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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061777 ID=TCONS_00061777|Name=TCONS_00061777|organism=Clytia hemisphaerica|type=transcript|length=2644bp
GTAGTGACATTCTCCAGCCTTAGAGATGAATTAATTTTGTGATATGATTG
TTAACCGAACCACCGGATACTCATGCGTCATTGTTTTCTCACCGGAATTA
TATGCCGGTCGCTTCTTTACCCGGTATTTTTCTCTTTATGACGCGATCCC
GAACCTATTTGGTCAGCGGCTGAAAATCAATATAAGAAAAACgcaatcaa
aatggtagcaaaGTTACGGTGATAATATGACCTGATTTTTTCCTGGAAGT
TtatcacttttgttttgatcCAAAGATCCCCAAGTAAATTGCTTTTATGG
AACGTCAAAGATAATCAAGACTCGAAAAGTTCAAAGCATAGCTGAATTTA
AATTTCTACTTCGTTAGTGGATGTATTGGTAGACTGTTTGAGCACTTTTT
TATCAACAAACTGACAAAAAATCAgaccaaaaaacaacaacaactggCTT
TTGTTGATCTGttcatcacattttgtatattGCTACATTAAGACTTTTTA
CATTAAAATAAACAGACATGACTCAAAGGAGAAGTGGTGGTCTTGTCCAA
AGAAATAAGGGATTGGCACAACAAGAGGCACCATCATTTGGAGATAATCA
CAAAGTTATCACAAGTCCTGATCAAAATGATGAAGAATCAGAAGAATCTA
TGGATAAACAGACTAGATTAACATTAATGGAGGAGGTTTTGTTGTTGGGA
CTTAAAGATAAAGAGGGTTACACATCCTTTTGGAACGATTGTATTTCCTC
GGGTCTTCGTGGTTGTATGATGATCGAACTTGGTTTACGCGGTCGTGTTG
ATCTGGAAAAAACTGGAATGCGACGTAAAAGTTTGCTTAATCGTAAAGTG
ATGTTTTTAAACGAATCACCTACGGGAGATACCATATTAGATGAAGCACA
GAAGCTGATTAAGGATACCGATCCTCAAGAAACTATACCTACGTGGATTG
AATTGCTCAGTGGCGAGACATGGAACCCATTGAAGTTGAAATATCAATTA
CGTAATGTTCGTGAAAGATTAGCGAAGAATTTGGTTGAGAAAGGTGTACT
GACAACAGAAAAGCAGAACTTTTTATTATTTGACATGACAACACATCCAG
TGAACGATGGGCAAATCAAACAACGTGTCGtaaaaaaagttcaagaatCA
GTTCTCACAAGATGGGTCAATGATCCGCATCGAATGGATAAGCGTACGCT
CGCTCTCATTTATTTGGCGCATTCGTCTGACGTTCTCGAAAACGCGTTCG
CTCCGCTCAACGATGAAGATTATGATTTAGCGACGAAAAGAGTTCGCGAA
CTTTTAGATTTGGATCCTGAGGTGGAAGCTCAAAAACCGAATGCTAATGA
AGTTATGTGGTCCGTTATTGCGTCATTCATTAAATAGGATGTGCGAAAAC
CATGTTGGTTTTCGGTATTAATGAGGATGTGCGAAAACCATGTGGTTCAT
TGAtctggattttttttatttattaaacAATGAATATGGTCTTGTCTTAT
AACTTTTGTTATAAAACGTTGTAATACCTGATTattaaaagtagaatttt
tttgtttaaataagTTTTTTCCTGGAGTGGTGGTTTAAAGCACAGAGGAT
CCAATAGAAAATACCTCATTAAGAACAAATGAATAGTTTTGGGGAATTTT
TAATGCGATACTCTGATACACatatcaaagtatctcaaaacATTCTAAAA
TTAAGAGCGTTTTTACTTTACTTAGCTtacatgaaaaatgaaatgaaaaa
tatcaattATTCCTTCAGTAGCCGAATTTTGATTCGATTTTCAGTAttca
attttgcaaaaaattttaaaccgtTTTGCTGTtaaaagtacacgtttttt
tataagaacatccaacatttttgaagcctttggatgttcttaactttttg
