_348-1575043694:387817..387957Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1491911889:388567..388658TCONS_00060642-exon-scaffold_348-1491911889:388567..388658Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1510915933:388567..388658TCONS_00060642-exon-scaffold_348-1510915933:388567..388658Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1575043694:388567..388658TCONS_00060642-exon-scaffold_348-1575043694:388567..388658Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1491911889:388902..389010TCONS_00060642-exon-scaffold_348-1491911889:388902..389010Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1510915933:388902..389010TCONS_00060642-exon-scaffold_348-1510915933:388902..389010Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1575043694:388902..389010TCONS_00060642-exon-scaffold_348-1575043694:388902..389010Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1491911889:389471..389569TCONS_00060642-exon-scaffold_348-1491911889:389471..389569Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1510915933:389471..389569TCONS_00060642-exon-scaffold_348-1510915933:389471..389569Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1575043694:389471..389569TCONS_00060642-exon-scaffold_348-1575043694:389471..389569Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1491911889:389888..390130TCONS_00060642-exon-scaffold_348-1491911889:389888..390130Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1510915933:389888..390130TCONS_00060642-exon-scaffold_348-1510915933:389888..390130Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1575043694:389888..390130TCONS_00060642-exon-scaffold_348-1575043694:389888..390130Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1491911889:390346..390427TCONS_00060642-exon-scaffold_348-1491911889:390346..390427Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1510915933:390346..390427TCONS_00060642-exon-scaffold_348-1510915933:390346..390427Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1575043694:390346..390427TCONS_00060642-exon-scaffold_348-1575043694:390346..390427Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1491911889:390734..391922TCONS_00060642-exon-scaffold_348-1491911889:390734..391922Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1510915933:390734..391922TCONS_00060642-exon-scaffold_348-1510915933:390734..391922Clytia hemisphaericaexon
TCONS_00060642-exon-scaffold_348-1575043694:390734..391922TCONS_00060642-exon-scaffold_348-1575043694:390734..391922Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060642-proteinTCONS_00060642-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:380967..391922 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
75.7077	76.2705	63.0623	63.7449	158.632	124.205	176.539	187.301	145.652	145.186	111.455	132.86	103.437	102.24	79.0019	93.2477	139.405	144.986	113.821	129.404	127.216	127.135	80.4447	93.3654	102.027	104.966	98.9994	83.2494	77.8728	75.2753
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003117cAMP_dep_PK_reg_su_I/II_a/b
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll
IPR012198cAMP_dep_PK_reg_su
IPR018488cNMP-bd_CS
IPR018490cNMP-bd-like
Vocabulary: Cellular Component
TermDefinition
GO:0005952cAMP-dependent protein kinase complex
Vocabulary: Biological Process
TermDefinition
GO:0001932regulation of protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0008603cAMP-dependent protein kinase regulator activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001932 regulation of protein phosphorylation
cellular_component GO:0005952 cAMP-dependent protein kinase complex
molecular_function GO:0008603 cAMP-dependent protein kinase regulator activity
Blast
[Close]
BLAST of TCONS_00060642 vs. Swiss-Prot (Human)
Match: KAP0 (cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Homo sapiens GN=PRKAR1A PE=1 SV=1)

HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0
Identity = 262/373 (70.24%), Postives = 307/373 (82.31%), Query Frame = 2 
Query:  134 GKMASDQETDAEMIKECEDYVSKHNIQVLLKDAIVQICINKPDKPYKFLREHFEKLEKEEAKSLG--------VDEPEAVIQGPPPSAT--QRRRRGAVSAAVISEEDAASYVKKVIPKDYKTMAALSKAIEKNVLFSHLDDSERSDIFDAMFMVKHSEGEVIINQGDEGDNFYIIDHGDVEVYVNDQLVVSISPGGSFGELALIYGTPRAATVKAKTDVKLWAIDRVTYRRILMGSTMRKRKMYEQFLEKVSILESLDKWERLTVCDALEPCSFDDGEEIVIQGQPGDDFFIIVEGTATVLQRRTETDDPIEVSRLGLSDYFGEIALVLNRPRAATVVAQGQLKCVKLDRQRFERVLGPCVDILRRNIQQYN 1222
            G  A+ +E  A  ++ECE YV KHNIQ LLKD+IVQ+C  +P++P  FLRE+FE+LEKEEAK +          D  E  I  PPP+     RRRRGA+SA V +EEDAASYV+KVIPKDYKTMAAL+KAIEKNVLFSHLDD+ERSDIFDAMF V    GE +I QGDEGDNFY+ID G+ +VYVN++   S+  GGSFGELALIYGTPRAATVKAKT+VKLW IDR +YRRILMGST+RKRKMYE+FL KVSILESLDKWERLTV DALEP  F+DG++IV+QG+PGD+FFII+EG+A VLQRR+E ++ +EV RLG SDYFGEIAL++NRPRAATVVA+G LKCVKLDR RFERVLGPC DIL+RNIQQYN
Sbjct:    4 GSTAASEE--ARSLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFERLEKEEAKQIQNLQKAGTRTDSREDEISPPPPNPVVKGRRRRGAISAEVYTEEDAASYVRKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFSVSFIAGETVIQQGDEGDNFYVIDQGETDVYVNNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNIQQYN 374
The following BLAST results are available for this feature:
BLAST of TCONS_00060642 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KAP00.000e+070.24cAMP-dependent protein kinase type I-alpha regulat... [more]
back to top