TCONS_00061997 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061997
Unique NameTCONS_00061997
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3096

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061997 ID=TCONS_00061997|Name=TCONS_00061997|organism=Clytia hemisphaerica|type=transcript|length=3096bp
AGTGGAAAGTAAGTGCATTTCCGAGTattctgtaccagagtgtattttta
cgtttatcgtttcgtagtacactctgttcGCATTGTCTGcttgataaaaa
attcccgtactgcgatgaagtttgatttataaatagcaaaacTTCTCACG
ACGTCTCCCCTCGCTGACCCGCACTCCATCAGAGAGgccggtttgaaaaa
tctcaaatcagaaaagacaatgacaacagactctctacggcaatgaattt
tgaaattcgtgTACATGCTAATTTCCGAGGGACCTAACGGTGTTATTACG
ACAACTAAGCCAAAGTGTGTAAGTGATAGCAGTGATGGACTATTgaatca
tatttttttattattttacagGAATTTCCAATAAATCGGCTCGAGTTACC
CAAGAGCTTGACTTTCGACTTGCGCTGCAAGATGTGGCTGAAGAACATCG
TTCCCAAAGCCCCGTCCAACGGAAACTACCACCTTCATCACGCAAAACCG
CTCCTAACAACGCTACTTTAAGTGGCCATGCAATTGGATCGAAAGGCGAT
CACGCCGAACCCATTAACCAGGTTCAGCAACCGATCGCTCCAGGCGGACA
ACCCATGCTCTCCCAATCACCACCACCACCCTACAAGCCAAGCGAAAACG
ACTTTGATGGTCCATCTCAAAGTCAGCCCCATGGCCAAACTAATCCTCAA
GGTCAAGCCCAGTCTCAACCACAAGGCCAAGCCAACCCTCAACCACAAAG
CTACGACCAGCCTCAATCGCAAGGTCAAGCCCAACCTCAGCTGCAAGGTC
AAGGTCAAGGTCAGGCCCAGCCTAAGCCTCTAAGTGCACAAGGTCGACCG
ATACCAACCAGTAGCGTTACTCCTCCTCTAGAGGACCCACGTCCTTTGAG
TGGTCATGCCAATAACCAACAACAAAGACAACCGTCTATGACTGACGCAC
GAGCTGAAGCAGCCGAATCTTCAAGATCGAGACAGCACATTCCTGCTCCA
CCCAGTTCGCACAGCCGAAAAACATCTTTTCATAATTCTAGACGCAGTTC
ACTTATCAACCAACGGTTGTCATCTCTTAAGGGAAATCCTTCTTTCAATG
ACACCATCGTAAGAGGAACCCTTGAGCGTGGGAACAGCCAAACACCAGCC
GGTGACATGTGGCATGTCTTGAACATCAACCGTCGTGTGGAAGCAGCGGA
AGCGGCTATCCAAGGAATGACCAATTTGATTGATAATATCAATACAGATT
TGTATGAAATGAGAAGTAATAACTCTTCTGATGTTATTCGTACACAATCA
CCCTCCTTCGGAAAGAATTTGAACGATATGTCAGATGGTGGTGAATGGGC
TCAAGCCATGACCAATATGATGAACGACCTTGATTCCAAAATGAGTGATT
TTAACGAACAAGTATCCAAGCTAGCTACCAAAGATCAAATTGAAGATTTC
CGTTCTGCCGATTACATTAATGATATGATTAAGGAGAAATTGGAAACTTT
GGATATCACTAAACGTGTTTCAAAAACTCACGCACCTGCTGGTCTAAGCG
CTGGTTCGGAGAAGGACTCTGGACTGGAAGATGCTCTTGTTAGTAAGGCT
GAGACTGGTATAAGTGTGACAGATGCGGTGAAATCGGTCTCATCTCTTAA
GAGGCGTGATTCGCGTGACTCACGGACACGCATTGCGTACCAAGAGGTAT
CAGCCAAGATGTTGTACCTTGAACAAGAGATCAATAAAGCGAAAGGTCAC
GTGAACTCCCTGGAGGTTATGCTTGGAGCAAAGATCGAGTTATCAGATAT
CGAGTCTAAATTGGATAAGACTGATttcTGGAAAGTTCGAGATGAACTCA
ATaaacaaattaagaacgcaCTCGACCAAATCTCCGCTCTGGAGAGCTCT
CATCGAACAGTGGGTGAAGAGGTCAGTGCACTGGTATCACAAACTGATGA
