TCONS_00066516 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066516
Unique NameTCONS_00066516
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1131

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066516 ID=TCONS_00066516|Name=TCONS_00066516|organism=Clytia hemisphaerica|type=transcript|length=1131bp
AACGCATGGAGATTTGGCGGGAAAATCAAGCCCACACACAATTTTAGAac
taaaaaacgaaaaacttGAACTGTGAACTAAAAGAAATTAACTGAGCTAG
CCACTACCATATACAGTATATATCAGATATTTCATATTTAGACTCAACAA
AAAAAGTATAAAGTGAAAGGAACAAAATGGGTaaaaagtctaccaaagga
aaggaaaagaaagaaaaaaggaaagaggaAATTATGAAGAAGAATGAAGC
TGTACTTGCAGTCAAAAATGCAAACATGGCTGATGACCCATTAGCTGCCC
TTCCAGCATTTGCTACTTATAAAAGAAATGAATTGGACCTGACGTTACAT
AGCAAGAGGGCTAGTCAAATGTCAGAAGATGAAATGGATGTATGTTACAA
TCTGGTTAAAGATAACATGCAATTAATgtACGAGAACAGTAATTGGGGAT
GgaatgaaaaagagaaaaagattgaaatgaCTGAAGAAAATGCTAGatAT
TTGTATGCTTTGGACGGTGAAAAGAATATTGTTGCAATGACACACTTTCG
ATTTGACGTTGATGATGATGTAGAAGTCATATACTGttaTGAGATTCAAC
TTGTAAGTTCAATCCGTGGAAAAGGTCTAGGGAAATTCATGATACAGGTT
CTCGAACTTATGGCATTGAAAGCTAAAATGAAGAAAGTTGTGCTAACAGT
TTTTAAAGCAAATTCAAGGGCTGTCAATTTCTTCAACAAACTAAAATACA
CTATAGACTCCACTTCACCGCATTACATTGACCCTCTACATCCTGAAGAC
TATGATTACGAAATTATGAGCAAATCTCTACCAATCAGGTGATCGAAAGC
GCTACCATTTTTAAAGATGATTGAAGGTTTTTTGCACATTCGCTTTAACT
CTGACCGAAATGACACTCATTGGCCCGATTAAGCTCAAAATTTCAATGTG
GTATTGAATACGATCTGTGATCTTAAAGACAGATTTGGCTTCGAGCTGTA
CcaaaaattgtttgatggaTTCAAGAGATTTTTTATGTAAAGAGAAAATG
TaagacaaaaaaagattttttatagaaaactTTTATTTAAACGGAAGATA
GAAAATCGGAATTATATTATATGACATTGCT
Run BLAST on NCBI

protein sequence of TCONS_00066516-protein

>TCONS_00066516-protein ID=TCONS_00066516-protein|Name=TCONS_00066516-protein|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
MGKKSTKGKEKKEKRKEEIMKKNEAVLAVKNANMADDPLAALPAFATYKR
NELDLTLHSKRASQMSEDEMDVCYNLVKDNMQLMYENSNWGWNEKEKKIE
MTEENARYLYALDGEKNIVAMTHFRFDVDDDVEVIYCYEIQLVSSIRGKG
LGKFMIQVLELMALKAKMKKVVLTVFKANSRAVNFFNKLKYTIDSTSPHY
IDPLHPEDYDYEIMSKSLPIR
Run BLAST on NCBI

transcript from alignment at scaffold_456:556405..565048+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066516 ID=TCONS_00066516|Name=TCONS_00066516|organism=Clytia hemisphaerica|type=transcript|length=8644bp|location=Sequence derived from alignment at scaffold_456:556405..565048+ (Clytia hemisphaerica)
AACGCATGGAGATTTGGCGGGAAAATCAAGCCCACACACAATTTTAGAac
taaaaaacgaaaaacttGAACTGTGAACTAAAAGAAATTAACTGAGCTAG