ggttacaagcctaaaaatgtttttaaaatgttcttattttcaccattttg
tgaccattttcacccatttttctaagaaaacgggtgtttttgagtccaca
aagccttaaaatgttcttaacttgtttttaaccattttggccatcgaagc
ctttatgttcttatatagtttgttcttataaaaaaacgtgtattttggAA
TACATGATAAGCAAGCTCCGGTAAAATtcttgttaatttcattaatatTT
ACAATAGGGTGAATGGTATAAGTTATGGCATAGTTGGGCTacgatgaaaa
tatttttgttttgagtaacTCGGATCAATCATCTAAAAGGatcatataat
atttttttacgtTATATATATGATCCTAAGCTTTCCAAAGACTAAGCAAT
AATATGGTAaggtaattagtttttaaatTAAACTTAGAGAAATGCTGAAA
GTTTCTCAATACGTCCTCGTTCCAGTTTGTCTCGATCACTTTTTCCAGAC
TAGATATCGAGCAACTTTCTTGTTGTCTCTCTCTTTAATTAAAACGTGTA
GGGTATATTATCTCATCATGATCATTATTATTGTAAAACTATTATAATTA
ttcgtttattttttatatactttttaaaTGTTATTTCCTAGAAGCAGGTA
CAGTAGTAAGTAAAGTAAtgtcattttacttttttggtCAAATCTGGAAA
CAAAAACcaatcattattattattaaccgCCAGACTCTTTTTTG Run BLAST on NCBI protein sequence of TCONS_00061777-protein >TCONS_00061777-protein ID=TCONS_00061777-protein|Name=TCONS_00061777-protein|organism=Clytia hemisphaerica|type=polypeptide|length=289bp
MTQRRSGGLVQRNKGLAQQEAPSFGDNHKVITSPDQNDEESEESMDKQTR
LTLMEEVLLLGLKDKEGYTSFWNDCISSGLRGCMMIELGLRGRVDLEKTG
MRRKSLLNRKVMFLNESPTGDTILDEAQKLIKDTDPQETIPTWIELLSGE
TWNPLKLKYQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHPVNDGQI
KQRVVKKVQESVLTRWVNDPHRMDKRTLALIYLAHSSDVLENAFAPLNDE
DYDLATKRVRELLDLDPEVEAQKPNANEVMWSVIASFIK Run BLAST on NCBI transcript from alignment at scaffold_360:9041..16672+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061777 ID=TCONS_00061777|Name=TCONS_00061777|organism=Clytia hemisphaerica|type=transcript|length=7632bp|location=Sequence derived from alignment at scaffold_360:9041..16672+ (Clytia hemisphaerica)
GTAGTGACATTCTCCAGCCTTAGAGATGAATTAATTTTGTGATATGATTG
TTAACCGAACCACCGGATACTCATGCGTCATTGTTTTCTCACCGGAATTA
TATGCCGGTCGCTTCTTTACCCGGTATTTTTCTCTTTATGACGCGATCCC
GAACCTATTTGGTCAGCGGCTGAAAATCAATATAAGAAAAACgcaatcaa
aatggtagcaaaGTTACGGTGATAATATGACCTGATTTTTTCCTGGAAGT
TtatcacttttgttttgatcCAAAGATCCCCAAGTAAATTGCTTTTATGG
AACGTCAAAGATAATCAAGACTCGAAAAGTTCAAAGCATAGCTGAATTTA
AATTTCTACTTCGTTAGTGGATGTATTGGTAGACTGTTTGAGCACTTTTT
TATCAACAAACTGACAAAAAATCAgaccaaaaaacaacaacaactggCTT
TTGTTGATCTGttcatcacattttgtatattGCTACATTAAGACTTTTTA
CATTAAAATAAACAGACATGACTCAAAGGAGAAGTGGTGGTCTTGTCCAA