ATTCACCGTTCAACAACGTCACCTTGCCAAAGCCATGAAGAAATTAGAAC
GCGACTTGGAGGATATGACGGATAATTTCCATCGCTCACAAACTGATATG
GCACAGAAAAGATCTAATAATGGATTAGACGAAGCTGCTATTAACAAGAT
TCGTGGAAACATTTTTGATATCCAGGAACAACAGTCGAAATTCCAACAAA
ATTTGGATTCGTTAGAGCAAGACTCTAAGAATAAGGATAAATTTCTGGAG
AACATCAATATCGAAATTAAAGAGTTGCAGGAGGTGAAAGTGGACAAGGA
TTACGTTCAACAACAATTAGCTGGTAAGGTTGACCAAGGTTCAATCATCA
ATAAAGTTGAACGAGATCATTTTGATGCTTGCGTTCGAGATCTGGATGAA
AATAtccaaaatattcttcaaaagattGATGGAACTGAAGCCTTTACAAA
CCAGAAAATGACTACTTTGGAAGGTATCATTGGTACCAAAGTTGATCATG
ATGACCTCAAAGAGATTCATGCTTACATTGATCAACgattcaaaacattc
aaaccgAAAGTTCAACAAAAACAACGCGCTGAGGAAACAGCTGCTGGAAC
CAAGAAACAATTGATTAAGAATTGTAATTGTATTTCATGCGATAGACCTG
TTGAGATGACCACCGGTGGAGATGAAATTGTCACTCTACCGTACTACCAA
GCTTTACCAGGCGTCAAATCCATGCGACCAATCAATACCTTTGATTTGCA
AACATTACGTCAACATATGCACCAAACATTAACCCAGGGTAGCAACCGAC
AACGTTTTGAACTCTCACAAGAACGAAGCCGTCTACAAAAAGAATTACTT
CAATTATGCGGTGTGCGTGATTTGGACGAGTTTGCTGTTTCGGCCACTAA
CCGCGCTTGCGGTGGTGAACATACACTGATTGAACAAAATCGAAGAAACC
CCACTAAAAATCCCAATGGTGCTCGTGAAGATGGTTGCTATGGAGAACGA
CAGTTAGAAACAGAGGTCCGGGGACGAGATGGTCATATTTATAAAGGACG
TTTACAATCAGCACATTTACCGGACATCAGGTAAGCAGTATTTTACTAAT
TTTCGTTTTCTCCAAATTCGTatagttttcttcaaaatttggcACG
Run BLAST on NCBI

transcript from alignment at scaffold_361:575309..582247-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061997 ID=TCONS_00061997|Name=TCONS_00061997|organism=Clytia hemisphaerica|type=transcript|length=6939bp|location=Sequence derived from alignment at scaffold_361:575309..582247- (Clytia hemisphaerica)
AGTGGAAAGTAAGTGCATTTCCGAGTATTCTGTACCAGAGTGTATTTTTA
CGTTTATCGTTTCGTAGTACACTCTGTTCGCATTGTCTGCTTGATAAAAA
ATTCCCGTACTGCGATGAAGTTTGATTTATAAATAGCAAAACTTCTCACG
ACGTCTCCCCTCGCTGACCCGCACTCCATCAGAGAGGCCGGTTTGAAAAA
TCTCAAATCAGAAAAGACAATGACAACAGACTCTCTACGGCAATGAATTT
TGAAATTCGTGTACATGCTAATTTCCGAGGGACCTAACGGTGTTATTACG
ACAACTAAGCCAAAGTGTGTAAGTGATAGCAGTGATGGACTATTGAATCA
TATTTTTTTATTATTTTACAGGAATTTCCAATAAATCGGCTCGAGTTACC
CAAGAGCTTGACTTTCGACTTGCGCTGCAAGATGTGGCTGAAGAACATCG
TTCCCAAAGCCCCGTCCAACGGAAACTACCACCTTCATCACGCAAAACCG
CTCCTAACAACGCTACTTTAAGTGGCCATGCAATTGGATCGAAAGGCGAT
CACGCCGAACCCATTAACCAGGTTCAGCAACCGATCGCTCCAGGCGGACA
ACCCATGCTCTCCCAATCACCACCACCACCCTACAAGCCAAGCGAAAACG
ACTTTGATGGTCCATCTCAAAGTCAGCCCCATGGCCAAACTAATCCTCAA
GGTCAAGCCCAGTCTCAACCACAAGGCCAAGCCAACCCTCAACCACAAAG
CTACGACCAGCCTCAATCGCAAGGTCAAGCCCAACCTCAGCTGCAAGGTC
AAGGTCAAGGTCAGGCCCAGCCTAAGCCTCTAAGTGCACAAGGTCGACCG
