TCONS_00061472 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061472
Unique NameTCONS_00061472
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1182

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061472 ID=TCONS_00061472|Name=TCONS_00061472|organism=Clytia hemisphaerica|type=transcript|length=1182bp
TACCATGGTGATGACCAGATCTGTCTGGTGATCGATGAACCGTTTAAAGA
TGTTGGTGATTCTCATTTGATTGATGCTCGTGGATGGAGATATTTCAAGA
AAGAAATCGTCAGAAAGAAACAATCAAACCAAGTGCAAACAAACTTTTCG
ATTTCCGAAGaatttcAACCTAAAAGGAACAACTTGGTCAATACCATACC
CCTTCAGACGAACCAATGGGCTCTCTCATTCAAATTCATTATATATGACA
AGCCTCCTGCAAGCGACCAACAAAGTGGAATTTTAACATTTGCCACAACC
AATGCGGACGGACTGATTcttcaaaagttatttgaaaTTCGTGATAGTAA
AAATTCTATGAGGATTTTTATTGTACAGCACAACTCAGATATTAAGGCTT
TATTTCCAATCGATTACGAGTTTAACAAATGGTATCACCTTTCATTGGAA
CAAATCTACATTGCCAATGACAATCACTACGTTTTGTCAGTCATGTTTAA
TCATCGTCAAATACTCCCAAAAAAtggaattttcattaaaaaccctaaaa
aatTTAACAATGTGAAATGTTTTGCTGGGCCACAAGATTTGCTAGCATTG
AATGGACGAGTGAGTGGTTTGGAATACAAACAGACTGCTTCAGATAAAAg
cttcaaaacaaaatattcgTTTCTGGTTGACATCATTCCAACATGGCCTG
GAACAAATTGGGAGATAAGCTTCAAAATCAGAGTGCATTCAATGAAAAGG
GGTTCTTTTGAACATCCAATAAATGATTACCAAAATGTTTTTCAACTTGG
GATCGGTGAAAATCATGGAAAGGATGGTACACGGATCGCATCTCTTTTCA
TTCAAAAGCCATCCCGGAGATTTGTCTTCTATGTAGATCGGTTAGTGAAA
GCATGGTATGGGATTTCATCCGCGTCATCTTCTTACATCCAAGCTTTCGA
ATTTGACCAAGAATACAATATCAAAGTCAATAAGTTTGGTGTTCACGTGC
AAATTTTTATTGACAGTGATCGCCCGAAAGCTAACTTTCAATTTTATGCT
AACAGAGATTCCAACAATGTTCAATTACATTTCAGTAACCCTTGGTATGA
TAACGCAGATGCGACAATAACAAACTTGAAATATAATTATTGAATTGAAC
ACAACAGATTGGTATTACTCATTGATTTTAAA
Run BLAST on NCBI

protein sequence of TCONS_00061472-protein

>TCONS_00061472-protein ID=TCONS_00061472-protein|Name=TCONS_00061472-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
YHGDDQICLVIDEPFKDVGDSHLIDARGWRYFKKEIVRKKQSNQVQTNFS
ISEEFQPKRNNLVNTIPLQTNQWALSFKFIIYDKPPASDQQSGILTFATT
NADGLILQKLFEIRDSKNSMRIFIVQHNSDIKALFPIDYEFNKWYHLSLE
QIYIANDNHYVLSVMFNHRQILPKNGIFIKNPKKFNNVKCFAGPQDLLAL
NGRVSGLEYKQTASDKSFKTKYSFLVDIIPTWPGTNWEISFKIRVHSMKR
GSFEHPINDYQNVFQLGIGENHGKDGTRIASLFIQKPSRRFVFYVDRLVK
AWYGISSASSSYIQAFEFDQEYNIKVNKFGVHVQIFIDSDRPKANFQFYA
NRDSNNVQLHFSNPWYDNADATITNLKYNY
Run BLAST on NCBI