CCACTACCATATACAGTATATATCAGATATTTCATATTTAGGTAGTTAGT
TTTCAGTTTTACATTACTTACTTTCTGTTCAAGACATGGAAAATGcaatt
aaaaatttaatataATAGTACAGTAGTACTCTGTATGTATACACAgtagt
cagtcagtcagtctgACTGAGAATGTGACTGACACTGAGTCAGTATAAAG
AAATCCTTCTAAGGCCACGATCACAAATAAATTGTGTTTGCGTCGTCCAA
CTGactgataatttttcttaaatctcCAATTATTTTGAGGCGAGAAGTCA
CAAAATTCCATCCTTTGCTTCACCCTCCATCTTTACTTCAATCGTGCAAG
TTTCATTGTTTTAGGGCGGAAGAATTCAAACAGACCTAATATCAAACCCT
TTCCTAAAGATCTGCGGGAAGGtgttatagaccttttttcaaagaggcca
ccctgttgaataattatttagtccagcagaaaaacaatgataaaaccacg
cataattattacaatatgcatgatacagtaattatgcatggctctatcat
tgtttttatggctggactacataattattcaacaggacgtcctctttaaa
aaaaggtctattatctCCCTAGTCATCAAAAAAGTAGAATTAGCTACCCA
TGCATAGATTTATAATGAAGCCCAATGGGCTAGATATTGTGCTTAAGAAA
AGATGAACCACTTAGAAGccaaaaacaaggaaaatgataaaagaagaGAT
ACAACAGACAAAGAATTTTATGAAAGAGTCATCACATTAAACCTACACTG
AAACAACCAAAGCACACaaggaaaatcttaaatctgttgttgcggaacaa
aattagaagaggagaggagagaaaaaatatttggcGCCCCGAAAATCTTT
GGTTTAAGAAAGCTAAAGcagctttaaaagtaaccctTTAAAAGCTCAGC
AttttagaaaagctgcacaATTTTTTCtgcatttcagcttggaggtGTGC
TTAATATTATGCTTAGAAACTCAATCTAAGTTTACAAAAACGGCCCCAGC
TCAAAGTGCTCAGAAAAATCCCTGAGTGGGGGTAATTTTTGactgttcaa
aattttacatttttggggcctgggcacTAATCTTTTGGTTTGTATAGCTA
CAATCAAACGAGcatatgaataatttgaagctattgaagttgagcccagt
gtgTTGTGCACATTGAACAAAGCCTGGTCAGTCctgatttcttttttact
ttgaattttCTATTGATTAGCCAGGGACCTTCCTAAAAGTATCAATCGTT
CTTTTTTCTCTTCAGACTCAACAAAAAAAGTATAAAGTGAAAGGAACAAA
ATGGGTGTAAGTAAAGtacaaaattaaattaaatttgaggtgatttttct
tgttttgttcCAGGATTTTGTTAATTTGAGTCTTATCTGCAAAACAAAAT
CTCGTCAGAGTTTGAAATTGAccaatttgaaatattcttGGTCAAATTCT
CTCGCTAAATCTTTACTATAGAATGGTTTAAATAAAATTGTGCAGAATTA
TATGGTTATAAtgatttttatataaatttgaattatagaaaaagtctacc
aaaggaaaggaaaagaaagaaaaaaggaaagagGTTGGATAAATTTAGAT
TGTAATCAGGCTTGAAATAACAGTCTGTGATTTTTAGGGTCCACTTTTTA
TTGATGCAATATTATAACTGGTGATATCTGGATTTATGTATCTGTCAGAG
GActttcatactatctttttagTCAATGTAGGTTGTAAGGAATGAAAGGT
TTTCaaatttccttcattttttattaGTAGTAGGCTATAAATATTTACAA
TCTACTATGTTCCTCAAGATCAAGTTAGGTCTTTTCTNCTTCATTTTTTA
TTAGTAGTAGGCTATAAATATTTACAATCTTCTTTGTTCCTCAAGATCAA
GTTAggtcttttctttttataggaAATTATGAAGAAGAATGAAGCTGTAC
TTGCAGTCAAAAATGCAAACATGGTATATATGTATTttgcttaaatattt
tcaatgtaCCAATGCAGAAGAACTAGCcaaatttttgaattctttgaTTA
AATTTCAATGTTGCTAAAATTATGTCACAATTATTCCTTTTTGAATCGCG
TCTGACAACTTCAAATTATAATCTTTAATTCTACATTAGGCTGATGACCC
ATTAGCTGCCCTTCCAGCATTTGCTACTTATAAAAGAAATGAGTAAGATT
TTAAGCATCATATTATATAAGAGTGGGTGTGTGCAAGTCTtgttaaaaac
