TCONS_00062465 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062465
Unique NameTCONS_00062465
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3570

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062465 ID=TCONS_00062465|Name=TCONS_00062465|organism=Clytia hemisphaerica|type=transcript|length=3570bp
GTTTGATTCGAAAACTAATTTTCTGAAACCTCAGTCAAAATAGTATTTGT
GTAGAGGAGTGTCTTGTGTATTTTTTATGCAAGAGCACATGAAAAAGTCG
GATATTTGAAATAAAggtaaaaatttacaatttcataaatATATTATAGA
GTTACAATACCACTATAAACTGTGAACATATTAACTTTTGAGGAATCCTC
TTTGTGCTGGgcaaaaaatacaataatttTACTCAACATCGGGTAGTTTG
ATAAAGTCACATAATCATCAATCTGGTAATCTGGAGTGCAGCATTGACAT
GCAGCATGGTTGAACGGTTTTATGACGTCTGACATAGGGCATATGTTTAC
ACTAAAAGTTTTATAGTCATAATCATCACAAGGACAAAAATATTCTGCCC
AAGCCTTTAgttttcttgagaaaaaatcatcaataGTAATGGGGAAAACC
TTCAGCTTAATTTTACTGAAATCTGCAACTAAATGGTTAAACACGTGGCT
AGAGCAGTTTTTACTGTGCTTACCTCCCAAATGTTGAAACATAAAACAAG
TACAATAGCCATCTTCTTTTGAAATCTTTGTAGGTTCATTCATTTTTCTA
ATAATAGCTGCACCTGGAAAACAATCTTTCTGTATTGTAATGTTTTCATC
GACCAATTTTTGCTTCTCAATCTTTTGAAATGAGAAGTCTTcaccatcag
aatcatcatATATATTACTTCTCCAAACAACACTTTCTTTATCACGATCT
TTATAGCAGTCAAGATCTCCCTTATTGCATTCAACCTGATCATCTGGATA
AAAACCATCATCTTCAGAATAAGTTATGAGTTTGAAATCTCTAGCTCCTT
TCTCATAAAGTTCATCATGTGGTTCATCACGAGGAAGCTCATTTTTACAA
TATTCATAATAGCGATCATAGGAATTCAGCATATTCCTCACTTCCAGATC
CCTGACAGCTAGTGGTAAGTCTACAAAGAGGTTATCTCTATCGTCTCCAT
CTCCTGTTTCAGACAAAATTGTAATCTTTGATCTAAATTCAGATTGCATA
TCTATCCCAATATCATCTCGATCAAAGTACTTTGCCATGTAATTTCTATC
AACACTGTGATACAAATCTTTATTTggatctttttccttttttctttgcG
CAACTTTGAAGATGGTACCGTGGACAGGTTCCTCAGCAAATACACCATAA
AGAAGATCTCTTAACTGAACAGTTGTTGCACTCCTTGTTTCTCTATCATA
ATTCACCAAATAGTGTTTATCATTGGGTGCATTTCCGAGTAAACACATTG
AATACACTGCTGCAACTTTGGCAAATTCGTTCATATTGTTGTTAACAAAG
TTTACATTTTGAGATATTGAAAAATTTGTATAAACACCACTACTGTAAAT
AGTCTCAGGAACAACTCTATCAAAGAATAGCTTTTTCTTCTCAGACTTCA
AGAAGGGAAACACTTTACAGAGATTGTTCAAAGACTTGATGTCAACaata
tatttcattattttaagcCAAATCTCTTTCGAAAAAATGTTTGGTAAAGA
CAAATTTTCAATAGCCTCCATTGAATTATTATCCTTGTCAGGGGCTGCAA
CATCTGAAAAATCCCTATGTTGCCTGGGTAAGTTTTCCTCAAATTGTTCT
TCCTTAGGGTAATTATATCGAATAGACAAGCTCTTTTCATAGCAGTCATT
AGCTCTTGCTGTATTTTCAGCTAATTCACATTGCTGAGCTTCTCGAAATA
ATTGAAGACATTCAAAATAGTCTTGAAGCTCTGCCACAGGTGGAGAAAAT
CCAAGTTTGACAGGGCGCTCAACCATAATATCAGTTTTAATAATATATTT