ATACCAACCAGTAGCGTTACTCCTCCTCTAGAGGACCCACGTCCTTTGAG
TGGTCATGCCAATAACCAACAACAAAGACAACCGTCTATGACTGACGCAC
GAGCTGAAGCAGCCGAATCTTCAAGATCGAGACAGCACATTCCTGCTCCA
CCCAGTTCGCACAGCCGAAAAACATCTTTTCATAATTCTAGACGCAGTTC
ACTTATCAACCAACGGTTGTCATCTCTTAAGGGAAATCCTTCTTTCAATG
ACACCATCGTAAGAGGGTATGTATAATTATTCGATGACTAAATAAACGTC
TGTTTGAAAGCTATCAATGCCTTATACTTCATTGAAACATTCTAAAAATG
ACAATCGAAATTAGAAGTTTATCGTAAAAATGGAGACTTCTATTCAAAAA
TTTTAAACCGATAGCTTGAAAAGGAATTTTGATTTCTAAAATTCTCAATA
ACATATAAAGGCTGTTACGCTGTTCCAGTATTGATATTCTGTAATAAGTC
CTTGAAGTTTATATGAACTCTCAGTAACATTCCACATGATTTCATTTCAG
AACCCTTGAGCGTGGGAACAGCCAAACACCAGCCGGTGACATGTGGCATG
TCTTGAACATCAACCGTCGTGTGGAAGCAGCGGAAGCGGCTATCCAAGGA
ATGACCAATTTGATTGATAATATCAATACAGATTTGTATGAAATGAGAAG
TAATAACTCTTCTGATGTTATTCGTACACAATCACCCTCCTTCGGAAAGG
TAAGAATCATCCAATACCATAGATTTAGATATCGTGCTTTGGCTGGAAAG
TGTGCCGAGGTTAGGTAGGAAATCCTACCTACGTCACGTGACATTACAAT
AGAATTTCAGCGCTTGACCAATAAGAAGCTTCGCAGGTTTTCAAAAACAA
CAGTATTGCTGCTGTTGTTTTCGAAAACCCGCGAAGCTTCTTATTGGTCA
AGCGCTTTTTGCGATATTCACTTTTTTTGCTTGGAAGAGCAAAGCACCCT
TCGGGCTTGACAGAAATCTGTGTCCAATACATGATCGTATCAATCCGTCT
CTGTCGTCTTAGTTTCTTATTTTCCAACTCTGGAATTATAAGTACGAAAT
CCCAAACCTTCAGAGGGCCAAGTGAAAGTGAAGGTGTTAATGTTACACTT
CAGTTCAGTATCAAGCCAGTACAAATGAATAACTTTATTTAGATGAAAGT
CAATTGATTTAAATGTCAAACACATTCACCCAATATATCTACGCAAATGC
ATCCAAAATTAATGCCTGCCTTTAAATCCTTGGGAACCTACTTCCAAGTG
TATTTTATGATAAAAACAACAGTTAAAATACACTTTCATTTTGTACAGAA
TTTGAACGATATGTCAGATGGTGGTGAATGGGCTCAAGCCATGACCAATA
TGATGAACGACCTTGATTCCAAAATGAGTGATTTTAACGAACAAGTATCC
AAGCTAGCTACCAAAGATCAAATTGAAGATTTCCGTTCTGCCGATTACAT
TAATGATATGATTAAGGAGAAATTGGAAACTTTGGATATCACTAAACGTG
TTTCAAAAACTCACGCACCTGCTGGTCTAAGCGCTGGTTCGGAGAAGGAC
TCTGGACTGGAAGATGCTCTTGTTAGTAAGGCTGAGACTGGTATAAGTGT
GACAGATGCGGTGAAATCGGTCTCATCTCTTAAGAGGCGTGATTCGCGTG
ACTCACGGACACGCATTGCGTACCAAGAGGTATCAGCCAAGATGTTGTAC
CTTGAACAAGAGATCAATAAAGCGAAAGGTCACGTGAACTCCCTGGAGGT
TATGCTTGGAGCAAAGATCGAGTTATCAGATATCGAGTCTAAATTGGATA
AGACTGATGTAAGTCAATTTCTTATTAGTTCACAACCCGGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCTTAGGGAAAAATTGGTGCTGGGTATG
TGCGGGCGATAATAGTTGGCTTTCGGAGGTCCCGTCCATACATACTCTTC
ATCCGCCTACCCTAGTACCCACAATCTAGCTTTCTTAATTTACTGAATTC
CGCAAAATCAATACGCGGGTTCTTTCTATTTTCCAAGCTAAAGTTGCTTG
TCGTGATATTATCGGTTACAAGAGTCTTTCATTCATAAATCATTGTATTA
GATATATCTAGGTAGCTAGGATATAGAAAACTCTAGAAAAAAAGAGCTTA
CTAAAGGTCTTTCCAATTTTTAATTTTAGTTCTGGAAAGTTCGAGATGAA