transcript from alignment at scaffold_358:856363..862267-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061472 ID=TCONS_00061472|Name=TCONS_00061472|organism=Clytia hemisphaerica|type=transcript|length=5905bp|location=Sequence derived from alignment at scaffold_358:856363..862267- (Clytia hemisphaerica)
TACCATGGTGATGACCAGATCTGTCTGGTGATCGATGAACCGTTTAAAGA
TGTTGGTGATTCTCATTTGATTGATGCTCGTGGATGGAGATATTTCAAGA
AAGAAATCGTCAGAAAGGTAAATACGGGGGAAATCCTACTTGTTCGACAG
TATACTTGTTCGAAGGTACATTTGTTCGACAAATTTATGAATTTGTCGAA
CAAGTGAGTTGTCGAACAACTGGGTTGTCGAACATGTGACATATGTCAAA
CTCGAACCCAGTTCCTTGTCGGTTTTTTAAGATTCTAATAGCACTCGCGA
CGAAAAGAAAGACTACTTAGTTAGTGAGGGATGTACTCAGACATATTGCC
CGAGGTCAAGTAACGATCGCGACAAAAAAAAACCGGTTTAAACAGTTTTA
TTAGAACTTCTTAATTTGGGTTTAGCCTGGCCCTCAAATAGAACAAATCT
TCTCAGATTTAAATTTAAAGGAGGTAAAGGAATTACTGTGATTACGAAAT
TTTGAGCAAATTTGGTTAATCTTTTCCATTCTCAAAATTTGGTCATGCTT
TTACGATGCTCCTCATTTTTTCCCAAATTTCAAATTTTCAAGGTTCCATT
ATCTTAAAGCTTTGTGAAATTCTTTGATTTACTATTCATTTCAATGGCTT
CCAAGGGACAGTGCTATCAAATAAATAATCGAAATGCTTAAAAGTTAGAG
CCTATTAGCTGAGGGACTCCTGGTTAATATCAGTCATTTCCTTAAATCCT
CTAAGTTGTATTAGTCCCTAAAGTACAGTGTGTTCCGCAAAAAAGTATAC
TCAAAAAGTAAAATCGAATTATGAAAAAACTTTAAGCTTAGGCGAAACAA
AAAAAAATTCTTGTTTCCGGAAACCAGCCGGGTGAAAAAAAATTTTTTTC
TGACCCGGCCGCAAACTTCGTTCGTTAGTAGTCCGTACTTGTTGTAATTT
AGGGCATAATTTATGCTGTGTTTATACATAAAAGTTATTCTTAAACTCTA
TTTCAATGAGCCATAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTTA
TTTTTAAATGAGCTCAAGGCACATATATTCAGCGTTCTACGGTGAAAATT
TCATTGTGAAAAAAGTCTTAGTTTTAGAGATATGAAGCTTCAAGCACACT
AAGTCGGAGATTAAATAAGTCGAGATGGAAAATTTTCAAAGCAAAAAAGC
TAATTTACTTTTGATTGACAGCTCTCTTTTACGTCATTTTGATGAAATAT
GCCATTTTAATGGTCAAACCTATGCACCTTCCAAGTCAAATTTCTCGTCA
ATGAAAAGCTGGTTGAATATAAATCTTTCAGCAATGGAAAGAAGAATAAT
TTTTCTTTCTGCTGTATACAAAATTAACTTTCTTGGACATTTCTACCTTT
TCCAAATTAAGGTTAGTTATGAGTTAGCTTCTTTTTTTTAAATATCTTAC
TTCATCTTCAATGTTGAATAGTTGCACCCTTGTGTACTTAAGACTCGATA
TATCTTGAACTAAAAAACTTTCTGAATTAGATTTTTAAGCACATGGAGCT
GAGTAGCTATACTGAAAATTAAAGTTATTGGTTTAGTCATTTTTTTCACA
GAATTATCTTACTTTTTCAGTATACTTTTTTGCGGAACACACTGTATTTG
TTTTTTACTCATTCACAGAAACAATCAAACCAAGTGCAAACAAACTTTTC
GATTTCCGAAGGTAAGTTTTGCCTGAAATTTTGAATTTCCGCCGAATTTG
ATTTATTCTATAGATTTTCAAGTTTGTTCTAATTCAGTTTTTTTTGCCTA