AGAAATAAGGGATTGGCACAACAAGAGGCACCATCATTTGGAGATAATCA
CAAAGTTATCACAAGTCCTGATCAAAATGATGAAGAATCAGAAGAATCTA
TGGATAAACAGACTAGATTAACATTAATGGAGGAGGTTTTGTTGTTGGGA
CTTAAAGATAAAGAGgtataatttaaaatttagacaaaaaataaggtTGT
GATGGAAAAAGAAGATCAGGGAGCCCTGGCAGTTTTTTCATGAGATTTCA
TTGAGATTTTAGACCTTTCCTTATTTACAGGGAAAGGGACAATAAACATA
GTCGTCTAAAAATACggctatttttttttagaatcaaccttacaatctag
tttttatatttataaaaactagattgctgacgtgtggaaaggaatgtcgg
cgtgactgatccttttgtttcgataataacatcaaagcgggaactaattt
tcttctcctttctttctttcctttttctttctcgtaAGTTCACCCTTTCC
CTCACACTCTCCAAGCGTGGTTAggtggcaatcacaaatatcttcatttc
gcgtcctcgttggatctacaaagtgagtcggtcggtggTCGGTCggtaat
tttcttaaaattggtctGTGAGGCGGTAAAAGGTAAAGGGCGTTAACTGA
GGCGGCAGAGGCCCAAACGCGTGTACTAGTATGTTTTGCGTGGTTTCAGA
TTATGAAGTTTAAACACTGTGACCTTTGACAAATAATGGTACGTGTAATG
ATAAACGAAGTTAAAATGCTGTGAATGCGCTAAAAACCGCTTACAAAAat
tggcaataataaaatttttgagcaaaggaaacgtcatcaaattcaaaaca
aaaagtctgAAGAATTTACCGACTCTCCGACTCAAATTTACTCAATTTTC
aggagtcggtcgggcgacgcgaaacgaagatatttgtgattgccgcctta
gcTCAAGCAGTTAGAGCGTCTGTCTCACAAGTatgggtttccgagttcga
tcccgctgggtgtcaaatttttcaatttttcaaatttctttttttaattc
tctttctattataatgaaggtcaatcaaacaagtaactagcatatattac
ctccgctctctgtgtaaggtttagataagctatgatagcatcTATATAAG
AACtttcttaagtttttttttcttcaatcttttttttaccacaagcgatt
attcaaggctgagatatagaagaacaGGAATAGGCGTTTTCGCCTGCGTT
TGGTGACTGacagtttcactttcactttcactagtttcactttcagccag
caAGTTAGCCAGCGAGCGATTTTTTGTAAGAGAACCGTACATTTTTTATC
GACATGGTGAAcaggtttccccgatttccagatatttaaaaattggaact
ttcccgtgggcgcgattgggcgtaccgccatcgcgaaatatttttcgtga
aaatttaccatattctaacgctaatataatctagataggaaacaaatatt
aaatctGACTCTTTTTTGGTTGTACTTCTAAATTGTAcaataaaaagaac
tatttacaaattattttctttaacgggcgttgaatcgatattgacatatt
taatgatgtcataattcatgccatgcatattttgtcaacatccttttcat
tggataaataccataaaaataaattatacaagatgagtaaacataaattt
atcgcccgcgagcacgacTTAGCTAAGCGCagctctcttattcattatct
aagaattgaagtgGGCAAAGATTACTGCGCAGACTGATGGCggacaaagg
ttatttgaagatattttcagttataatccaaggtagaacaaactaaacat
agaaagggggtattttttagtgctctataagatgatcggtattttttttg
aattctatgtttagatttttctacccagcccagttgctatgtacgcgcgt
cctgttgctaagatctttgcttgaaatcgaaagtgaaaccaaaataattt
agcacACACTGCCATTCGCGTAATATTGATAAAGTGAAAGGAAACCCTGA
Ctgccctccactgatgcaagttacccgacttcgcggtataaaattcctta
tagaaagacacattctcctacagagaggcttcaaaaatatgaggtagaaa
