TCONS_00061043 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061043
Unique NameTCONS_00061043
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1798

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061043 ID=TCONS_00061043|Name=TCONS_00061043|organism=Clytia hemisphaerica|type=transcript|length=1798bp
AATAACGCTAAGAAAGTTCAAATCTTAATTCAAACAGTTTtatgtttgtt
tatatttgatgttcgagaaaaaaatcttaacCAAACTAGAGGAGaggaat
atttttaactttagaTTTCAACGGGCAGATGATTGGCAGATTTGTCAGTG
GTTGTAATAAGAATATAATAAGAATATCAATatcaattttttctcaaatt
cagaGAATATTAACTTTGACTTTAAGATTTTAGACATGTCAAAATACTAC
CTTTAGAACGTCATGGTTTGCataaattttcaattctttttttaactCGT
TAGTTAAAGAACTCACTGATGGACTACTTTAACGACATACATTTTCGCGC
AGATTTCGAGAATTAAGTCCCAATGTAAATTTTGAAAGATCTTATCTGCG
AAATTCTATTCAACAAAATCGATAATACAATcagcgaaattaagtcccca
cgaaatttaatctccACAGAAATTTATACCATTAAAGTAAAAGTTGTAAT
TTCAATACTTCTTTTAATatacaaattaaaaatattacctatttgaaaaa
aattagggTCGTTCGCACTATAAGAACAATAAGCCAATTTTAGTATTTTC
AGTTTCCACCATTTACACTGTGTCCTCTTCCTCTTCATTCTCAGCTTCAT
AACCTTGATTCAAAGCATCATATCTTAATTGTCGTCCACCTCTTCTATAG
CTAGATTGGCTGTATTGATTGCCGCGTCTCTTAGAATATATAGGCTTCCT
AGCTATATGTCTTCCACCGAGAGCAGAAGAGGAGGATAGACTTGCATTTG
TCGGAAGTTGGGATACGTGATGGTGGTGCACTCTGTGAATATCTTTGCTG
GCTCGAGAAAAATTTCAACACGAATATCAATGAAGCTGAGGCAGCGGAAA
AGCTAGATAAGCTTCGTAGCGAACAAGATAAATTTGTCAGCTTGAGTTTC
GAAACTATATCGTCAATCGGACCAAATTGTGCAGTTATCCATTACAAACC
AGAAATGGAGACAGCGAAAGTACTCTCAACTGATATGTATCTTTGTGATT
CTGGTGGCCAATATTTGGATGGCACAACAGACGTTACAAGGACCATACAC
TTAGGTACTCCAACAGACCACCAAAAGGAAACGTATACGCGTGTTTTGAA
AGGCCACATCCAGCTAGCCCGTGCTGTATTTCCTAAAGGAACAAGAGGGC
ACATATTAGATGTTCTAGCCCGTGCACCATTATGGGAGATTGGACTCGAG
TATGCGCATGGGACTGGGCATGGAGTTGGTGCTTTCTTAAATGTTCACGA
AGGACCCATCGGAATCAGTCCGAAGAACAGCGAGGATCCACCCTTAGAAT
CTGGCATGTTTTTATCTGACGAACCTGGTTATTATGAGGACGGTTCTTTC
GGAATCCGAATTGAAAATATTATACAAGTTgtagagaaaaaattaaaaCA
TAATTATGGTAATAGAGGTTACTTAGGATTCGAAGTTGTCACAATGgcaC
CCCTTTACAAAGAATTGATTGTTCCCCAACTTTTATCAACAGAAGAGGTT
GATTGGATAAATGACTATCACACTGAAGTATTTGAGAAAGTGGGAAGTTA
TTTGAGAGACAATAATAAAGCAAATGTTGTTGATTGGCTCAAAAATGCCA
CATCACCTTTGGGCTAAAAGTATTGAAAATCTACTTTTAGTGAATTTTAA
CGgtttttttgtgcaattttttaatttttacgtttattaaattttaatgT
CAACTTTAAGATAAGTTTTTAGTCATAGAAATTAGCAAAATATATAAT
Run BLAST on NCBI

transcript from alignment at scaffold_354:279343..289034+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061043 ID=TCONS_00061043|Name=TCONS_00061043|organism=Clytia hemisphaerica|type=transcript|length=9692bp|location=Sequence derived from alignment at scaffold_354:279343..289034+ (Clytia hemisphaerica)
AATAACGCTAAGAAAGTTCAAATCTTAATTCAAACAGTTTtatgtttgtt tatatttgatgttcgagaaaaaaatcttaacCAAACTAGAGGAGaggaat atttttaactttagaTTTCAACGGGCAGATGATTGGCAGATTTGTCAGTG GTTGTAATAAGAATATAATAAGAATATCAATatcaattttttctcaaatt cagaGAATATTAACTTTGACTTTAAGATTTTAGACATGTCAAAATACTAC CTTTAGAACGTCATGGTTTGCataaattttcaattctttttttaactCGT TAGTTAAAGAACTCACTGATGGACTACTTTAACGACATACATTTTCGCGC AGATTTCGAGAATTAAGTCCCAATGTAAATTTTGAAAGATCTTATCTGCG AAATTCTATTCAACAAAATCGATAATACAATcagcgaaattaagtcccca