ATAATTGGTACTTTCTGAATGTAAAGGGTAACCTTGATGCAGAATATTTT
GTTTGAAGATCAAACATGTACCTGTTTGTGGTTTAATGGAGATGTGGTCA
AATCCATGAAAAATATTACcatgaaattgaatttctttactGATTGTTTG
ACCTTTGGTATCAgttgaaatgttttttggaaaatgtaaaATTGTTTGAC
CTCCTTCAAAATCATCATTCAAATAGATAAGCATAGTATACAAAGATCTT
TTATCACCATTAGGACAGAATGGAGCATCTCTGTGCGGACCaaaaaattc
cttatttttcccACTGTATCTGTTTAAACGCATGGCTTGATTAATTCCAG
ATAATTTCCAATTGCCTCTTGAAGCATCAAAACCAAAAGGATGAACTGGA
TTATCTCCTAATTTATCTACAAATTGTTCTGACAAATTTTTCCAAAGAAA
GTCAGCAAAGTTCTCATCAAACAAAACTAGACGAGAATTATTTCTTTCTT
CGCCATAACAACATagttgaaaatttaatttctctgcctttgttattatt
tttttacactGACTTTTTGACAAAAGATTCTTGCAAGAAAATACACTAGG
GTGAATCTCATCCAATATCGTGTTATTGAAAACAGTGTTTCCAAGTTCAG
TGTTATCGAGGAATTGAAAGTGTTCTCCCCAATCAGTTGTACGTAAAGAT
GTTTCTGCTAGGAGGTACGGTTTGCCGATCATGTCAGGAAAAACATTGTT
GTGGTGTATACTTTTGATATTATTATacattattttaattactttctCCT
CCTAGAAAAGATTAATTCACTTTAATAAGAGTGAGAATCAGCTAACTTTT
GCCTTAACAAGCAACACACTGAATGGACATACCTGATGAAATCAAACCAT
GCTAAATTCTGGGTATAAACATAGAAAGTCCTTTCCACCCACCGCACCAT
GTATAGATAACTCAAGAaaatctaatgaagcaattttgacaaaagcccaa
aatttggccaaaatttgccaacatttttgaggattacaaaCAACTATGCA
TCATTCtgtaaaatatcagaaaaaaaattgagaagatTGTTACTAAAATC
CAAGAAATTTTCCACTAATCCTATTCATTCTTTTTTCGTTATCGGAATTA
AACATCCTGAACCTCCCACAGCTAAAAGTCATTGGAGAAGTGTACAAATG
ACAAAGATCAAAGGAATCCATCTCCCGGACCTCCCAAACCTCCCACAGCT
AAAAAGTCATTAGAGAAGTGTACAGAGATCAACGGGATCATCTCCCGGAC
CTCCCAAACCTCCCATAGCCAAAAAACCTCTGGAGAAGTGTACAGAGATC
AAAGGAATCCATCTCCCGGACCTCCCAAACCTCCCACAGCTAAAAAGTCA
CTAGAGAAGTGTACAAAGATTAAAACTTCTCTGTGTACACTTCTCTAATG
ACTACGACCCTcaacatggcccgagaattctcgggccaaaacttttattg
gaattcgcgtaaagcccgagagctggcccgagaattcgggctgtgttcgg
gccacacgcgggccacgcacgggccaatttttgaaaacatgatttaaaca
ggcgtgtaatttcagaactgaattttttttacattttctttgagaaaaac
ttggtttctcttaattatattttaaatatatgaatgttgtaaattcatat
atataaatattaaatgtctt
Run BLAST on NCBI

protein sequence of TCONS_00062465-protein

>TCONS_00062465-protein ID=TCONS_00062465-protein|Name=TCONS_00062465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=828bp
MYNNIKSIHHNNVFPDMIGKPYLLAETSLRTTDWGEHFQFLDNTELGNTV
FNNTILDEIHPSVFSCKNLLSKSQCKKIITKAEKLNFQLCCYGEERNNSR
LVLFDENFADFLWKNLSEQFVDKLGDNPVHPFGFDASRGNWKLSGINQAM
RLNRYSGKNKEFFGPHRDAPFCPNGDKRSLYTMLIYLNDDFEGGQTILHF
PKNISTDTKGQTISKEIQFHGNIFHGFDHISIKPQTGTCLIFKQNILHQG