aaagttgtcattTTATCTTAACAATTTCATAAACTACGTCACAACCACGg
agcgctgacttttagttttatggCTTGTTCTCACTCGTTTGGTttccgta
ataaaaagaaagtcattattgtgaactttgaacgTGCTTAAAATTGAGTT
ACTTCCACTAACTGAtatatagaaataacagagtagccggCTATTTTTGT
AGATGCTAAATCTAGTCGCAGAATTCTACTGGCTGTTAAACAAGTGTTGA
AATCGCGTGAtgctattttttttattggaagTGCgcaaatctgattggtt
aaccTTATCAACAGCTTTTTTAgcacgaaattcaaaccaaatgttaataa
attcaaactgggtcatgAATATCATACTCTCATTGAGCAGCTTCTGATGG
GATTTTTGCCTATATATGTGGTGTAAGACTAGGACAAAAAACGCTTCTTC
TCATCAAGGGCAAAAAGTTCAACATTTTACGTGCAGCATTTGTAATTAGT
CTGCCATCTTTTTATTCCCAAAATGTTACTGTATTCATTTTATTAACCAC
CCATTCAGCAAAACATTGCCTCTCCCtgctttaaaaagatgtttttgatA
ATGCCCTCTGcattgaatagaccttttgttAATCACAGTACTATTTTGAC
TCCACAAATATATCTTTTCAGTAATTCAAACTTCCCAGAAAAAATCTGCG
CTCCACTGTTGTGTATAAAAATGTTTGGGAGGTACAAGAACGCATTTTTG
CCTGCAAGGGGTTTGGGAAAGTGGGTTTGCagcttttaacttttgaaaca
atttttagGGTGGTATGATTTCATAGaaagaacatactaaaatttgaggg
gattttgattgacagaacttaagaaaagctaaaaaaaaactttctctaaG
GAAACGCAggtaaaaacaggtttttttacctccaaagagcaaacggtgga
gagcatcaaaataatgcgcgcttATCTGTTTTACAAACTACAAGAAAGGT
GTATCAGGATGTCATGTTGGatgattaaaaactccagcatcaaaacattA
CAGGAAAGAAATTATATGGTTCACActtaataattatgcattggggtatt
ccattttcaaataaaactgGGGTATTGACAAACTTCAAGCCGCTAGAGTA
GATGCACAGATCGCTTGGCGGGCGTGGTACACCGCAGGAGTTTGTATATT
TTGTGATGACAGACAAGCCATAAAGTTTTATTACCTGtaaacttttaaaa
taaatcaaaatatgtgGAATTGTTAGAATTAGCATAGATTTAGGCCATCT
TTAGATAGTGAGAAATGGTGGGTTTCTTCGGGGGTAGGTTTATTGCGAAA
AACAGAGCAAAATTCATTGATCTTTAAAAACCTAATTCTAATGCACTATT
TGGCTTCTCATAGTCTTTTTTTAAGGGGGGATCcgagttttcaaggaagg
ctttatagggggggatgggcaattttccagttaaaatggggggtttgagc
ttatagggggggggggtcaaataaaaatgagggggatagtaactttttgg
ttaaaaaaatttttttttatgttacatgttgatttaagtcaataaaattt
aatatcacATAATTTCGACTTTATCTGATTTATTCTCACTGCACTCTGTT
TTGAATcagattttgtttttccttgttttttaactattgccaataaaaat
gtacaaattatatgctgggggctcggacccctgtaaatggtgcgggatca
aaaaattttaaaaatagggggggatacctttatagggggggtGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNttcagacccctctgcacactatgctTCTATGGGACAC
AATCCTATGATAGCAATTAATAGATTCTTTTATCCTTTTCGAGTCTCAGC
gatcatatttatttatttattttagaatcAATGATCTTATTTGCTTTTCT
TTTAGGGTTACACATCCTTTTGGAACGATTGTATTTCCTCGGGTCTTCGT
GGTTGTATGATGATCGAACTTGGTTTACGCGGTCGTGTTGATCTGGAAAA
AACTGGAATGCGACGTAAAAGTTTGCTTAATCGTAAAGTGATGTTTTTAA