cgaaatttaatctccACAGAAATTTATACCATTAAAGTAAAAGTTGTAAT TTCAATACTTCTTTTAATatacaaattaaaaatattacctatttgaaaaa aattagggTCGTTCGCACTATAAGAACAATAAGCCAATTTTAGTATTTTC AGTTTCCACCATTTACACTGTGTCCTCTTCCTCTTCATTCTCAGCTTCAT AACCTTGATTCAAAGCATCATATCTTAATTGTCGTCCACCTCTTCTATAG CTAGATTGGCTGTATTGATTGCCGCGTCTCTTAGAATATATAGGCTTCCT AGCTATATGTCTTCCACCGAGAGCAGAAGAGGAGGATAGACTTGCATTTG TCGGAAGTTGGGGTAGGAATCTTCTGTTAGGTAGAATTCCTTCTGTGCTT GAATGTCTGCATAACAGTCGTTTGACAGACTATTGAAAGTTGGTCTGTTG GCAGCACCATGATTTACAGACTTTGTTGTCAGCTTTCGACGTCCGATACA CATATTCATTTTCATCGGTCGGAACCGGACAGacataaaacataagaaaa aataactcaaaaatctacaggaaggaaaaataactcgagaatgtaaaaga aaaaaaaacgagttaaaacacgaaataactcgaaactttaaaggaacgaa aaaataactcgagaatctacaggaagcaaaataactcgaaaatttaaaag aaggaATAAAAAACCGATTTGAAATTAAGAAGTAACCCCAGacatttgaa ggaaaaaaaataactcggaaatttaatggaacgaaaaaataactcgagaa tctacaggaagcaaaataactcgaaaatttaaaaggaTAAAATACGCGAG TTATAACTCGGGATTTCCGAGCCTCCTTATTTAAGAGTTTCTTAGCTGAA AGAATTTTTAGcgtaaaaaacttaatttttgcgagggattatatttcgcg aaaaaggcgaaattcgcgaaaattcgcgaaatataatcccggCGAAAATT TATCCCCTTAAGGTATGTTATCTTTGTTCATAATTTCCAGATACGTGATG GTGGTGCACTCTGTGAATATCTTTGCTGGCTCGAGAAAAATGTAAGCTTG ACTAATTATAGAGGTCCCCATTACACTAATAATGTTTCAAGACAAATGTA AGTCTTGctaattgaaaaacatttttttcgtgCAATATTCTTAGAAAaga ctacacgtttttctttttataaggaacacgtttataaggaactcgaggct gaaaatggtccaaaaaataaggaatttttaaggaactgctcaggctgaga ataagaaaacaagttttaaggaacagtaagagatggttatccaaacttag cagctatgtaaataaggaactcgataaggaactttgaggctgaaattctc tgtaaaaataaggaactcagaggctcagagcaaagttttaaggttcctta taaaaaaaacaacgtgtatagTAAATGCATAACTCACCAATTCAATCTGG CCCAGCCTTTGCGAGAAGTTACAATAATctcaaataataataatgacaGT TTGTTATTTTGTTGCCAAATTCTTCTTATTGACGCCTATagtaatttctt taattttgttaTTTCCTTCAGTTCAACACGAATATCAATGAAGCTGAGGC AGCGGAAAAGCTAGATAAGCTTCGTAGGTATGGACTCCAAACCATCATTA GCGAGTTATGTGTTTTCTTTAGCGGAGACGGATGTTTTTCTATAGCAACA AAatacataagaacataatgcttcAATTGTTAAAAtatagaacaagttaa gaacattttcaggctttatgaaattgttcaaaaataCTCAAGGAATtgta aaattaagaacattttaagaatattaaaaacaagaaggcgaagtttttat ttgacaaagGACGACAACACTCCTACAGTTCTCGATTATGCAATTTCgtt ttttatccaaaaatgaaaatatatataactATTATTTTTCTACCTGACAA TTTATGCAGCGAACAAGATAAATTTGTCAGCTTGAGTTTCGAAACTATAT CGTCAATCGGACCAAATTGTGCAGTTATCCATTACAAGTAAGCAATAATT TTATAACAAGATATGGTTCGGTATACACCTATTGAGACAGAAGTTCAAAT CCAATTCTCTAACTGAACATCCCAATAAAGTAGAGAGGTAATTTTCAAGA ACTGTTACCTTTGTCGTCAATAACCCCTCCCCTCTTCTCTCCGGTAAAAA AAGAGCATCCTCCTAAAAGATTTTGAGCAGAGTGATATATCCAttagttt tttggtttttacatggctattatttttatttcaaatatacAAGGCGCATA GTTCACAAATCAtccaaaattttaatatttatttcttGCTCAATGAATAA AACTACAATTTGCTGTTTTTAGACCAGAAATGGAGACAGCGAAAGTACTC TCAACTGATATGTATCTTTGTGATTCTGGTGGCCAATATTTGTAAGTAAT TAGGTTTCAGGGTAGAGGTTGGTACTAAACCAAAACTACCTCGAACCAAA GTGAATGCTGTTCAAAACTCGAGCGAAGTATGTGAACaattcaaaaaata gttttctaATCTCTTAAGTCAGTTTATTACAAGTATTTTGCTTGcttttt gtttgtaattcttGAAGAAAATCGAAAAGTCTTGTTTCAGTCAAATaggg ccctgagacgtctcagatgctGTTTTCAAAGTGTAGATCAGGAAGTCTCG GACGAATAGTGCCGAATCCGTGCTACACTCGTTTCATCTCAGACACATAC CATCATAATATGATAATCTTTGAAGAGTGTTAAAATTACGTATATATGTT