YPLHSESTNYKYIIKTDIMVERPVKLGFSPPVAELQDYFECLQLFREAQQ
CELAENTARANDCYEKSLSIRYNYPKEEQFEENLPRQHRDFSDVAAPDKD
NNSMEAIENLSLPNIFSKEIWLKIMKYIVDIKSLNNLCKVFPFLKSEKKK
LFFDRVVPETIYSSGVYTNFSISQNVNFVNNNMNEFAKVAAVYSMCLLGN
APNDKHYLVNYDRETRSATTVQLRDLLYGVFAEEPVHGTIFKVAQRKKEK
DPNKDLYHSVDRNYMAKYFDRDDIGIDMQSEFRSKITILSETGDGDDRDN
LFVDLPLAVRDLEVRNMLNSYDRYYEYCKNELPRDEPHDELYEKGARDFK
LITYSEDDGFYPDDQVECNKGDLDCYKDRDKESVVWRSNIYDDSDGEDFS
FQKIEKQKLVDENITIQKDCFPGAAIIRKMNEPTKISKEDGYCTCFMFQH
LGGKHSKNCSSHVFNHLVADFSKIKLKVFPITIDDFFSRKLKAWAEYFCP
CDDYDYKTFSVNICPMSDVIKPFNHAACQCCTPDYQIDDYVTLSNYPMLS
KIIVFFAQHKEDSSKVNMFTVYSGIVTL
Run BLAST on NCBI

transcript from alignment at scaffold_364:356604..360173

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062465 ID=TCONS_00062465|Name=TCONS_00062465|organism=Clytia hemisphaerica|type=transcript|length=3570bp|location=Sequence derived from alignment at scaffold_364:356604..360173 (Clytia hemisphaerica)
aagacatttaatatttatatatatgaatttacaacattcatatatttaaa atataattaagagaaaccaagtttttctcaaagaaaatgtaaaaaaaatt cagttctgaaattacacgcctgtttaaatcatgttttcaaaaattggccc gtgcgtggcccgcgtgtggcccgaacacagcccgaattctcgggccagct ctcgggctttacgcgaattccaataaaagttttggcccgagaattctcgg gccatgttgAGGGTCGTAGTCATTAGAGAAGTGTACACAGAGAAGTTTTA ATCTTTGTACACTTCTCTAGTGACTTTTTAGCTGTGGGAGGTTTGGGAGG TCCGGGAGATGGATTCCTTTGATCTCTGTACACTTCTCCAGAGGTTTTTT GGCTATGGGAGGTTTGGGAGGTCCGGGAGATGATCCCGTTGATCTCTGTA CACTTCTCTAATGACTTTTTAGCTGTGGGAGGTTTGGGAGGTCCGGGAGA TGGATTCCTTTGATCTTTGTCATTTGTACACTTCTCCAATGACTTTTAGC TGTGGGAGGTTCAGGATGTTTAATTCCGATAACGAAAAAAGAATGAATAG GATTAGTGGAAAATTTCTTGGATTTTAGTAACAatcttctcaattttttt tctgatattttacaGAATGATGCATAGTTGtttgtaatcctcaaaaatgt tggcaaattttggccaaattttgggcttttgtcaaaattgcttcattaga tttTCTTGAGTTATCTATACATGGTGCGGTGGGTGGAAAGGACTTTCTAT GTTTATACCCAGAATTTAGCATGGTTTGATTTCATCAGGTATGTCCATTC AGTGTGTTGCTTGTTAAGGCAAAAGTTAGCTGATTCTCACTCTTATTAAA GTGAATTAATCTTTTCTAGGAGGagaaagtaattaaaataatgtATAATA ATATCAAAAGTATACACCACAACAATGTTTTTCCTGACATGATCGGCAAA CCGTACCTCCTAGCAGAAACATCTTTACGTACAACTGATTGGGGAGAACA CTTTCAATTCCTCGATAACACTGAACTTGGAAACACTGTTTTCAATAACA CGATATTGGATGAGATTCACCCTAGTGTATTTTCTTGCAAGAATCTTTTG TCAAAAAGTCagtgtaaaaaaataataacaaaggcagagaaattaaattt tcaactATGTTGTTATGGCGAAGAAAGAAATAATTCTCGTCTAGTTTTGT