CTCAATAAACAAATTAAGAACGCACTCGACCAAATCTCCGCTCTGGAGAG
CTCTCATCGAACAGTGGGTGAAGAGGTCAGTGCACTGGTATCACAAACTG
ATGAATTCACCGTTCAACAACGTCACCTTGCCAAAGCCATGAAGAAATTA
GAACGCGACTTGGAGGATATGACGGATAATTTCCATCGCTCACAAACTGA
TATGGCACAGAAAAGATCTAATAATGGATTAGACGAAGCTGCTATTAACA
AGATTCGTGGAAACATTTTTGATATCCAGGAACAACAGTCGAAATTCCAA
CAAAATTTGGATTCGTTAGAGCAAGACTCTAAGAATAAGGATAAATTTCT
GGAGAACATCAATATCGAAATTAAAGAGTTGCAGGTTAGTGAGACCCATG
CTTTGAATTCTCATTTTAAGGTTTATGATTGATAGCATTGTTTGTTTACT
TACCACGTTTCATAACACAACTTGGAACCAACGCCATACCACTTCTGTCT
CAGACCATAGAAAAACCTTGAATAACTAGATTTGAGCCACCAGAGACACT
ATATAGGGAGTAGATATTTGAGCAAAATCAATTTCTGAGTGTACCTTATC
GGGGAAAACTTCGTCGGGAAAAATTTTCGTCGGGGAAAAATATTCGTCAC
TTGCTGGTTTTGGTAAGCGCATTAAGGCCGGGGAAAATTTTCGTCGGGGA
AAAATATTCGTCACTTGCTGGTTTTGGTAAGCGCATTAAGGCCGGGGAAA
ATTTTCGTCGGGGAAAAATATTCGTCACTTGGCCGAAATTTCGTCACTTT
TCCCCGACGAAGTTTTCTCCGATAAGGTAGCTGATTACACCATAAAAAGT
CTAAGCCACCTTTCAATTTGTATGGTTAGTTCACTTTATCATTTCTCTGA
TACGATAGAATGGGTTTAAAATACCACCACCATCATTTATATCATTTCTA
GGAGGTGAAAGTGGACAAGGATTACGTTCAACAACAATTAGCTGGTAAGG
TTGACCAAGGTTCAATCATCAATAAAGTTGAACGAGATCATTTTGATGCT
TGCGTTCGAGATCTGGATGAAAATATCCAAAATATTCTTCAAAAGATTGA
TGGAACTGTAAGTTCAAGTTTTTTTTGAAAAATATCCGACACAAGCTTCT
TAATACACCTTTTGCCGCGCGGGCATTTTTTTGTCCGTTTTATCCCACTA
AAACTGTCCCAGTCCTTTCTTCGCACCTATAGACAATAGAAAAATATGTC
AAAAAAGGACTGGATCAAGTTTAGGGGGATAATTAAATAATTAAGTGGCA
AGCACCTGACCGCGCGACTACGGTCGAAACGGCGTAAAAAAATTCTATAA
AGAAAGGGTCAATCTAAATCTACGTCATAACCTTCAAGAATTTAAGGAAT
GGCTACAGAAATGCTGATTTTAACTTAAGACCCTTTAAAGCCAGAAGACT
TTTTATGAGAACATTCTAAGCCTAACAAACACGAAAAACAAGAACAGCAG
TCCCTCAGCCAAAGTCCATAAGTTCTCACAAGTATGTATAGTATGAAAGA
ATCCTTCTTATGCAAAGCCAAGGAAAATGTGAAATTTCAGTGACTGATTT
AGAGTGCTTCAAATTCAGCTCTTTAGAAGAATTAAGAAACAAAGAAGTAC
AAAACAAAATCTCTGATATACTTTTTTTCTCGAATATATAGGAAGCCTTT
ACAAACCAGAAAATGACTACTTTGGAAGGTATCATTGGTACCAAAGTTGA
TCATGATGACCTCAAAGAGATTCATGCTTACATTGATCAACGATTCAAAA
CATTCAAACCGAAAGTTCAACAAAAACAACGCGCTGAGGAAACAGCTGCT
GGAACCAAGAAACAATTGATTAAGAATTGTAATTGTATTTCATGCGATAG
ACCTGTTGAGATGACCACCGGTGGAGATGAAAGTAAGACAGATTTTTTTG
CTCGAATTTAAAATTCTATCAGTTCGACCTCGACTCCCGCTCTGGTAAAT
TAACATTCTTGAATGAGTACTCTTAGATGCCAAATAAACGGAGGGGGGAT
TGGAGAGATTGTACTTCTGAAAACCCCAAAAAAAGGTAAATATAGGCTAA
AATCTTTGCTTTTTGGAGCAAAATAAGGCGACTTCTTCTATAGACGAGGG
GGGGGGGTCCTAATAAGGTCCGGGGGTTGGAAAATTTGCGAAAAATTAAC
AAGCGGGGGGGGGGGGGTTTTTTTGGCACCTAAGAGTATGTCAAAAAAGG