TTTAATAAACGATTTTTGGCCAAAAATATCTTGCGAACGCCAAAATAAAT
TCCTTCTTAAAACTTTTTCGGTCATCCGCTAAATTAAATTCCCGCCAAAT
TTTCTTTCTTTAAAGTATTAAGTCTGTAAATTACAAACTTTTCCAGTTTT
TATTAAAAAATTTGAAAAATCCTTTGGAAAAAGAAGAAAAGGTGTCCGAA
ATAAGGCGAAACAGCGAAATGCGATTTTTTTTGGATTTTTTTTTTTTTCG
ACCACGAAAATAAGATCCTTAAATTATGTTACCTTAAAGTAATTTTATAT
AAATGTTTTTTTTATAAGCAAGTGTCTGCCCCTATATCAGGCTCGCATTA
TGCTTAGTATTCTATTGTTTTTAAACAATAGAGCCATTGTTTAGGTACCA
AAAACTGAGCCTGCATATGTTTATAAACGTTTTGCTTATAGAATAAAAAA
CATGTATCTCCAAATTGAAAAATAATTTAATTTTTCATAGAATTTCAACC
TAAAAGGAACAACTTGGTCAATACCATACCCCTTCAGACGAACCAATGGG
CTCTCTCATTCAAATTCATTATATATGACAAGCCTCCTGCAAGCGACCAA
CAAAGTGGAATTTTAACATTTGCCACAACCAATGCGGACGGACTGATTCT
TCAAAAGTTATTTGAAATTCGTGATAGTAAAAATTCTATGAGGATTTTTA
TTGTACAGCACAACTCAGATATTAAGGTATAACATTTGTTTTCTTTTTTT
GCCACGGAAGGTTGTCTCAATCTTTAGTGAGTTAAACCATACAGTGTGTC
CCATTGAGTTTCACGCCCGAAGGGCTAGACGCGAGACTCCTGGATGGGAG
ATGAAACCACTTATTTCCCATCCAGAACACATGCGCGTAGTTTTTACACA
AACGCCGGATTGAAACTAAAATATATCGCTGGATTTTAAAAAATGTAGTC
CTTTAAAACAAAGAAACCGCTTGATAAAATCCGTCGTCATGATTACGGAC
CATTTTTTATATAGAGATAAATCCTCATAATTTATTCCAAATTTTACACT
TAATTTGACTTGTACACTTAATATTGCAATCTCTAAAAAAATTTCAATCA
TTTTTTTCAAATATTTATTGATTGAACAGAGAATTGTAATCTTGTTTCAG
TTATTCTAAGCCCAATTTCGATAATGCGTTTTGAGGATTATACCTTTTAT
AAAAATTTGGCTGTTTTTTTTTTTTTTGGGACACACTGGTGCTCTGATGC
CATGTCCTGGCAAATAATATCAAAGCTCTTGGCATTTATTAGTGTTTTGT
GACATCGAATCAGGAAAAGAATTCACTATCAAGAAATTGCGTTGATAATA
AATCGTCACAACATTACTTCGAAAACGATGCACGATTTGACGCATTTATA
AAAATGGCCGAATTTTTTTTTCAGCTGAAAATGCTGGAAATATGCCGGAA
ATCGCCGTTTTTCTGAATTTTCATTGGACTCTTTCTTTACAATTGGTTGT
TTTTTCATTCAAAAACATTATTAATAGCAATGACCCCCATCAAGCATGTT
TAGATTTTCAATAAAATTGATTTTGGAAGCCGGAACTATTTAAAAATCAC
CGGAACAACTTATTTTCGCCGGAAAGATAGTATTTCTTGAATTTCTCGAG
CTGTACTTTATATTTTGTTATGAAATTTTGCACACTGAGGCAAAATGACA
ATACCTAAAATGTAAAATGTATTTTTTTCCGGCCGAAAATACCGGAAATA
TGCCGGAAAAACCGTTTTTTTGAGATTTTCTCGAATTTTAATCCCTAGTT
TTTTCTGATTTTTGCAGAAAGATGCGTATTCGCAATGCTCAAAACATGAC
CGAGTTCGATTTAAAAGAAATTTTTTTTCCAGCCAAAAATGCCGCATTGG
ATTTTTTCGTTTTATGCCTTTGTTTTTTTTTTCAAACAAAAACATAATTT
ATAATGTCCACGATTAAGCATGGTTCAATTTTCAATGAAACTGATTTTGG
TACAGGAACTTTCTAAAAATCGCCAGACCAGCCGAGAATCGCCGGATTTC