TTGATGAGAACTTTGCTGACTTTCTTTGGAAAAATTTGTCAGAACAATTT GTAGATAAATTAGGAGATAATCCAGTTCATCCTTTTGGTTTTGATGCTTC AAGAGGCAATTGGAAATTATCTGGAATTAATCAAGCCATGCGTTTAAACA GATACAGTgggaaaaataaggaattttttGGTCCGCACAGAGATGCTCCA TTCTGTCCTAATGGTGATAAAAGATCTTTGTATACTATGCTTATCTATTT GAATGATGATTTTGAAGGAGGTCAAACAATtttacattttccaaaaaaca tttcaacTGATACCAAAGGTCAAACAATCagtaaagaaattcaatttcat gGTAATATTTTTCATGGATTTGACCACATCTCCATTAAACCACAAACAGG TACATGTTTGATCTTCAAACAAAATATTCTGCATCAAGGTTACCCTTTAC ATTCAGAAAGTACCAATTATAAATATATTATTAAAACTGATATTATGGTT GAGCGCCCTGTCAAACTTGGATTTTCTCCACCTGTGGCAGAGCTTCAAGA CTATTTTGAATGTCTTCAATTATTTCGAGAAGCTCAGCAATGTGAATTAG CTGAAAATACAGCAAGAGCTAATGACTGCTATGAAAAGAGCTTGTCTATT CGATATAATTACCCTAAGGAAGAACAATTTGAGGAAAACTTACCCAGGCA ACATAGGGATTTTTCAGATGTTGCAGCCCCTGACAAGGATAATAATTCAA TGGAGGCTATTGAAAATTTGTCTTTACCAAACATTTTTTCGAAAGAGATT TGgcttaaaataatgaaatatattGTTGACATCAAGTCTTTGAACAATCT CTGTAAAGTGTTTCCCTTCTTGAAGTCTGAGAAGAAAAAGCTATTCTTTG ATAGAGTTGTTCCTGAGACTATTTACAGTAGTGGTGTTTATACAAATTTT TCAATATCTCAAAATGTAAACTTTGTTAACAACAATATGAACGAATTTGC CAAAGTTGCAGCAGTGTATTCAATGTGTTTACTCGGAAATGCACCCAATG ATAAACACTATTTGGTGAATTATGATAGAGAAACAAGGAGTGCAACAACT GTTCAGTTAAGAGATCTTCTTTATGGTGTATTTGCTGAGGAACCTGTCCA CGGTACCATCTTCAAAGTTGCgcaaagaaaaaaggaaaaagatccAAATA AAGATTTGTATCACAGTGTTGATAGAAATTACATGGCAAAGTACTTTGAT CGAGATGATATTGGGATAGATATGCAATCTGAATTTAGATCAAAGATTAC AATTTTGTCTGAAACAGGAGATGGAGACGATAGAGATAACCTCTTTGTAG ACTTACCACTAGCTGTCAGGGATCTGGAAGTGAGGAATATGCTGAATTCC TATGATCGCTATTATGAATATTGTAAAAATGAGCTTCCTCGTGATGAACC ACATGATGAACTTTATGAGAAAGGAGCTAGAGATTTCAAACTCATAACTT ATTCTGAAGATGATGGTTTTTATCCAGATGATCAGGTTGAATGCAATAAG GGAGATCTTGACTGCTATAAAGATCGTGATAAAGAAAGTGTTGTTTGGAG AAGTAATATATatgatgattctgatggtgAAGACTTCTCATTTCAAAAGA TTGAGAAGCAAAAATTGGTCGATGAAAACATTACAATACAGAAAGATTGT TTTCCAGGTGCAGCTATTATTAGAAAAATGAATGAACCTACAAAGATTTC AAAAGAAGATGGCTATTGTACTTGTTTTATGTTTCAACATTTGGGAGGTA AGCACAGTAAAAACTGCTCTAGCCACGTGTTTAACCATTTAGTTGCAGAT TTCAGTAAAATTAAGCTGAAGGTTTTCCCCATTACtattgatgatttttt ctcaagaaaacTAAAGGCTTGGGCAGAATATTTTTGTCCTTGTGATGATT ATGACTATAAAACTTTTAGTGTAAACATATGCCCTATGTCAGACGTCATA AAACCGTTCAACCATGCTGCATGTCAATGCTGCACTCCAGATTACCAGAT TGATGATTATGTGACTTTATCAAACTACCCGATGTTGAGTAaaattattg tattttttgcCCAGCACAAAGAGGATTCCTCAAAAGTTAATATGTTCACA GTTTATAGTGGTATTGTAACTCTATAATATatttatgaaattgtaaattt ttaccTTTATTTCAAATATCCGACTTTTTCATGTGCTCTTGCATAAAAAA TACACAAGACACTCCTCTACACAAATACTATTTTGACTGAGGTTTCAGAA AATTAGTTTTCGAATCAAAC