GAAAACATAGCCTCGTCCGCGTAATGTAATTTTAAGAGCACTCGACGCAA
TCCAACGTTTACGAGGTTAATTTTGAAAAATTCGTCGCAATTTAAACCCA
TTATCAGGTTCAGTTGACTCTCTCTAATTCGATCTTCAAGGGACCAAGAA
TTTCTTCGAATTATAGAAAGATTCAGATTACGAAGGGATTTTATGCAATT
TTCCAGTTGAGTGGACTAATCTTTTCGTTCGAATCAAAAAAAAAGATTCG
AATAATGACTAAGGAGGCTCCAGTTAAAATCAAAGTCAAAACTAGCCGTA
GTTTTAGTATTACTATTTCAATCTCTTATTATTATCTAGTTGTCACTCTA
CCGTACTACCAAGCTTTACCAGGCGTCAAATCCATGCGACCAATCAATAC
CTTTGATTTGCAAACATTACGTCAACATATGCACCAAACATTAACCCAGG
GTAGCAACCGACAACGTTTTGAACTCTCACAAGAACGAAGCCGTCTACAA
AAAGAATTACTTCAATTATGGTAAGTGGACTAAATGTTAGCTCTTCTAAC
ATACCATAACCTCGTAACAATCATTTTTAGCTCCCCTGACATTAAAGCAT
AAGTTTTAATACAGTGAACTTCTATAATGATCATCGAGTAAACTGAACCA
CTATAATCCAAAAATTTTTTTTGAAAAGGTCTTTAAAAGAGTCTCTTTAA
GTATCCTACACCTTGGGATGGGTAGAACCCGACCTTACTTTATAATGGTT
TGATTGTTTAAAATAAAATGAAATCTTACACAAACTATCATCTAAATATG
GTGACCATACACAATATGGTGATATTCCATATTGGGCTTTTCCAGAAATA
GTCCGTGCCCCCCCCCTGTTGAGGATATCGGATATCCAGGGGGCTAACGA
TGTTTTTTTAAAAGTGGATATCCAAGGGGCTAAATATCTACAAGGGGGGA
TATAAAGTGTTGTTTTCAAGTAAAAAATACGATATCCAGGGGTAAGCATC
TTTATAAAAGAGGATATCCAGGGGGATTTTCATATTTTTAAGAGTTCGAT
ACTTCGAAAAATCAATATCCTCAACAGTAGGCGTAAATTTTTTTCTGGAA
AAGCCCATTCTCCGCGCAAGATAAAGGGTGTCACAAATATTAAATTCACA
ATGGATTGTCAGTTGCGAGATCAACACTGTAATATATCATTTTGCTTTCA
GCGGTGTGCGTGATTTGGACGAGTTTGCTGTTTCGGCCACTAACCGCGCT
TGCGGTGGTGAACATACACTGATTGAACAAAATCGAAGAAACCCCACTAA
AAATCCCAATGGTGCTCGTGAAGATGGTTGCTATGGAGAACGACAGTTAG
AAACAGAGGTCCGGGGACGAGATGGTCATATTTATAAAGGACGTTTACAA
TCAGCACATTTACCGGACATCAGGTAAGCAGTATTTTACTAATTTTCGTT
TTCTCCAAATTCGTATAGTTTTCTTCAAAATTTGGCACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038863XLOC_038863Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061997-exon-scaffold_361-1575043694:581132..582247TCONS_00061997-exon-scaffold_361-1575043694:581132..582247Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1575043694:580649..580847TCONS_00061997-exon-scaffold_361-1575043694:580649..580847Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1575043694:579540..580049TCONS_00061997-exon-scaffold_361-1575043694:579540..580049Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1575043694:578664..579068TCONS_00061997-exon-scaffold_361-1575043694:578664..579068Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1575043694:577941..578096TCONS_00061997-exon-scaffold_361-1575043694:577941..578096Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1575043