ACGAATCACCTACGGGAGATACCATATTAGATGAAGCACAGAAGCTGATT
AAGGATACCGATCCTCAAGAAACTATACCTACGTGGATTGAATTGCTCAG
TGGTAAGATGTCGGTTAATTTTTAGTGATCATCCTATCGTACTTGAATGG
gcttttcgagaattttttttcaagtaaaaaatacgatatccaggggataa
gcatctttataagagaggatatccagggggttgagcttATTTTTAAGAGT
GAATATCCGGGGGGTTGGATACTTCAAAAAatcgatatcctcaacagtgg
gggtaaaagtttttttctggaaaagccaaaTATTTCAGTGTAGAGTGCGG
TACCCAGTTGGCTTGATAACCTAGTTGGCGTAAATTTCGACTTTGGGTAC
TAATTGGACAAAGTTTATAGCGTTTCAGAGAAAAGGAGGTTCGGAGTCTT
TAAAGGGGTATCTTTTAGTGGCTTATAGATAAACGGGAATCTTTATAAAC
TCACGCCAACTGGATATCTATATGCTTGCAATTGATCATATTGTACATGG
AATTTTAGCATCTAAATTTACGTCATTTTCGCTCCCCGCTTATCGGATTA
ACCTTCGTGATACTAAATCTCGTACTatcgcaaatttttttctctcctga
TTTCACGTGAAAATGCCGACACGTGAAATCAAATCCATTGAAATGTCTAT
TTTACTTTCTGtgcaaaatcttcttttttctgatttcaatGTCCTCTTGT
TTGAAATTAAATCAAACAAACTTGCTTTTCCTTGTTTGGCCTGAGTAATC
TATACctcaagggaactaatttttgaggatatttagtaaaaattgcattt
cgcggaactaattttcgcagtagacacccaaaaacgtGGAAAGTTCCcgg
gaaaattagttccctcaCCTAaggttttcagaatttttgtgttttttttt
gtctataTTTTGACTTTAGGTCGACCAAAAGATACTCTCCTTTATTTCAG
GCGAGACATGGAACCCATTGAAGTTGAAATATCAATTACGTAATGTTCGT
GAAAGATTAGCGAAGAATTTGGTTGAGAAAGGTGTACTGACAACAGAAAA
GCAGAACTTTTTATTATTTGACATGACAACACATCCAGTGAACGATGGGC
AAATCAAACAACGTGTCGtaaaaaaagttcaagaatCAGTTCTCACAAGA
TGGGTCAATGATCCGCATCGAATGGATAAGCGTACGCTCGCTCTCATTTA
TTTGGCGCATTCGTCTGACGTTCTCGAAAACGCGTTCGCTCCGCTCAACG
ATGAAGATTATGATTTAGCGACGAAAAGAGTTCGCGAACTTTTAGATTTG
GATCCTGAGGTGGAAGCTCAAAAACCGAATGCTAATGAAGTTATGTGGTC
CGTTATTGCGTCATTCATTAAATAGGATGTGCGAAAACCATGTTGGTTTT
CGGTATTAATGAGGATGTGCGAAAACCATGTGGTTCATTGAtctggattt
tttttatttattaaacAATGAATATGGTCTTGTCTTATAACTTTTGTTAT
AAAACGTTGTAATACCTGATTattaaaagtagaatttttttgtttaaata
agTTTTTTCCTGGAGTGGTGGTTTAAAGCACAGAGGATCCAATAGAAAAT
ACCTCATTAAGAACAAATGAATAGTTTTGGGGAATTTTTAATGCGATACT
CTGATACACatatcaaagtatctcaaaacATTCTAAAATTAAGAGCGTTT
TTACTTTACTTAGCTtacatgaaaaatgaaatgaaaaatatcaattATTC
CTTCAGTAGCCGAATTTTGATTCGATTTTCAGTAttcaattttgcaaaaa
attttaaaccgtTTTGCTGTtaaaagtacacgtttttttataagaacatc
caacatttttgaagcctttggatgttcttaactttttgggttacaagcct
aaaaatgtttttaaaatgttcttattttcaccattttgtgaccattttca
cccatttttctaagaaaacgggtgtttttgagtccacaaagccttaaaat
gttcttaacttgtttttaaccattttggccatcgaagcctttatgttctt