GTTTTTACCAGGGATGGCACAACAGACGTTACAAGGACCATACACTTAGG TACTCCAACAGACCACCAAAAGgttctctttctttcttttcgcAAACATT TAAAATTTGTCTAAAATATATTATTGATGGAACTTGAATGATTATGTGAA GTCGAGATCCTAACCGAtccaaattttatttaatttgatagAATTTCAGT TGCCATGCCCCACCCCTCGTTAACATCTTCTGAAAAACCGAAAGGGGTTC GATCATTACAATTGGTCACTGAGGTTTGGGTCGGACTGTTTTTACCGCAC TCGATtacttgaattttcaaaaagtgacaaGATTATGACTGGGAACCAGA TTAAATAAAGAGCGTCATAATTTAATGTTTTAGGAAACGTATACGCGTGT TTTGAAAGGCCACATCCAGCTAGCCCGTGCTGTATTTCCTAAAGGAACAA GAGGGCACATATTAGATGTTCTAGCCCGTGCACCATTATGGGAGATTGGA CTCGAGTATGCGCATGGGACTGGGCATGGAGTTGGTGCTTTCTTAAATGT TCACGAAGGTAACCCTATGAGAGAACTATTTTATCATCTACAGTAAGTCT GTTCCAACAAAGacTGTCTGTAAATTTTGATACATTGCTCTTGGTGTTCA GATTGATATCTTTCTTAGATTGAAAGTTACGATCATTGAAAATGAATCTA TTtgccaattttcgccattttttacCTACTTTGGAGGGATGTATCTTTTT ACCTATTGCATTAGAATgatagaaatttgttctttaaAAATCTGTGTATT GCCATTTACAGGACCCATCGGAATCAGTCCGAAGAACAGCGAGGATCCAC CCTTAGAATCTGGCATGTTTTTATCTGACGAACCTGGTTATTATGAGGAC GGTTCTTTCGGAATCCGAATTGAAAATATTATACAAGTTgtagagaaaaa attaaaagtaagTCTTACAATCCTTGTACATCAAAGAGAGCTGCTTTTGT Ttatagtttttggacctaccccggtggggtggaggtcctataaattcacc tctgtccgtccgtccgtccgttcgttaccagcttttctcgagattgaatc ataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaac ggctaaaaaacgggttttttggactttgtgaaaaattggatcattaattt tttctgattttttacatgaaagtagggtaccatcataggtaaaagatcgc tcaagcagatttttgcaaaaaaatttatttggcttaaaaaacgcatgttt atctataagaatcactattaataagcatacaccaatgttcttagtcaaat tactcaatttttttaatgagatatatgttttttttttgctcatgagggct tacttttaaagaatatgtgtgttagCCATGAAATTTTCGTTGCTTTGCgt gttttttagaaaaactggccaaattcgatatttttttataagcacattat caattacttaggtacgttagcttttctcgagattggctctttcattcttc atgactttttgcacaaagatgcataaccaTAAACtgtcgaatgtgacgga gcccaatttttgaaaaaaaaaatgttttagggcaaatttgggccaaaaac ggctaaacaacgggttttttggactttgtagaaaattggatcattgattt tttctgattttttgcatgaaagtaggttaccatcataggtaaaagatggc ttagggagatttttgcaaaaaagatttgttggctcaaaaaacgcatgtcg ccgtgtcaattcaagacagccttaagtccattttttccattttgagataa ttgactttaaaggttgAGATGTGTTGGGNggaggtcctataaattcacct ctgtccgtccgtccgtccgttcgttaccagcttttctcgagattgaatca taggaatcatctGATTTTTGgaacaaaggtgcaaaatggtagtggccaaa atgtgacggagcccgattttcgaaaaaatatttttttgggccaatttggg ctaaaaaacggctaaaaaacgggttttttggactttgtgaaaaattggat cattaattttttctgattttttacatgaaagtagggtacNNNNNNNNNNG aaatttgcactaaaatttaggacttaaggctgtttatggttgatatatta tggaacattctaaattcttattttttttgaattgcaaaatacacctattt cccattagaattctgtggacttaaggccgtttttggaaagcgtgcatgct gaaatagggggttatggtctttagtcaattttcgaaaaaatggacttaag tctgtcttgaattgacacggcgatgtttatctataagaatcactattaat aagcatacattaatattcttagtcaaattactcaatttttttatgagaca gatgttttttttctcatgagggcttacttttgaagcaattgtgtgtttag acatgaaattttcgttacttggcgtgtttttatagaaaaactggccaaat tcgatatttttttataagcacattatcaattacttaggtattagcttttc tcgagattggctctttcattctttatgattttttgcacaaagatgcataa ctataaaccttcgaatgtgacggagcctgattttcgaaaaaaaatgtttt tgggcaaaaatggattttttggactttgtgaaatattggatcgttgattt tttgcatgaaagtagctAAAAGATgtgtcaagcagatttttgtaaaaaaa aacttttcagctcaaaaaacgcatctttatctataagaatcaccattaat