TCONS_00063826 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063826
Unique NameTCONS_00063826
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063826 ID=TCONS_00063826|Name=TCONS_00063826|organism=Clytia hemisphaerica|type=transcript|length=1158bp
TTctcaaaaaatctacaaaataacAATTATGGTATATAAAACCCATATCA
CTGTATTTCACGGATTATAAACGAACCCAGTCCATCATATTCAAGTCAAA
GCTCGAAAATGGACCATTACAGTAAAATCAGAAAGTGCTGtccaattttt
acattttaagtgAACCCGTGCTGAAATTCTGCATTCTAatgaattttatt
cttcttCATTCTTTGACAGCCGATCGATGTTATGGACAGACCTAGTGTTT
ATCATGCCACCGTCGTCATCTTCCTTGAATTCTTCGCTTGGGGATTGTTA
ACATCACCTTCAATTACCGTCTTAAAAGAAACCTTTCCAGAAAACACTTT
CCTGATGAATGGTATCATCCAAGGAATAAAGGGTTTCCTCTCTTTCCTGC
CGGCCCCATTGATCGGTGCCTTATCAGATGTTTGGGGACGAAAATCATTT
TTACTATTGACTGTTTTCTTCACATGTGTTCCCATACCATTGTTGAGACT
CAACCCATGgTGGTTCTTCGCATGTTTATCACCTTTTCCATCGTTTTTGC
TTACGTAGCTGACTGTACGGATAAATCAGACAGAAGTCACGCTTATGGAC
TGGTTTCAGCTACATTTGCTGCAAGTCTCATCACAAGCCCAGCATTGGGT
GCTTACCTTGGTTCCGTATATTCCGATTCTGTGGTGGTCGCCTTGGCAAC
AGCTATCGCTCTACTGGATATGTTATTCATCTTGGTTTGTGTTCCTGAAT
CTCTTCCTGAAAGATTGAGACCAGTATCGTGGGGCAAGTCCATTCCGTGG
GAAAAAGCTGACCCCTTCAGTctcaATGTTGCATGTATAAAAGGTCAAGA
GGCCGCCAATGAGCAAATCATTTCCAGCCATTTCATTCAAAGATCAAGAT
GGGAAACAGCAACAGCACATCAACTATCGCTGAAGcaaCAATCAAAACCT
TCCGGCTCAAAGTTCGAAATGACACCAGCTTGGTAGCCGATGTGTTGGTG
AAAGCTCATGATAGCCTGGAGAAGACtaacttaaaaagaaagcgaATTCC
TCCAAAGACGATTGTTTCGTTGCGTATGCCGACAACATTCCAAGACCTGG
TGGTGTCGGCTGCAACAAGGGAAAGGCGAGACCGGATGCTAGTGAACGGC
GAGGAGNN
Run BLAST on NCBI

protein sequence of TCONS_00063826-protein

>TCONS_00063826-protein ID=TCONS_00063826-protein|Name=TCONS_00063826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MCSHTIVETQPMVVLRMFITFSIVFAYVADCTDKSDRSHAYGLVSATFAA
SLITSPALGAYLGSVYSDSVVVALATAIALLDMLFILVCVPESLPERLRP
VSWGKSIPWEKADPFSLNVACIKGQEAANEQIISSHFIQRSRWETATAHQ
LSLKQQSKPSGSKFEMTPAW
Run BLAST on NCBI

transcript from alignment at scaffold_402:15568..20128-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063826 ID=TCONS_00063826|Name=TCONS_00063826|organism=Clytia hemisphaerica|type=transcript|length=4561bp|location=Sequence derived from alignment at scaffold_402:15568..20128- (Clytia hemisphaerica)
TTCTCAAAAAATCTACAAAATAACAATTATGGTATATAAAACCCATATCA
CTGTATTTCACGGATTATAAACGAACCCAGTCCATCATATTCAAGTCAAA
GCTCGAAAATGGACCATTACAGTAAAATCAGAAAGTGCTGTCCAATTTTT
ACATTTTAAGTGAACCCGTGCTGAAATTCTGCATTCTAATGAATTTTATT
CTTCTTCATTCTTTGACAGCCGATCGATGTTATGGACAGACCTAGTGTTT
ATCATGCCACCGTCGTCATCTTCCTTGAATTCTTCGCTTGGGGATTGTTA