TTGAATTTCTCGAGTTGTTCTTGTATTATTCTGCATTTTTATACTATTGT
TGTCATTTTTCAATTGTCTTATCTTCAGGTAGGTCCATTCAGCATGTAGC
TTGTTATTTTTATTCCCATAACGAGGTCCTAATAGGGATGAAATTTTTTT
TACCGATTTCAAAAAAAACGCAATGGAGATGGTTATCGAGTGTAATTTTT
ACAATTGAATTTCAAATGGGGATGAAATATAAACCAATAGTAGAAATTGC
AGGGTATTTTTTCCCTGAGGGTACTTCATTTCCAAAGGACGGTATTTGCC
GCCAGTGCATTTACCGAACACTTCTGACCCTTACAATGCAGTTTGTTTTC
AAATCTTATTTTTCTGAAGCCACCTGAAAATGAGCCTGAGATATCGACAC
AATGTGCAAAACAAATCAAAATAGGTGTGAGTCAAAACTACAAACATACA
TCAGATTGCAGTCTTTAAACACGCCTTACAGTGTATCCAGCTAAAAGACC
CTTGAAGTACACCCTCAAAGTGCATTTCGGGGGTCTCGAAAATCCTACCC
TTAAAAGCGGCACATGCTGTGGGCTGGACCATATGAGTGCCCCCCCCTCC
CACAGATTTCTTCCACTGGGGATGCGAAATTTTCGCCAGATTTTCGACTT
TGGCGGGGATCACATGTTTCTATATTTCCTATGAAATATTTTATTTCCAT
ATTATTTCGTTTTCATTAAAGGCTTTATTTCCAATCGATTACGAGTTTAA
CAAATGGTATCACCTTTCATTGGAACAAATCTACATTGCCAATGACAATC
ACTACGTTTTGTCAGTCATGTTTAATCATCGTCAAATACTCCCAAAAAAT
GGAATTTTCATTAAAAACCCTAAAAAATTTAACAATGTGAAATGTTTTGC
TGGGCCACAAGATTTGCTAGCATTGAATGGACGAGTGAGTGGTTTGGAAT
ACAAACAGACTGCTTCAGATAAAAGTAAGATAGTTTATAGCGTTTAGACA
TTATGAAAAACTCACTATGGTCAAAGCCCTTAAACATTAACGTGTAACGG
CGCTCCATCATCAAAAGTGAAACCTAAAGTGGTGTTTTCGATACCCTTGT
CGCAAAAAATTTTCCTTCTATTTTCGTCATCAGTCCCTGCCCGCGCTGCT
TAGGGTTGATAGGTTTATTTTATAAGAATTTTTTCCAAATTCTGAGGAAA
ATTAAATTATAGACTTCAAAATTCTTCAAGTCTTCGGATGTTCTTAACTT
GTTGAGTTTTAAGCCTAAATATTTTACTAAAATGTTCTTATTTTAGTGAG
TACTTTTTCTATTTTCTCATAGGCTTCAAAACAAAATATTCGTTTCTGGT
TGACATCATTCCAACATGGCCTGGAACAAATTGGGAGATAAGCTTCAAAA
TCAGAGTGCATTCAATGAAAAGGGGTTCTTTTGAACATCCAATAAATGAT
TACCAAAATGTTTTTCAACTTGGGATCGGTGAAAATCATGGAAAGGATGG
TACACGGATCGCATCTCTTTTCATTCAAAAGCCATCCCGGAGATTTGTCT
TCTATGTAGATCGGTTAGTGAAAGCATGGTATGGGATTTCATCCGCGTCA
TCTTCTTACATCCAAGCTTTCGAATTTGACCAAGAATACAATATCAAAGT
CAATAAGTTTGGTGTTCACGTGCAAATTTTTATTGACAGTGATCGCCCGA
AAGCTAACTTTCAATTTTATGCTAACAGAGATTCCAACAATGTTCAATTA
CATTTCAGTAACCCTTGGTATGATAACGCAGATGCGACAATAACAAACTT
GAAATATAATTATTGAATTGAACACAACAGATTGGTATTACTCATTGATT
TTAAA

Coding sequence (CDS) from alignment at scaffold_358:856363..862267-

>TCONS_00061472 ID=TCONS_00061472|Name=TCONS_00061472|organism=Clytia hemisphaerica|type=CDS|length=5715bp|location=Sequence derived from alignment at scaffold_358:856363..862267- (Clytia hemisphaerica)