694:577116..577356TCONS_00061997-exon-scaffold_361-1575043694:577116..577356Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1575043694:576278..576458TCONS_00061997-exon-scaffold_361-1575043694:576278..576458Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1575043694:575309..575596TCONS_00061997-exon-scaffold_361-1575043694:575309..575596Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1510915933:581132..582247TCONS_00061997-exon-scaffold_361-1510915933:581132..582247Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1510915933:580649..580847TCONS_00061997-exon-scaffold_361-1510915933:580649..580847Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1510915933:579540..580049TCONS_00061997-exon-scaffold_361-1510915933:579540..580049Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1510915933:578664..579068TCONS_00061997-exon-scaffold_361-1510915933:578664..579068Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1510915933:577941..578096TCONS_00061997-exon-scaffold_361-1510915933:577941..578096Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1510915933:577116..577356TCONS_00061997-exon-scaffold_361-1510915933:577116..577356Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1510915933:576278..576458TCONS_00061997-exon-scaffold_361-1510915933:576278..576458Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1510915933:575309..575596TCONS_00061997-exon-scaffold_361-1510915933:575309..575596Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1491911889:581132..582247TCONS_00061997-exon-scaffold_361-1491911889:581132..582247Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1491911889:580649..580847TCONS_00061997-exon-scaffold_361-1491911889:580649..580847Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1491911889:579540..580049TCONS_00061997-exon-scaffold_361-1491911889:579540..580049Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1491911889:578664..579068TCONS_00061997-exon-scaffold_361-1491911889:578664..579068Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1491911889:577941..578096TCONS_00061997-exon-scaffold_361-1491911889:577941..578096Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1491911889:577116..577356TCONS_00061997-exon-scaffold_361-1491911889:577116..577356Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1491911889:576278..576458TCONS_00061997-exon-scaffold_361-1491911889:576278..576458Clytia hemisphaericaexon