aagcatacatcaatgttcttagccaaattactcaattttttgatgagata gatgttttttgtcttgaatatgaaagaatatttcaagagcatgaaatttt ggtttctaaacgtttttttttataagaaacaaacgactaattttaataag tcgtcactatttgtgttctgaatgattgtttaacgttcatatgctcacgt agatatcaattatatatgtgttaaatgcccaactaggtaggtccataaaa gtatcacttgtcttCTATTATTATCACTGACTGTTCAGCCAAGGTATCTT CTAGtggaattagtatatgtaatcacatgataacgagtgcaattcgaata taattgcacgagtgatttttttgttattaattttccgagtccgaaaggac gaggaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN gtgcaattttcgaattgtacgagttattatgtgattacgagctaatcgca caatggcttccACTACTTTTtaccagttaggaaagtaaattagtactagt aatcgtcagtaaacattcgaaaacctccttttttcttttgtttaaaaaga aaacattgcagtgtaatttttctttgttttcaattaaaagaagctactgt aacgtaaaatttctttgttcttttttatattgaagaaaaaaaatgtcttt gttttttattatatattaaaaaaaagtctccgtctgacacaggacttggg agagaaaagaataaggggacaaaagtgtccccccgccgaagagtgcaaaa agtggtaatagtgcaattaacgattaattgcactcctctaaaccaatcag attcgagtaattttgcacggctgacgattacagaaattacactgagagtt ttatattttctcttctctctgtgtctttcttttattgttgtttattgatt tcctttctcacaaaatgaatttcgaatgcaattaaaacgttcgatgcaaa aaaatgtaaaaaaaaacattaaaatcatttttgtaaacattggcgcagca ttgaagagtgtgattaacgattaattgctctctacagaatgcaattaacg attaattgctctctttgagggcgtgccaaataagaaaaaataacccatcg tgcgattaaccGTTAAAGCATTCACCATACTATAACTGGCTAAAAGGTAA AGAGTTTTTGTACCAATAGCTAACACTTTTTAGTAGGAGCGAATCGTCTC TCatcagtacacgtttttttttttattagaacacctaaaatttggctgag cctggatgtgcttatttttttagcaattttcagcctaaaatgttcttaaa tgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNgaggctgggcatgttcttaagatgttcttaatttttcgacgaatttca gcctatatgttcttataaactaggttctaataaaaaaaaaaacgtgtatt attgGGAGACTTCTGTGTTTAACTAGCAGCGGGCTAATAACGATTTATTA TCCACGATAACGATGTATTTTCTTGTTCATTTCAGCATAATTATGGTAAT AGAGGTTACTTAGGATTCGAAGTTGTCACAATGGTAAGGTTCATTTCATT TCTACTATACCAacataattgtttttattaacGAATGCCACCCAGCTTTA GTATGTTTCTATGGTTCGCTCGGACGTGAGTAACCTCTGGAGGAACTATA AGTCAAATAGTGCGACACTTTAATAGTTTAATCCTGGCAAGAGCTGAGAA AATTACATTTAAAGGTGCGGAGACTATATGAACAATATTTGcagaagaac attttaaaacgaagtatttttttttctttttaggcaCCCCTTTACAAAGA ATTGATTGTTCCCCAACTTTTATCAACAGAAGAGGTAActaaaagatatt tctttatttttttaaccaTAGCTTTGTACACAAATTACCTGGGTAAGAGA GTaccccttttttataagaacaataaggctcatacttgccaaaaaataag aattttgaaaaaataaaaaataataaaggttgggtataaatcctgaaaaa tctcaatttcaCCTCATTAATAAGAACATTATAAAGGTCAGCCACTGCCC AAAAGACCTTTGTTAAAGTTCCAAACATATAGAAATAGGTGAAACTTAGA AATCGACTCCATTAAAGAAAATATCTTCTGTATTTTCCAATTGGTGAAAA TCTGTGATTTCACCCACGTATGCTCTCTGAGCATTTCGCACACAATTCTT CTTAGAAATATCTGTTTTTTATACATATCTAGCAAATTCTACAACAATTA CAAAACAAATTAAAACCCCCAACGGAATAAATAACAAAACAACAGATAGT TACAAAACATTGAAGCGATAAAAGACCATAAACTATGTACGATAAATGAA TTAATTAGATAAAAGTATTCTCTTGATATTTACAAATAAACTGACGGACA GCGGCAGTAACAAACATGATCAGAGCAATTTAAGGcttaaagtgccaaaa aaataagaacagtcgagcCCTGTCAAaagtttactggttcttataaaaaa tgatttAGGGTTTTAGTTCTTGTTTCAGCAGAAGGTAGTTTTTTGGATGG AAAACGTTTTCAGTTTACATTTTGGAATTAGCCATTATTTTGATAGAaag cttcttataaaaaaactttccaTTCCATCATCTCATTTTAGGTTGATTGG ATAAATGACTATCACACTGAAGTATTTGAGAAAGTGGGAAGTTATTTGAG AGACAATAATAAAGCAAATGTTGTTGATTGGCTCAAAAATGCCACATCAC