GCTTCAAAACAAAATATTCGTTTCTGGTTGACATCATTCCAACATGGCCT
GGAACAAATTGGGAGATAAGCTTCAAAATCAGAGTGCATTCAATGAAAAG
GGGTTCTTTTGAACATCCAATAAATGATTACCAAAATGTTTTTCAACTTG
GGATCGGTGAAAATCATGGAAAGGATGGTACACGGATCGCATCTCTTTTC
ATTCAAAAGCCATCCCGGAGATTTGTCTTCTATGTAGATCGGTTAGTGAA
AGCATGGTATGGGATTTCATCCGCGTCATCTTCTTACATCCAAGCTTTCG
AATTTGACCAAGAATACAATATCAAAGTCAATAAGTTTGGTGTTCACGTG
CAAATTTTTATTGACAGTGATCGCCCGAAAGCTAACTTTCAATTTTATGC
TAACAGAGATTCCAACAATGTTCAATTACATTTCAGTAACCCTTGGTATG
ATAACGCAGATGCGACAATAACAAACTTGAAATATAATTATTGAGCTTTA
TTTCCAATCGATTACGAGTTTAACAAATGGTATCACCTTTCATTGGAACA
AATCTACATTGCCAATGACAATCACTACGTTTTGTCAGTCATGTTTAATC
ATCGTCAAATACTCCCAAAAAATGGAATTTTCATTAAAAACCCTAAAAAA
TTTAACAATGTGAAATGTTTTGCTGGGCCACAAGATTTGCTAGCATTGAA
TGGACGAGTGAGTGGTTTGGAATACAAACAGACTGCTTCAGATAAAAAAT
TTCAACCTAAAAGGAACAACTTGGTCAATACCATACCCCTTCAGACGAAC
CAATGGGCTCTCTCATTCAAATTCATTATATATGACAAGCCTCCTGCAAG
CGACCAACAAAGTGGAATTTTAACATTTGCCACAACCAATGCGGACGGAC
TGATTCTTCAAAAGTTATTTGAAATTCGTGATAGTAAAAATTCTATGAGG
ATTTTTATTGTACAGCACAACTCAGATATTAAGAAACAATCAAACCAAGT
GCAAACAAACTTTTCGATTTCCGAAGTACCATGGTGATGACCAGATCTGT
CTGGTGATCGATGAACCGTTTAAAGATGTTGGTGATTCTCATTTGATTGA
TGCTCGTGGATGGAGATATTTCAAGAAAGAAATCGTCAGAAAGGCTTCAA
AACAAAATATTCGTTTCTGGTTGACATCATTCCAACATGGCCTGGAACAA
ATTGGGAGATAAGCTTCAAAATCAGAGTGCATTCAATGAAAAGGGGTTCT
TTTGAACATCCAATAAATGATTACCAAAATGTTTTTCAACTTGGGATCGG
TGAAAATCATGGAAAGGATGGTACACGGATCGCATCTCTTTTCATTCAAA
AGCCATCCCGGAGATTTGTCTTCTATGTAGATCGGTTAGTGAAAGCATGG
TATGGGATTTCATCCGCGTCATCTTCTTACATCCAAGCTTTCGAATTTGA
CCAAGAATACAATATCAAAGTCAATAAGTTTGGTGTTCACGTGCAAATTT
TTATTGACAGTGATCGCCCGAAAGCTAACTTTCAATTTTATGCTAACAGA
GATTCCAACAATGTTCAATTACATTTCAGTAACCCTTGGTATGATAACGC
AGATGCGACAATAACAAACTTGAAATATAATTATTGAGCTTTATTTCCAA
TCGATTACGAGTTTAACAAATGGTATCACCTTTCATTGGAACAAATCTAC
ATTGCCAATGACAATCACTACGTTTTGTCAGTCATGTTTAATCATCGTCA
AATACTCCCAAAAAATGGAATTTTCATTAAAAACCCTAAAAAATTTAACA
ATGTGAAATGTTTTGCTGGGCCACAAGATTTGCTAGCATTGAATGGACGA
GTGAGTGGTTTGGAATACAAACAGACTGCTTCAGATAAAAAATTTCAACC
TAAAAGGAACAACTTGGTCAATACCATACCCCTTCAGACGAACCAATGGG
CTCTCTCATTCAAATTCATTATATATGACAAGCCTCCTGCAAGCGACCAA
CAAAGTGGAATTTTAACATTTGCCACAACCAATGCGGACGGACTGATTCT
TCAAAAGTTATTTGAAATTCGTGATAGTAAAAATTCTATGAGGATTTTTA