Coding sequence (CDS) from alignment at scaffold_364:356604..360173

>TCONS_00062465 ID=TCONS_00062465|Name=TCONS_00062465|organism=Clytia hemisphaerica|type=CDS|length=2487bp|location=Sequence derived from alignment at scaffold_364:356604..360173 (Clytia hemisphaerica)
atgtATAATAATATCAAAAGTATACACCACAACAATGTTTTTCCTGACAT
GATCGGCAAACCGTACCTCCTAGCAGAAACATCTTTACGTACAACTGATT
GGGGAGAACACTTTCAATTCCTCGATAACACTGAACTTGGAAACACTGTT
TTCAATAACACGATATTGGATGAGATTCACCCTAGTGTATTTTCTTGCAA
GAATCTTTTGTCAAAAAGTCagtgtaaaaaaataataacaaaggcagaga
aattaaattttcaactATGTTGTTATGGCGAAGAAAGAAATAATTCTCGT
CTAGTTTTGTTTGATGAGAACTTTGCTGACTTTCTTTGGAAAAATTTGTC
AGAACAATTTGTAGATAAATTAGGAGATAATCCAGTTCATCCTTTTGGTT
TTGATGCTTCAAGAGGCAATTGGAAATTATCTGGAATTAATCAAGCCATG
CGTTTAAACAGATACAGTgggaaaaataaggaattttttGGTCCGCACAG
AGATGCTCCATTCTGTCCTAATGGTGATAAAAGATCTTTGTATACTATGC
TTATCTATTTGAATGATGATTTTGAAGGAGGTCAAACAATtttacatttt
ccaaaaaacatttcaacTGATACCAAAGGTCAAACAATCagtaaagaaat
tcaatttcatgGTAATATTTTTCATGGATTTGACCACATCTCCATTAAAC
CACAAACAGGTACATGTTTGATCTTCAAACAAAATATTCTGCATCAAGGT
TACCCTTTACATTCAGAAAGTACCAATTATAAATATATTATTAAAACTGA
TATTATGGTTGAGCGCCCTGTCAAACTTGGATTTTCTCCACCTGTGGCAG
AGCTTCAAGACTATTTTGAATGTCTTCAATTATTTCGAGAAGCTCAGCAA
TGTGAATTAGCTGAAAATACAGCAAGAGCTAATGACTGCTATGAAAAGAG
CTTGTCTATTCGATATAATTACCCTAAGGAAGAACAATTTGAGGAAAACT
TACCCAGGCAACATAGGGATTTTTCAGATGTTGCAGCCCCTGACAAGGAT
AATAATTCAATGGAGGCTATTGAAAATTTGTCTTTACCAAACATTTTTTC
GAAAGAGATTTGgcttaaaataatgaaatatattGTTGACATCAAGTCTT
TGAACAATCTCTGTAAAGTGTTTCCCTTCTTGAAGTCTGAGAAGAAAAAG
CTATTCTTTGATAGAGTTGTTCCTGAGACTATTTACAGTAGTGGTGTTTA
TACAAATTTTTCAATATCTCAAAATGTAAACTTTGTTAACAACAATATGA
ACGAATTTGCCAAAGTTGCAGCAGTGTATTCAATGTGTTTACTCGGAAAT
GCACCCAATGATAAACACTATTTGGTGAATTATGATAGAGAAACAAGGAG
TGCAACAACTGTTCAGTTAAGAGATCTTCTTTATGGTGTATTTGCTGAGG
AACCTGTCCACGGTACCATCTTCAAAGTTGCgcaaagaaaaaaggaaaaa
gatccAAATAAAGATTTGTATCACAGTGTTGATAGAAATTACATGGCAAA
GTACTTTGATCGAGATGATATTGGGATAGATATGCAATCTGAATTTAGAT
CAAAGATTACAATTTTGTCTGAAACAGGAGATGGAGACGATAGAGATAAC
CTCTTTGTAGACTTACCACTAGCTGTCAGGGATCTGGAAGTGAGGAATAT
GCTGAATTCCTATGATCGCTATTATGAATATTGTAAAAATGAGCTTCCTC