CTTTGGGCTAAAAGTATTGAAAATCTACTTTTAGTGAATTTTAACGgttt ttttgtgcaattttttaatttttacgtttattaaattttaatgTCAACTT TAAGATAAGTTTTTAGTCATAGAAATTAGCAAAATATATAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038322XLOC_038322Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061043-exon-scaffold_354-1491911889:279343..280154TCONS_00061043-exon-scaffold_354-1491911889:279343..280154Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:279343..280154TCONS_00061043-exon-scaffold_354-1510915933:279343..280154Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:279343..280154TCONS_00061043-exon-scaffold_354-1575043694:279343..280154Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:280833..280883TCONS_00061043-exon-scaffold_354-1491911889:280833..280883Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:280833..280883TCONS_00061043-exon-scaffold_354-1510915933:280833..280883Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:280833..280883TCONS_00061043-exon-scaffold_354-1575043694:280833..280883Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:281414..281469TCONS_00061043-exon-scaffold_354-1491911889:281414..281469Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:281414..281469TCONS_00061043-exon-scaffold_354-1510915933:281414..281469Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:281414..281469TCONS_00061043-exon-scaffold_354-1575043694:281414..281469Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:281802..281879TCONS_00061043-exon-scaffold_354-1491911889:281802..281879Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:281802..281879TCONS_00061043-exon-scaffold_354-1510915933:281802..281879Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:281802..281879TCONS_00061043-exon-scaffold_354-1575043694:281802..281879Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:282215..282283TCONS_00061043-exon-scaffold_354-1491911889:282215..282283Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:282215..282283TCONS_00061043-exon-scaffold_354-1510915933:282215..282283Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:282215..282283TCONS_00061043-exon-scaffold_354-1575043694:282215..282283Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:282654..282714TCONS_00061043-exon-scaffold_354-1491911889:282654..282714Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:282654..282714TCONS_00061043-exon-scaffold_354-1510915933:282654..282714Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:282654..282714TCONS_00061043-exon-scaffold_354-1575043694:282654..282714Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:283026..283200TCONS_00061043-exon-scaffold_354-1491911889:283026..283200Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:283026..283200TCONS_00061043-exon-scaffold_354-1510915933:283026..283200Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:283026..283200TCONS_00061043-exon-scaffold_354-1575043694:283026..283200Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