TTGTACAGCACAACTCAGATATTAAGAAACAATCAAACCAAGTGCAAACA
AACTTTTCGATTTCCGAAGTACCATGGTGATGACCAGATCTGTCTGGTGA
TCGATGAACCGTTTAAAGATGTTGGTGATTCTCATTTGATTGATGCTCGT
GGATGGAGATATTTCAAGAAAGAAATCGTCAGAAAGGCTTCAAAACAAAA
TATTCGTTTCTGGTTGACATCATTCCAACATGGCCTGGAACAAATTGGGA
GATAAGCTTCAAAATCAGAGTGCATTCAATGAAAAGGGGTTCTTTTGAAC
ATCCAATAAATGATTACCAAAATGTTTTTCAACTTGGGATCGGTGAAAAT
CATGGAAAGGATGGTACACGGATCGCATCTCTTTTCATTCAAAAGCCATC
CCGGAGATTTGTCTTCTATGTAGATCGGTTAGTGAAAGCATGGTATGGGA
TTTCATCCGCGTCATCTTCTTACATCCAAGCTTTCGAATTTGACCAAGAA
TACAATATCAAAGTCAATAAGTTTGGTGTTCACGTGCAAATTTTTATTGA
CAGTGATCGCCCGAAAGCTAACTTTCAATTTTATGCTAACAGAGATTCCA
ACAATGTTCAATTACATTTCAGTAACCCTTGGTATGATAACGCAGATGCG
ACAATAACAAACTTGAAATATAATTATTGAGCTTTATTTCCAATCGATTA
CGAGTTTAACAAATGGTATCACCTTTCATTGGAACAAATCTACATTGCCA
ATGACAATCACTACGTTTTGTCAGTCATGTTTAATCATCGTCAAATACTC
CCAAAAAATGGAATTTTCATTAAAAACCCTAAAAAATTTAACAATGTGAA
ATGTTTTGCTGGGCCACAAGATTTGCTAGCATTGAATGGACGAGTGAGTG
GTTTGGAATACAAACAGACTGCTTCAGATAAAAAATTTCAACCTAAAAGG
AACAACTTGGTCAATACCATACCCCTTCAGACGAACCAATGGGCTCTCTC
ATTCAAATTCATTATATATGACAAGCCTCCTGCAAGCGACCAACAAAGTG
GAATTTTAACATTTGCCACAACCAATGCGGACGGACTGATTCTTCAAAAG
TTATTTGAAATTCGTGATAGTAAAAATTCTATGAGGATTTTTATTGTACA
GCACAACTCAGATATTAAGAAACAATCAAACCAAGTGCAAACAAACTTTT
CGATTTCCGAAGTACCATGGTGATGACCAGATCTGTCTGGTGATCGATGA
ACCGTTTAAAGATGTTGGTGATTCTCATTTGATTGATGCTCGTGGATGGA
GATATTTCAAGAAAGAAATCGTCAGAAAGGCTTCAAAACAAAATATTCGT
TTCTGGTTGACATCATTCCAACATGGCCTGGAACAAATTGGGAGATAAGC
TTCAAAATCAGAGTGCATTCAATGAAAAGGGGTTCTTTTGAACATCCAAT
AAATGATTACCAAAATGTTTTTCAACTTGGGATCGGTGAAAATCATGGAA
AGGATGGTACACGGATCGCATCTCTTTTCATTCAAAAGCCATCCCGGAGA
TTTGTCTTCTATGTAGATCGGTTAGTGAAAGCATGGTATGGGATTTCATC
CGCGTCATCTTCTTACATCCAAGCTTTCGAATTTGACCAAGAATACAATA
TCAAAGTCAATAAGTTTGGTGTTCACGTGCAAATTTTTATTGACAGTGAT
CGCCCGAAAGCTAACTTTCAATTTTATGCTAACAGAGATTCCAACAATGT
TCAATTACATTTCAGTAACCCTTGGTATGATAACGCAGATGCGACAATAA
CAAACTTGAAATATAATTATTGAGCTTTATTTCCAATCGATTACGAGTTT
AACAAATGGTATCACCTTTCATTGGAACAAATCTACATTGCCAATGACAA
TCACTACGTTTTGTCAGTCATGTTTAATCATCGTCAAATACTCCCAAAAA
ATGGAATTTTCATTAAAAACCCTAAAAAATTTAACAATGTGAAATGTTTT
GCTGGGCCACAAGATTTGCTAGCATTGAATGGACGAGTGAGTGGTTTGGA
ATACAAACAGACTGCTTCAGATAAAAAATTTCAACCTAAAAGGAACAACT