atatagtttgttcttataaaaaaacgtgtattttggAATACATGATAAGC
AAGCTCCGGTAAAATtcttgttaatttcattaatatTTACAATAGGGTGA
ATGGTATAAGTTATGGCATAGTTGGGCTacgatgaaaatatttttgtttt
gagtaacTCGGATCAATCATCTAAAAGGatcatataatatttttttacgt
TATATATATGATCCTAAGCTTTCCAAAGACTAAGCAATAATATGGTAagg
taattagtttttaaatTAAACTTAGAGAAATGCTGAAAGTTTCTCAATAC
GTCCTCGTTCCAGTTTGTCTCGATCACTTTTTCCAGACTAGATATCGAGC
AACTTTCTTGTTGTCTCTCTCTTTAATTAAAACGTGTAGGGTATATTATC
TCATCATGATCATTATTATTGTAAAACTATTATAATTAttcgtttatttt
ttatatactttttaaaTGTTATTTCCTAGAAGCAGGTACAGTAGTAAGTA
AAGTAAtgtcattttacttttttggtCAAATCTGGAAACAAAAACcaatc
attattattattaaccgCCAGACTCTTTTTTG Coding sequence (CDS) from alignment at scaffold_360:9041..16672+ >TCONS_00061777 ID=TCONS_00061777|Name=TCONS_00061777|organism=Clytia hemisphaerica|type=CDS|length=2610bp|location=Sequence derived from alignment at scaffold_360:9041..16672+ (Clytia hemisphaerica)
ATGACTCAAAGGAGAAGTGGTGGTCTTGTCCAAAGAAATAAGGGATTGGC
ACAACAAGAGGCACCATCATTTGGAGATAATCACAAAGTTATCACAAGTC
CTGATCAAAATGATGAAGAATCAGAAGAATCTATGGATAAACAGACTAGA
TTAACATTAATGGAGGAGGTTTTGTTGTTGGGACTTAAAGATAAAGAGGG
TTACACATCCTTTTGGAACGATTGTATTTCCTCGGGTCTTCGTGGTTGTA
TGATGATCGAACTTGGTTTACGCGGTCGTGTTGATCTGGAAAAAACTGGA
ATGCGACGTAAAAGTTTGCTTAATCGTAAAGTGATGTTTTTAAACGAATC
ACCTACGGGAGATACCATATTAGATGAAGCACAGAAGCTGATTAAGGATA
CCGATCCTCAAGAAACTATACCTACGTGGATTGAATTGCTCAGTGGCGAG
ACATGGAACCCATTGAAGTTGAAATATCAATTACGTAATGTTCGTGAAAG
ATTAGCGAAGAATTTGGTTGAGAAAGGTGTACTGACAACAGAAAAGCAGA
ACTTTTTATTATTTGACATGACAACACATCCAGTGAACGATGGGCAAATC
AAACAACGTGTCGtaaaaaaagttcaagaatCAGTTCTCACAAGATGGGT
CAATGATCCGCATCGAATGGATAAGCGTACGCTCGCTCTCATTTATTTGG
CGCATTCGTCTGACGTTCTCGAAAACGCGTTCGCTCCGCTCAACGATGAA
GATTATGATTTAGCGACGAAAAGAGTTCGCGAACTTTTAGATTTGGATCC
TGAGGTGGAAGCTCAAAAACCGAATGCTAATGAAGTTATGTGGTCCGTTA
TTGCGTCATTCATTAAATAGATGACTCAAAGGAGAAGTGGTGGTCTTGTC
CAAAGAAATAAGGGATTGGCACAACAAGAGGCACCATCATTTGGAGATAA
TCACAAAGTTATCACAAGTCCTGATCAAAATGATGAAGAATCAGAAGAAT
CTATGGATAAACAGACTAGATTAACATTAATGGAGGAGGTTTTGTTGTTG
GGACTTAAAGATAAAGAGGGTTACACATCCTTTTGGAACGATTGTATTTC
CTCGGGTCTTCGTGGTTGTATGATGATCGAACTTGGTTTACGCGGTCGTG
TTGATCTGGAAAAAACTGGAATGCGACGTAAAAGTTTGCTTAATCGTAAA
GTGATGTTTTTAAACGAATCACCTACGGGAGATACCATATTAGATGAAGC