GTGATGAACCACATGATGAACTTTATGAGAAAGGAGCTAGAGATTTCAAA
CTCATAACTTATTCTGAAGATGATGGTTTTTATCCAGATGATCAGGTTGA
ATGCAATAAGGGAGATCTTGACTGCTATAAAGATCGTGATAAAGAAAGTG
TTGTTTGGAGAAGTAATATATatgatgattctgatggtgAAGACTTCTCA
TTTCAAAAGATTGAGAAGCAAAAATTGGTCGATGAAAACATTACAATACA
GAAAGATTGTTTTCCAGGTGCAGCTATTATTAGAAAAATGAATGAACCTA
CAAAGATTTCAAAAGAAGATGGCTATTGTACTTGTTTTATGTTTCAACAT
TTGGGAGGTAAGCACAGTAAAAACTGCTCTAGCCACGTGTTTAACCATTT
AGTTGCAGATTTCAGTAAAATTAAGCTGAAGGTTTTCCCCATTACtattg
atgattttttctcaagaaaacTAAAGGCTTGGGCAGAATATTTTTGTCCT
TGTGATGATTATGACTATAAAACTTTTAGTGTAAACATATGCCCTATGTC
AGACGTCATAAAACCGTTCAACCATGCTGCATGTCAATGCTGCACTCCAG
ATTACCAGATTGATGATTATGTGACTTTATCAAACTACCCGATGTTGAGT
AaaattattgtattttttgcCCAGCACAAAGAGGATTCCTCAAAAGTTAA
TATGTTCACAGTTTATAGTGGTATTGTAACTCTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039132XLOC_039132Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062465-proteinTCONS_00062465-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062465-exon-scaffold_364-1491911889:356604..360173TCONS_00062465-exon-scaffold_364-1491911889:356604..360173Clytia hemisphaericaexon
TCONS_00062465-exon-scaffold_364-1510915933:356604..360173TCONS_00062465-exon-scaffold_364-1510915933:356604..360173Clytia hemisphaericaexon
TCONS_00062465-exon-scaffold_364-1575043694:356604..360173TCONS_00062465-exon-scaffold_364-1575043694:356604..360173Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:356604..360173 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.0249 10.4727 4.37578 3.95482 9.91616 6.68863 9.49481 10.7368 5.29103 5.49263 7.50773 4.35514 5.92908 5.27219 4.45388 5.64984 6.52372 6.78252 3.54326 4.62169 7.43605 8.09103 18.2949 17.7671 3.53984 3.9374 5.51992 4.24959 11.7914 12.1959
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006620Pro_4_hyd_alph
IPR005123Oxoglu/Fe-dep_dioxygenase
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0031418L-ascorbic acid binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0005506 iron ion binding
molecular_function GO:0031418 L-ascorbic acid binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062465 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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