ACATCACCTTCAATTACCGTAAGTTGATTTTGTTAATGAAAATTCGGTAA
ACCTTTTGTCAGAAGTTGAATTAGTTGTTATTTTATGTAGATATTTTACG
ACAGTCTTTCGATTGTGGTGAGCCGCCACCAGCCGGCTTGGCTATCTATG
AACTGAACGGGACATTGGAAGGTGTGGGGGATTCGAACTAGGAACCCCTG
GTTTCGGACACTGAGGCCTTAACCACTCGGCCATGGCTGCTTTGAAACAG
ACAATTTTTCATAGGTCTTAAAAGAAACCTTTCCAGAAAACACTTTCCTG
ATGAATGGTATCATCCAAGGAATAAAGGTATGTCCACACCATCATCATTA
CATCACAGATGGATTAAATTTCACGGTTTTAACGTATTTTGTCGTTGTTC
GGGAAAATTTGTTCTCCCGAAAAATTTATATTCCAAAATTGACTAAAACC
CATATATGGAAATGAAAAGAAATTGGGTGAAAAAGAGGCCGATTTGCGAA
ATTTTGTTGATGCGCAATATTTAGTTTCGCGATTCGAGAAAAAAAAGTTC
ACGCGAACTCAACTTAAGGTATTTATATAAAGTGGAGTCTCTTTAACTCT
AACCTCTATAACTCGAATGACTCTTTAACTCGAACAAGTTCTATGTACCC
TTTAGTTGCCTTATGAACATTACTCAATAACTCGAACAAAATTGCGCGTT
TGAATTATGGCGACACCTTTGTAATAGCTTAAAATGTAGTTTTTCGTCAT
TTTAATGTGTGTCACGAGAAGATTGGCAACAAAGCATGTTTCCAACGATC
GCTGTCCGTGAATTTCATGATATTCATGACGTAATGTTTTCTACGGAAAT
GCCCCGGTTTTTGCCAGTAGTGGCCAATTTTAAACAACTTTTGTCTAGTT
TGAATTTTGCACTACTGGCTAAAACCGGGGCATTTCCGTAGAAAAAATTA
CGTCATGAATATCATGGGTATGAACATTTCTCTGTGGTTTTAGAAAGCTT
ATCTGAAAGTGTGATATCTAATTTTTTTTTTAAACCCTGTCTCACAGTCC
AGGTGAAGATTTCCCACTGCTTACAGATAAACTTTTCTATTGAAATCACA
ATGGGGATATAAATTCTACTGTTACCAGCTCAAACAACCAAGTAGGGAAG
GTTTTGAACTGCAACTTTTCCCATTAAATTTCAAATGATGAAATCAAAAT
CAACCTGCCAGTGGGGATAAAATTGTAGGGTATTTTTCTCACGGGGGAAG
AGATTTTGGCCGAATTTTCCAGTCCACCGGGTCTGTGACACAGGCTTATC
TTAAAAGAGCTTTTCGAAATAACATATAGCCTGTCCCAGTCGGGTGCGCA
TTTTTCTCGACACCAGAAGCGACATCAAGAAACCACGTGATTGAATAGTA
GGTCAAATAACATGATAATTTAATAAGTTTAGGTTTTGAACTGCAACTTT
TTTCCATTAAATTTCAAATGATGAAATCAAAATCAACCTGCCAGTGGGGA
TATCAAGAAACCGCTTGAAGGAATAGGGTCAAAGAACATGATGATAATAT
GATTTTATGTTTTTTTTAGGGTTTCCTCTCTTTCCTGCCGGCCCCATTGA
TCGGTGCCTTATCAGATGTTTGGGGACGAAAATCATTTTTACTATTGACT
GTTTTCTTCACATGTGTTCCCATACCATTGTTGAGACTCAACCCATGGTG
AGACTTTCAAAGATTAAATCAAAACCTTTGTAATCCCGGACAAAAGGTTG
TAGACTTTTCAAAATTGAAAAAGAAATTCTCTGAAATGGCCAAAATTCCT
CTCCCCATCCCTTCAATGTTGTTGGGATCGTCCCACGACATCACCACAAC
GTACACCAAAACAACATTGAAGGGAACGGATTTTTCTAAAAGTCTACAAA
CTTTTTGTCCGGGATTGTGGCGAGGTTCGACATATTTGCCAGAGATGTGT
CGGCATATAAAGTAGATTCTCTCTTATTCGAACTTCTATTATTCGAATCT
TTCTGTAATTCGAATCTTTCTGTAATTCGAATCAATCTGTAATTCGAATC
TTTCTGTAATTCGAATCTTTCTATTATTCGAATCTTTCTGTAATTCGAAC
TTATTCTCAATCCTAGTCAAGAAGCAACCCTCTTAAAATACTTTTTGGAC
CTACCGTTCGTTCGTTCGTCTGTTACCAGCTTTTCTCGGGATTGGCTCAT
TAGCTTTTTCAGATTTTTTGCATAGTGATGCAAAATGGTGATTCCCAAAA
AATGACGGAGCCTGATTTTCGAAAAAGAAATTTTTTGGGCAAATTTGGGC
CGAAAAGTGCCTAAGAATAGTGTTTTTTGGACTTTTCGAATAAGCGAGAG