tgtttttttttgttttttgtttactttttgacAAGCATTCAAGAGTTCTT
TGATGGGATAAGGAAGTTTTCTAGGTATCATCAGAGTCCTAATGGAAATT
TGAAGCCTTATCTGCAGAATGTTTTTTCAACAACAAACTTCCAACACTTA
TTTTATTGAATGGCATTGTTTTATACAATTAATCTAAATTTGTGTGACCT
TCTCTGGTAATTTTGGAAAAGCAGACCTTTGgttcattttgaagttttta
gaaatttcagaaaacgtCACATAAACTTCAGCTTTTTTTCCCAAACTACC
CTGTGATACGGATTAATAACAAAATTTACTAAAATCACTACTGAGAATAT
TTCAATACCAGAATGCACCGAAAGGAATAAACCAAAATGAACAGTGAAAA
CAACCATCAAATCCCTGCAAATCCTCGTTGAATCTTAAAATTCTTTGata
aatttaactgaaaaacaTTGAATCCCTGAGATTTTGTTAATCTCAATGTT
TTATGTATGAATTTTTTAGATTGGACCTGACGTTACATAGCAAGAGGGCT
AGTCAAATGTCAGAAGATGAAATGGATGTATGTTACAATCTGGTTAAAGA
TAACATGCAATTAATGTGAGCCTAATTTCATACCTAATTTTTATGTAACT
TTATTTTATGGGAAAccaaattaaaggttttatttttacataagtgttcc
agtttcatatcagacacatatttcacaTCAGGACAGtatctgcctattgt
tatattatgctgatataagcaaaaaatgtttttctttttctctttctgac
caatcttgctccgcatccgtgtcaatccaatgtgaaaaagcttgtgaatt
aaaattgatgagtaagcgaACGATATAACtctgatttaaaaaacaaaacc
tttaacataaTCTTGTTTACGTAACATATTTGAAGAATTATTTATTCATT
ACACCCTACTGCTACTGGTTCCTGTCTACGTAATCTTAACAAAGGGAATT
TTGTTCTTTCCATGGGTTATTTAATGCTACAGTATGTGCttactttaaaa
attttaggtACGAGAACAGTAATTGGGGATGgaatgaaaaagagaaaaag
attgaaatgaCTGAAGAAAATGCTAGGTAAATGACAATTCTTTGAGatta
atgacaaaaattctaGGAAGAGAGTACATTAAGAATGATTTCTTATAAGG
GGTGAAGCAGAAAGTTATCCAGGTAATAGTACAAATTACAAAGGttagaa
atcaaaatcttttgaaatgatTAAAGCCTTCTAAATTACTTGAATTCTAT
ACAAGTTGAAgaactttcttttgattttagatATTTGTATGCTTTGGACG
GTGAAAAGAATATTGTTGCAATGACACACTTTCGATTTGACGTTGATGAT
GATGTAGAAGTCATATACTGGTAAGTGTTATACAccttcttcaattttta
aatatatccGTTGACAAGAGGTGACAACTGATGGTGACCTTCGCAGTAGA
GTTGGATTTGgctaaaatcaaataaatttggTTGTTATATTTCTTTTGTA
CTAATAAAAGCATAGTGGgcaacacccctccaacccccacctgaaaaagg
tcacccccacctacatagggttacccccacctgaaatctcATATCAGCCC
AACCCCCACCTTTTTCAGCAACCCCTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGATCCCAGTTAAAAGTCCTGAGGACTACAAACTGGA
AAGGAAAAGActggagaaaaaatgaactCTTTTTAACCTTCAGAACTTAT
GACAGTCAtttgtttctatttttatctagtatagtatgtggaaagttgaa
aaagacaagaaagtacaaaatcaaaggaagttaaatacagaaaacttgac
aacccccacctgaaaaatgttacccccacctacatagggttacccccacc
tgaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccccagaatccag
gggggggtgcccactatgAAAAGTTATatcaaataagttgaaaaagatTG
TCAACAACAGCAAAGTGCTCTACCAGAAGGCGCTTTATAACAAAAACAAT
CTatgttgaaaacaaaacaaagtgcTCTACCAGAATGAGCAATAATATCA
AATCCTCCTTTCAACCCGTCAGCTTTTTTTTTACCGTAAGGTTAAATGAA