TCONS_00061997-exon-scaffold_361-1491911889:575309..575596TCONS_00061997-exon-scaffold_361-1491911889:575309..575596Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:575309..582247 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.172043	0	0.48699	0.421993	0.23201	0.144051	0.126393	0.236656	0.0931998	0.064135	0.062251	0.0982112	0.204322	0.186728	0.0628018	0.149769	0.138377	0.122921	0.104506	0.136698	0.130697	0.191248	0.112721	0.140909	1.96779	0.899631	0.134803	0.143865	0.0818376	0.194552
Blast
[Close]
BLAST of TCONS_00061997 vs. Swiss-Prot (Human)
Match: QRIC2 (Glutamine-rich protein 2 OS=Homo sapiens GN=QRICH2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.270e-29
Identity = 102/386 (26.42%), Postives = 182/386 (47.15%), Query Frame = 2 
Query: 2006 LEDMTDNFHRSQTDMAQKRSNNGLDEAAINKIRGNIFDIQEQQSKFQQNLDSLEQDSKNKDKFLENINIEIKELQEVKVDKDYVQQQLAGKVDQGSIINKVERDHFDACVRDLDENIQNILQKIDGTEAFTNQKMTTLEGIIGTKVDHDDLKEIHAYIDQRFKTFKPKVQQKQ---RAEETAAGTKKQLIKNCNCISCDRPVEMTTGGDEIVTLPYYQALPGVKSMRPINTFDLQTLRQHMHQTLTQGSNRQRFELSQ-------------------------------ERSRLQKELL--QLCG------VRDLDEFAVSATNRACGGEHTL-IEQNRRNPTKNPNG--AREDGCYGERQLETEVRGRDGHIYKGRLQSAHLPDI 3028
            L+DM ++   S+     K      DE  + +++  I  +Q    K      +L +D + K K +  +   +++L++ K ++++++ ++  K D+ ++  KV R  FDA    L+  +Q ++ K+ G E    + +  L   +  K+D  +L  +   ++ R+K+ + +++++    +A+E AA  ++QL+ + +C+SCDRP+E    G  I   P    LPG  S+RP   F+L+ +RQH  + L  GS   R +L+Q                                 S++ +ELL  Q  G      V D+ ++  S   R CGG HTL    +R  P   P G    E+     +  E ++ G DGHIYKGR+ +  LP I
Sbjct: 1234 LQDMVNSLAVSRPSKKAKLQRQ--DEELLGRVQSAILQVQGDCEKLNITTSNLIEDHRQKQKDIAMLYQGLEKLEKEKANREHLEMEIDVKADKSALATKVSRVQFDATTEQLNHMMQELVAKMSGQEQDWQKMLDRLLTEMDNKLDRLELDPVKQLLEDRWKSLRQQLRERPPLYQADEAAA-MRRQLLAHFHCLSCDRPLETPVTGHAIPVTPAGPGLPGHHSIRPYTVFELEQVRQH-SRNLKLGSAFPRGDLAQMEQSVGRLRSMHSKMLMNIEKVQIHFGGSTKASSQIIRELLHAQCLGSPCYKRVTDMADYTYSTVPRRCGGSHTLTYPYHRSRPQHLPRGLYPTEEIQIAMKHDEVDILGLDGHIYKGRMDT-RLPGI 1614
The following BLAST results are available for this feature:
BLAST of TCONS_00061997 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QRIC27.270e-2926.42Glutamine-rich protein 2 OS=Homo sapiens GN=QRICH2... [more]
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