TTAACTGTATTGACATGAGTGACCACAATCCAAACAGTGTCATACAGTGT
TATTTTTAGCCAAATCTATCATTTATAATTCGTTAATTCTTGACAATCTA
TTTTTGTTTATTTTTGCAGGTGGTTCTTCGCATGTTTATCACCTTTTCCA
TCGTTTTTGCTTACGTAGCTGACTGTACGGATAAATCAGACAGAAGTCAC
GCTTATGGACTGGTGAGCTACACGCTTTTTTTATATAAGAAAACGAGGCT
GAAAAACGGCCAAAACCTAAGAACAAATTAAGAACAATCGTAAGCCTCAG
ATTTCAGAAATTACTTAGAAAGTACTGATTTTAACAGGTTTTAAACTCAT
TTCAAGTTTTTAAGTAAAGAAACTTAAGCGTATTAAGAACATCGTGAGAA
TATTAAGCCTGAATGATTGAAAAAATTAAGAACAACCCAGCGTGAGCCAA
AATTTACTCGTTCTATTGTTACATTATGCGGATGTAAGCAAAAAATGTTT
TTCCTTTCCTCTTTCTGACCTATCTTGCTCCACATCCGTGTCAATCCAAT
GTACAAAAAGCTTGTGAATTAAAATTGACGAGTAAGCAAACAATATCTCT
CTTATTTAAAAACAAAACCTTTAAGAAAGTAATCTTTCTTTTTATTCTCG
ACTTCAGGTTTCAGCTACATTTGCTGCAAGTCTCATCACAAGCCCAGCAT
TGGGTGCTTACCTTGGTTCCGTATATTCCGATTCTGTGGTGGTCGCCTTG
GCAACAGCTATCGCTCTACTGGATATGTTATTCATCTTGGTTTGTGTTCC
TGAATCTCTTCCTGAAAGATTGAGACCAGTATCGTGGGGCAAGTCCATTC
CGTGGGAAAAAGCTGACCCCTTCAGTGTAAGTTTTTTTCTTGATTTCAGT
TGTTTTTTTATAAGAAGTAAAAATTTTTTTTACAGTTTTTCACTTTTTTA
ATTACTTTCTTAAAATCTCGCTGAAAAGACTCACTATGAGACACGTACGC
ATTTTTTCTATTTTTCACTCGCATTTATCCACTATGTCAAAATTAGATAC
TGGCTAGGATTGAACTTTCGAGCCTTCGTCACGTGCTATATTCCTAGATA
ACAACTTTTTGACCAAAACGTTTTTGAAAGTCACGTTTACTATATTCTCA
AAAATGAGTGTCAGGTGTACATTTATTTTCTTATATTTTCATTCATCCGC
AATGTCAAAATACACTACCGAACGTTCGAATTTTCAACTGCTGGCTTTAA
AGCAAGAGCACAAAAAAAACACGTTCGAAAGCTTTTAGTAACTGTCAATC
ACAAAACCAAGTGTCACGTTCAATTTTCTTCATTGTTCATTCAAATAATG
TTGCATTTTTCTTTTTAGCTCAATGTTGCATGTATAAAAGGTCAAGAGGC
CGCCAATGAGCAAATCATTTCCAGCCATTTCATTCAAAGATCAAGATGGG
AAACAGCAACAGCACATCAACTATCGCTGAAGGTAATATTTCTTTTAAAA
TTCAGTTTTGTAATTATCTTGGCGCTGATTTTCTCCCTTACGATTTTTTA
GAGAAATAATTTTTCTGAAATTGTAAGAACTGGACTATTTTTGTATCGAT
AGAATGCTTAAATTTCACTGAGTTGATTTCTTAAGCCGGACATTAACGTA
ATTTCAAAATAATTGCTTTTATTTCTTCTTTTTTTCAGCAACAATCAAAA
CCTTCCGGCTCAAAGTTCGAAATGACACCAGCTTGGTAGCCGATGTGTTG
GTGAAAGCTCATGATAGCCTGGAGAAGACTAACTTAAAAAGAAAGCGAAT
TCCTCCAAAGACGATTGTTTCGTTGCGTATGCCGACAACATTCCAAGACC
TGGTGGTGTCGGCTGCAACAAGGGAAAGGCGAGACCGGATGCTAGTGAAC
GGCGAGGAGNN

Coding sequence (CDS) from alignment at scaffold_402:15568..20128-

>TCONS_00063826 ID=TCONS_00063826|Name=TCONS_00063826|organism=Clytia hemisphaerica|type=CDS|length=2565bp|location=Sequence derived from alignment at scaffold_402:15568..20128- (Clytia hemisphaerica)
CAACAATCAAAACCTTCCGGCTCAAAGTTCGAAATGACACCAGCTTGGTA
GCTCAATGTTGCATGTATAAAAGGTCAAGAGGCCGCCAATGAGCAAATCA
TTTCCAGCCATTTCATTCAAAGATCAAGATGGGAAACAGCAACAGCACAT
CAACTATCGCTGAAGGTTTCAGCTACATTTGCTGCAAGTCTCATCACAAG