ACAGAAGCTGATTAAGGATACCGATCCTCAAGAAACTATACCTACGTGGA
TTGAATTGCTCAGTGGCGAGACATGGAACCCATTGAAGTTGAAATATCAA
TTACGTAATGTTCGTGAAAGATTAGCGAAGAATTTGGTTGAGAAAGGTGT
ACTGACAACAGAAAAGCAGAACTTTTTATTATTTGACATGACAACACATC
CAGTGAACGATGGGCAAATCAAACAACGTGTCGtaaaaaaagttcaagaa
tCAGTTCTCACAAGATGGGTCAATGATCCGCATCGAATGGATAAGCGTAC
GCTCGCTCTCATTTATTTGGCGCATTCGTCTGACGTTCTCGAAAACGCGT
TCGCTCCGCTCAACGATGAAGATTATGATTTAGCGACGAAAAGAGTTCGC
GAACTTTTAGATTTGGATCCTGAGGTGGAAGCTCAAAAACCGAATGCTAA
TGAAGTTATGTGGTCCGTTATTGCGTCATTCATTAAATAGATGACTCAAA
GGAGAAGTGGTGGTCTTGTCCAAAGAAATAAGGGATTGGCACAACAAGAG
GCACCATCATTTGGAGATAATCACAAAGTTATCACAAGTCCTGATCAAAA
TGATGAAGAATCAGAAGAATCTATGGATAAACAGACTAGATTAACATTAA
TGGAGGAGGTTTTGTTGTTGGGACTTAAAGATAAAGAGGGTTACACATCC
TTTTGGAACGATTGTATTTCCTCGGGTCTTCGTGGTTGTATGATGATCGA
ACTTGGTTTACGCGGTCGTGTTGATCTGGAAAAAACTGGAATGCGACGTA
AAAGTTTGCTTAATCGTAAAGTGATGTTTTTAAACGAATCACCTACGGGA
GATACCATATTAGATGAAGCACAGAAGCTGATTAAGGATACCGATCCTCA
AGAAACTATACCTACGTGGATTGAATTGCTCAGTGGCGAGACATGGAACC
CATTGAAGTTGAAATATCAATTACGTAATGTTCGTGAAAGATTAGCGAAG
AATTTGGTTGAGAAAGGTGTACTGACAACAGAAAAGCAGAACTTTTTATT
ATTTGACATGACAACACATCCAGTGAACGATGGGCAAATCAAACAACGTG
TCGtaaaaaaagttcaagaatCAGTTCTCACAAGATGGGTCAATGATCCG
CATCGAATGGATAAGCGTACGCTCGCTCTCATTTATTTGGCGCATTCGTC
TGACGTTCTCGAAAACGCGTTCGCTCCGCTCAACGATGAAGATTATGATT
TAGCGACGAAAAGAGTTCGCGAACTTTTAGATTTGGATCCTGAGGTGGAA
GCTCAAAAACCGAATGCTAATGAAGTTATGTGGTCCGTTATTGCGTCATT
CATTAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061777-exon-scaffold_360-1491911889:9041..9755 | TCONS_00061777-exon-scaffold_360-1491911889:9041..9755 | Clytia hemisphaerica | exon |
| TCONS_00061777-exon-scaffold_360-1510915933:9041..9755 | TCONS_00061777-exon-scaffold_360-1510915933:9041..9755 | Clytia hemisphaerica | exon |
| TCONS_00061777-exon-scaffold_360-1575043694:9041..9755 | TCONS_00061777-exon-scaffold_360-1575043694:9041..9755 | Clytia hemisphaerica | exon |
| TCONS_00061777-exon-scaffold_360-1491911889:13846..14092 | TCONS_00061777-exon-scaffold_360-1491911889:13846..14092 | Clytia hemisphaerica | exon |
| TCONS_00061777-exon-scaffold_360-1510915933:13846..14092 | TCONS_00061777-exon-scaffold_360-1510915933:13846..14092 | Clytia hemisphaerica | exon |