TGGTCAATACCATACCCCTTCAGACGAACCAATGGGCTCTCTCATTCAAA
TTCATTATATATGACAAGCCTCCTGCAAGCGACCAACAAAGTGGAATTTT
AACATTTGCCACAACCAATGCGGACGGACTGATTCTTCAAAAGTTATTTG
AAATTCGTGATAGTAAAAATTCTATGAGGATTTTTATTGTACAGCACAAC
TCAGATATTAAGAAACAATCAAACCAAGTGCAAACAAACTTTTCGATTTC
CGAAGTACCATGGTGATGACCAGATCTGTCTGGTGATCGATGAACCGTTT
AAAGATGTTGGTGATTCTCATTTGATTGATGCTCGTGGATGGAGATATTT
CAAGAAAGAAATCGTCAGAAAGGCTTCAAAACAAAATATTCGTTTCTGGT
TGACATCATTCCAACATGGCCTGGAACAAATTGGGAGATAAGCTTCAAAA
TCAGAGTGCATTCAATGAAAAGGGGTTCTTTTGAACATCCAATAAATGAT
TACCAAAATGTTTTTCAACTTGGGATCGGTGAAAATCATGGAAAGGATGG
TACACGGATCGCATCTCTTTTCATTCAAAAGCCATCCCGGAGATTTGTCT
TCTATGTAGATCGGTTAGTGAAAGCATGGTATGGGATTTCATCCGCGTCA
TCTTCTTACATCCAAGCTTTCGAATTTGACCAAGAATACAATATCAAAGT
CAATAAGTTTGGTGTTCACGTGCAAATTTTTATTGACAGTGATCGCCCGA
AAGCTAACTTTCAATTTTATGCTAACAGAGATTCCAACAATGTTCAATTA
CATTTCAGTAACCCTTGGTATGATAACGCAGATGCGACAATAACAAACTT
GAAATATAATTATTGAGCTTTATTTCCAATCGATTACGAGTTTAACAAAT
GGTATCACCTTTCATTGGAACAAATCTACATTGCCAATGACAATCACTAC
GTTTTGTCAGTCATGTTTAATCATCGTCAAATACTCCCAAAAAATGGAAT
TTTCATTAAAAACCCTAAAAAATTTAACAATGTGAAATGTTTTGCTGGGC
CACAAGATTTGCTAGCATTGAATGGACGAGTGAGTGGTTTGGAATACAAA
CAGACTGCTTCAGATAAAAAATTTCAACCTAAAAGGAACAACTTGGTCAA
TACCATACCCCTTCAGACGAACCAATGGGCTCTCTCATTCAAATTCATTA
TATATGACAAGCCTCCTGCAAGCGACCAACAAAGTGGAATTTTAACATTT
GCCACAACCAATGCGGACGGACTGATTCTTCAAAAGTTATTTGAAATTCG
TGATAGTAAAAATTCTATGAGGATTTTTATTGTACAGCACAACTCAGATA
TTAAGAAACAATCAAACCAAGTGCAAACAAACTTTTCGATTTCCGAAGTA
CCATGGTGATGACCAGATCTGTCTGGTGATCGATGAACCGTTTAAAGATG
TTGGTGATTCTCATTTGATTGATGCTCGTGGATGGAGATATTTCAAGAAA
GAAATCGTCAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038558XLOC_038558Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061472-proteinTCONS_00061472-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061472-exon-scaffold_358-1575043694:862151..862267TCONS_00061472-exon-scaffold_358-1575043694:862151..862267Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1575043694:860357..860399TCONS_00061472-exon-scaffold_358-1575043694:860357..860399Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1575043694:859542..859777TCONS_00061472-exon-scaffold_358-1575043694:859542..859777Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1575043694:857244..857496TCONS_00061472-exon-scaffold_358-1575043694:857244..857496Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1575043694:856363..856895TCONS_00061472-exon-scaffold_358-1575043694:856363..856895Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1510915933:862151..862267TCONS_00061472-exon-scaffold_358-1510915933:862151..862267Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1510915933:860357..860399TCONS_00061472-exon-scaffold_358-1510915933:860357..860399Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1510915933:859542..859777TCONS_00061472-exon-scaffold_358-1510915933:859542..859777Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1510915933:857244..857496TCONS_00061472-exon-scaffold_358-1510915933:857244..857496Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1510915933:856363..856895TCONS_00061472-exon-scaffold_358-1510915933:856363..856895Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1491911889:862151..862267TCONS_00061472-exon-scaffold_358-1491911889:862151..862267Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1491911889:860357..860399TCONS_00061472-exon-scaffold_358-1491911889:860357..860399Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1491911889:859542..859777TCONS_00061472-exon-scaffold_358-1491911889:859542..859777Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1491911889:857244..857496TCONS_00061472-exon-scaffold_358-1491911889:857244..857496Clytia hemisphaericaexon
TCONS_00061472-exon-scaffold_358-1491911889:856363..856895TCONS_00061472-exon-scaffold_358-1491911889:856363..856895Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:856363..862267 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.106669	0	0	0.688399	0.388559	0.0468779	0.13166	0.061452	0	0	0	0.0969995	0	0.0207045	0.0222191	0.958022	0.448888	0.232561	0.0811194	1.4454	1.08332	0.501682	0.798179	1.25273	2.34088	0	0	0.0809404	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061472 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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