CCCAGCATTGGGTGCTTACCTTGGTTCCGTATATTCCGATTCTGTGGTGG
TCGCCTTGGCAACAGCTATCGCTCTACTGGATATGTTATTCATCTTGGTT
TGTGTTCCTGAATCTCTTCCTGAAAGATTGAGACCAGTATCGTGGGGCAA
GTCCATTCCGTGGGAAAAAGCTGACCCCTTCAGTGTGGTTCTTCGCATGT
TTATCACCTTTTCCATCGTTTTTGCTTACGTAGCTGACTGTACGGATAAA
TCAGACAGAAGTCACGCTTATGGACTGATGTGTTCCCATACCATTGTTGA
GACTCAACCCATGCAACAATCAAAACCTTCCGGCTCAAAGTTCGAAATGA
CACCAGCTTGGTAGCTCAATGTTGCATGTATAAAAGGTCAAGAGGCCGCC
AATGAGCAAATCATTTCCAGCCATTTCATTCAAAGATCAAGATGGGAAAC
AGCAACAGCACATCAACTATCGCTGAAGGTTTCAGCTACATTTGCTGCAA
GTCTCATCACAAGCCCAGCATTGGGTGCTTACCTTGGTTCCGTATATTCC
GATTCTGTGGTGGTCGCCTTGGCAACAGCTATCGCTCTACTGGATATGTT
ATTCATCTTGGTTTGTGTTCCTGAATCTCTTCCTGAAAGATTGAGACCAG
TATCGTGGGGCAAGTCCATTCCGTGGGAAAAAGCTGACCCCTTCAGTGTG
GTTCTTCGCATGTTTATCACCTTTTCCATCGTTTTTGCTTACGTAGCTGA
CTGTACGGATAAATCAGACAGAAGTCACGCTTATGGACTGATGTGTTCCC
ATACCATTGTTGAGACTCAACCCATGCAACAATCAAAACCTTCCGGCTCA
AAGTTCGAAATGACACCAGCTTGGTAGCTCAATGTTGCATGTATAAAAGG
TCAAGAGGCCGCCAATGAGCAAATCATTTCCAGCCATTTCATTCAAAGAT
CAAGATGGGAAACAGCAACAGCACATCAACTATCGCTGAAGGTTTCAGCT
ACATTTGCTGCAAGTCTCATCACAAGCCCAGCATTGGGTGCTTACCTTGG
TTCCGTATATTCCGATTCTGTGGTGGTCGCCTTGGCAACAGCTATCGCTC
TACTGGATATGTTATTCATCTTGGTTTGTGTTCCTGAATCTCTTCCTGAA
AGATTGAGACCAGTATCGTGGGGCAAGTCCATTCCGTGGGAAAAAGCTGA
CCCCTTCAGTGTGGTTCTTCGCATGTTTATCACCTTTTCCATCGTTTTTG
CTTACGTAGCTGACTGTACGGATAAATCAGACAGAAGTCACGCTTATGGA
CTGATGTGTTCCCATACCATTGTTGAGACTCAACCCATGCAACAATCAAA
ACCTTCCGGCTCAAAGTTCGAAATGACACCAGCTTGGTAGCTCAATGTTG
CATGTATAAAAGGTCAAGAGGCCGCCAATGAGCAAATCATTTCCAGCCAT
TTCATTCAAAGATCAAGATGGGAAACAGCAACAGCACATCAACTATCGCT
GAAGGTTTCAGCTACATTTGCTGCAAGTCTCATCACAAGCCCAGCATTGG
GTGCTTACCTTGGTTCCGTATATTCCGATTCTGTGGTGGTCGCCTTGGCA
ACAGCTATCGCTCTACTGGATATGTTATTCATCTTGGTTTGTGTTCCTGA
ATCTCTTCCTGAAAGATTGAGACCAGTATCGTGGGGCAAGTCCATTCCGT
GGGAAAAAGCTGACCCCTTCAGTGTGGTTCTTCGCATGTTTATCACCTTT
TCCATCGTTTTTGCTTACGTAGCTGACTGTACGGATAAATCAGACAGAAG
TCACGCTTATGGACTGATGTGTTCCCATACCATTGTTGAGACTCAACCCA
TGCAACAATCAAAACCTTCCGGCTCAAAGTTCGAAATGACACCAGCTTGG
TAGCTCAATGTTGCATGTATAAAAGGTCAAGAGGCCGCCAATGAGCAAAT
CATTTCCAGCCATTTCATTCAAAGATCAAGATGGGAAACAGCAACAGCAC
ATCAACTATCGCTGAAGGTTTCAGCTACATTTGCTGCAAGTCTCATCACA
AGCCCAGCATTGGGTGCTTACCTTGGTTCCGTATATTCCGATTCTGTGGT
GGTCGCCTTGGCAACAGCTATCGCTCTACTGGATATGTTATTCATCTTGG
TTTGTGTTCCTGAATCTCTTCCTGAAAGATTGAGACCAGTATCGTGGGGC
AAGTCCATTCCGTGGGAAAAAGCTGACCCCTTCAGTGTGGTTCTTCGCAT
GTTTATCACCTTTTCCATCGTTTTTGCTTACGTAGCTGACTGTACGGATA
AATCAGACAGAAGTCACGCTTATGGACTGATGTGTTCCCATACCATTGTT
GAGACTCAACCCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040017XLOC_040017Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063826-exon-scaffold_402-1575043694:19811..20128TCONS_00063826-exon-scaffold_402-1575043694:19811..20128Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1575043694:19502..19564TCONS_00063826-exon-scaffold_402-1575043694:19502..19564Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1575043694:18132..18259TCONS_00063826-exon-scaffold_402-1575043694:18132..18259Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1575043694:17267..17359TCONS_00063826-exon-scaffold_402-1575043694:17267..17359Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1575043694:16603..16821TCONS_00063826-exon-scaffold_402-1575043694:16603..16821Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1575043694:15997..16110TCONS_00063826-exon-scaffold_402-1575043694:15997..16110Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1575043694:15568..15790TCONS_00063826-exon-scaffold_402-1575043694:15568..15790Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1510915933:19811..20128TCONS_00063826-exon-scaffold_402-1510915933:19811..20128Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1510915933:19502..19564TCONS_00063826-exon-scaffold_402-1510915933:19502..19564Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1510915933:18132..18259TCONS_00063826-exon-scaffold_402-1510915933:18132..18259Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1510915933:17267..17359TCONS_00063826-exon-scaffold_402-1510915933:17267..17359Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1510915933:16603..16821TCONS_00063826-exon-scaffold_402-1510915933:16603..16821Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1510915933:15997..16110TCONS_00063826-exon-scaffold_402-1510915933:15997..16110Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1510915933:15568..15790TCONS_00063826-exon-scaffold_402-1510915933:15568..15790Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1491911889:19811..20128TCONS_00063826-exon-scaffold_402-1491911889:19811..20128Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1491911889:19502..19564TCONS_00063826-exon-scaffold_402-1491911889:19502..19564Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1491911889:18132..18259TCONS_00063826-exon-scaffold_402-1491911889:18132..18259Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1491911889:17267..17359TCONS_00063826-exon-scaffold_402-1491911889:17267..17359Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1491911889:16603..16821TCONS_00063826-exon-scaffold_402-1491911889:16603..16821Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1491911889:15997..16110TCONS_00063826-exon-scaffold_402-1491911889:15997..16110Clytia