| TCONS_00061777-exon-scaffold_360-1575043694:13846..14092 | TCONS_00061777-exon-scaffold_360-1575043694:13846..14092 | Clytia hemisphaerica | exon |
| TCONS_00061777-exon-scaffold_360-1491911889:14991..16672 | TCONS_00061777-exon-scaffold_360-1491911889:14991..16672 | Clytia hemisphaerica | exon |
| TCONS_00061777-exon-scaffold_360-1510915933:14991..16672 | TCONS_00061777-exon-scaffold_360-1510915933:14991..16672 | Clytia hemisphaerica | exon |
| TCONS_00061777-exon-scaffold_360-1575043694:14991..16672 | TCONS_00061777-exon-scaffold_360-1575043694:14991..16672 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_360 | supercontig | scaffold_360:9041..16672 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR008628 | GPP34-like |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0070273 | phosphatidylinositol-4-phosphate binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0070273 |
phosphatidylinositol-4-phosphate binding |
Blast
BLAST of TCONS_00061777 vs. Swiss-Prot (Human)
Match: GOLP3 (Golgi phosphoprotein 3 OS=Homo sapiens GN=GOLPH3 PE=1 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 3.971e-126 Identity = 206/303 (67.99%), Postives = 239/303 (78.88%), Query Frame = 2
Query: 512 TDMTQRRSGGLVQR----NKGLAQQEAPSFGDNHKVITSPDQNDEESEESM--------DKQTRXXXXXXXXXXXXKDKEGYTSFWNDCISSGLRGCMMIELGLRGRVDLEKTGMRRKSLLNRKVMFLNESPTGDTILDEAQKLIKDTDPQETIPTWIELLSGETWNPLKLKYQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHPVNDGQIKQRVVKKVQESVLTRWVNDPHRMDKRTLALIYLAHSSDVLENAFAPLNDEDYDLATKRVRELLDLDPEVEAQKPNANEVMWSVIASFIK 1384
T +TQR S GLVQR ++ A +E + G ++D +S K+TRLTLMEEVLLLGLKD+EGYTSFWNDCISSGLRGCM+IEL LRGR+ LE GMRRKSLL RKV+ +++PTGD +LDEA K +K+T P ET+ WIELLSGETWNPLKL YQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHP+ + IKQR++KKVQE+VL +WVNDPHRMD+R LALIYLAH+SDVLENAFAPL DE YDLATKRVR+LLDLDPEVE K N NEV+W+V+A+F K
Sbjct: 2 TSLTQR-SSGLVQRRTEASRNAADKERAAGGG-----AGSSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKVICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRMDRRLLALIYLAHASDVLENAFAPLLDEQYDLATKRVRQLLDLDPEVECLKANTNEVLWAVVAAFTK 298
The following BLAST results are available for this feature:
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