:283454..283599TCONS_00061043-exon-scaffold_354-1491911889:283454..283599Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:283454..283599TCONS_00061043-exon-scaffold_354-1510915933:283454..283599Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:283454..283599TCONS_00061043-exon-scaffold_354-1575043694:283454..283599Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:287628..287675TCONS_00061043-exon-scaffold_354-1491911889:287628..287675Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:287628..287675TCONS_00061043-exon-scaffold_354-1510915933:287628..287675Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:287628..287675TCONS_00061043-exon-scaffold_354-1575043694:287628..287675Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:287926..287976TCONS_00061043-exon-scaffold_354-1491911889:287926..287976Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:287926..287976TCONS_00061043-exon-scaffold_354-1510915933:287926..287976Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:287926..287976TCONS_00061043-exon-scaffold_354-1575043694:287926..287976Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1491911889:288784..289034TCONS_00061043-exon-scaffold_354-1491911889:288784..289034Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1510915933:288784..289034TCONS_00061043-exon-scaffold_354-1510915933:288784..289034Clytia hemisphaericaexon
TCONS_00061043-exon-scaffold_354-1575043694:288784..289034TCONS_00061043-exon-scaffold_354-1575043694:288784..289034Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:279343..289034 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.00514214 0 0.108485 0.0149286 0 0 0.0698613 0 0 0 0 0 0.0273267 0 0.56139 0.505689
Blast
BLAST of TCONS_00061043 vs. Swiss-Prot (Human)
Match: XPP1 (Xaa-Pro aminopeptidase 1 OS=Homo sapiens GN=XPNPEP1 PE=1 SV=3)

HSP 1 Score: 320.087 bits (819), Expect = 6.621e-100
Identity = 154/286 (53.85%), Postives = 199/286 (69.58%), Query Frame = 3
Query:  813 IRDGGALCEYLCWLEKNF-NTNINEAEAAEKLDKLRSEQDKFVSLSFETISSIGPNCAVIHYKPEMETAKVLSTD-MYLCDSGGQYLDGTTDVTRTIHLGTPTDHQKETYTRVLKGHIQLARAVFPKGTRGHILDVLARAPLWEIGLEYAHGTGHGVGAFLNVHEGPIGISPKNSEDPPLESGMFLSDEPGYYEDGSFGIRIENIIQVVEKKLKHNYGNRGYLGFEVVTMAPLYKELIVPQLLSTEEVDWINDYHTEVFEKVGSYLRDNNKANVVDWLKNATSPLG 1664
            I+D  ALCE   WLEK      + E  AA+K ++ R +Q  FV LSF TISS GPN A+IHY P  ET + LS D +YL DSG QY DGTTDVTRT+H GTPT ++KE +T VLKGHI ++ AVFP GT+GH+LD  AR+ LW+ GL+Y HGTGHGVG+FLNVHEGP GIS K   D PLE+GM ++DEPGYYEDG+FGIRIEN++ VV  K K+N+ NRG L FE +T+ P+  ++I    L+ +E DW+N+YH    + +G  L+   +   ++WL   T P+ 
Sbjct:  335 IKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 620          
The following BLAST results are available for this feature:
BLAST of TCONS_00061043 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XPP16.621e-10053.85Xaa-Pro aminopeptidase 1 OS=Homo sapiens GN=XPNPEP... [more]
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