hemisphaericaexon
TCONS_00063826-exon-scaffold_402-1491911889:15568..15790TCONS_00063826-exon-scaffold_402-1491911889:15568..15790Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063826-proteinTCONS_00063826-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_402supercontigscaffold_402:15568..20128 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.95172	1.79452	1.29801	1.02874	1.56547	1.57831	2.01048	2.88688	2.03555	1.96413	5.54936	2.61789	0.964207	0.555473	1.61471	1.70115	2.32055	2.20483	0.402653	1.36536	2.04472	1.4981	1.69764	2.58555	0.223019	0.0675705	1.6802	1.16393	1.51422	2.03142
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
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BLAST of TCONS_00063826 vs. Swiss-Prot (Human)
Match: MF14B (Hippocampus abundant transcript-like protein 1 OS=Homo sapiens GN=MFSD14B PE=2 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 9.338e-71
Identity = 75/96 (78.12%), Postives = 86/96 (89.58%), Query Frame = 1 
Query:  235 DRPSVYHATVVIFLEFFAWGLLTSPSITVLKETFPENTFLMNGIIQGIKGFLSFLPAPLIGALSDVWGRKSFLLLTVFFTCVPIPLLRLNPWWFFA 522
             RPSVYHA +VIFLEFFAWGLLT+P +TVL ETF ++TFLMNG+IQG+KG LSFL APLIGALSDVWGRK FLL TVFFTC PIPL+R++PWW+FA
Sbjct:   41 GRPSVYHAAIVIFLEFFAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLMRISPWWYFA 136

HSP 2 Score: 124.02 bits (310), Expect = 9.338e-71
Identity = 65/98 (66.33%), Postives = 83/98 (84.69%), Query Frame = 3 
Query:  528 ITFSIVFAYVADCTDKSDRSHAYGLVSATFAASLITSPALGAYLGSVYSDSXXXXXXXXXXXXDMLFILVCVPESLPERLRPVSWGKSIPWEKADPFS 821
            +TFS++FAYVAD T + +RS AYG VSATFAASL++SPA+GAYL + Y DS+VV +AT +ALLD+ FILV VPESLPE++RPVSWG  I W++ADPF+
Sbjct:  146 VTFSVIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASYGDSLVVLVATVVALLDICFILVAVPESLPEKMRPVSWGAQISWKQADPFA 243
The following BLAST results are available for this feature:
BLAST of TCONS_00063826 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MF14B9.338e-7178.13Hippocampus abundant transcript-like protein 1 OS=... [more]
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