TAAGTTGTGTGTGGAGTTCCCCTTTTCGTAACTGTTCCCATTGATTAATG
gactcaatttttcttttagttaTGAGATTCAACTTGTAAGTTCAATCCGT
GGAAAAGGTCTAGGGAAATTCATGATACAGGTTCTCGAACTTATGGCATT
GAAGTAAGTTGTTTGGAAGAGACTGTCGCTTGCTATGTTGAGTTTACCAA
ATTCTGAAAAGCAAGGTCTCATTAATAATTATGTAACTACATTAGAACTG
CATTCCCATTAGCTCATAAATGGACTCTCAAATGTTATAAATTCATTGGA
CTAGCCCCTTTAATATCGGGAGATCTTTTTCAAGCCAAACAAAGTTCAAA
TTGCAATTGTGCGAATATCCTCTGGAAAAATGAgaacatttgcaaaaaaa
gcCGTGGAAAAACATGATCTATTGCCCTTGGAAAAGATTCTACTACTTTC
CGTAAAgtaagggtggacgaactaaaatcaaatttcagaatAGCTTTTAA
CCCCCGGGAAATTTAAACAAGGTTTCTAGAAATTACAACCTTAACCTTGT
GCCTAAAAATAAAATGAGCATATCATTTCAAATCTGGAAGAAGGAAATAT
TAATGGGTGATGCTTTGTCGTCCAACGCATTgggaaaaaaacaatttaaa
ccaaactttttggaaaaatgcaAAACAACGTTTTATAGGACCCCCTGGGA
TTTTTTCTTTTGGGACACCTTGGAAAAGTTCGTCcatcattgggctcttc
cagaaaatgtttgtACATGGGgcggatatattggatattttgtccgtggg
gtagtgaaaaatctgcaaaatttgccttgttttgggGGCAGGCTTGCTct
gattaggggtgattttgaatgtctgGGGTCAACTGGCTTGTCTAGGGGTG
AGATcagtgtccagggggtcaaaattcacaatgtccgggggtaaatttcc
aaaatttaaatgTTATATTCTCCAACccccaaaatcaatttttttcttga
agagcCCATCGTGTATACATataaaaatggaatggcccattgacTTAACA
TATTTTTTATGTTGATGGATCTTAAAGTTTTCCATTTGTTATCAATTTCA
GAGCTAAAATGAAGAAAGTTGTGCTAACAGTTTTTAAAGGTGagagattt
ttattttcactgcCTTACCCCATTTCCATTTTTTAAGGACGGCCCACTCC
CGAAAAAATGGGGCAGGGTCGCAAAACCTTCTGAAGAATTCGACTTCgtt
ttggaatattttctgATTGTCTTTTGAATTTCCTTAAGAAGAGATTTGAT
CACTTAGGCACGTCAATTTCAAAGTTTCTAGGGGCAAGGCAATCAAAAAA
GGGTATTTAATCCGACGATTAATAGAATTGAAGAGATAGCATGAAAGGGA
ATTGCTCGGGGTTCACTTAAggtttttgatagactggatggcgcaaTCAA
TTGGCCCAGTAGTATATGGCAGCTCTAAATTTTGAGCTAGATTTTAGATG
TTGTTTTTGCCAATTtaaaaatagtcgaacgtgcgcaacgcactgggctc
aacttcagtggcttcaaattattcataggcccaattgtagacccccagat
atttacccaatgaacaagtgtgccaaatttcaaccaaatccgaccatttt
ggaggcctgtaggctgcttcacagctttagcctcgttttggcaaaaaact
catccctaggccccaaaaatctaaatttttgaaaaatgcaaaaagcaccc
ccagatattcacccaaggaacaagtgtgcaaaatttcagccaaatcaaac
aattcttaAAGTCTCCAggttgccccaaagttttagcctcgttttggcga
aaactcgtccccaggccccaaaaatcaaaatttccaaaaaatgaaaaaaa
acaccaccagatattcacccaaggaacaagtttgcaaaatttcagccaga
tcgaacaattcttaaagtctccaggctgccccaaaattttagcctcgttt
tggcaaaaaactcgtccccaggccccaaaaatcaaaatttttgaaaaatg
aaaaaaaagcccccagatattcacccaaggaacaagtgtgcaaaatttca
gccaaatcaaacaatttttgaagtctccaggttgccccaaagttttagcc
tcgttttggcgaaaactcgtccccaggccccaaaaatcaaaatttttgaa
aaatgaaaaaaacacccccagatattcacccaaggaacaagtgtacaaaa
tttcagccaaatcgaacaatttttgaagtctccaggctgccccaaagttt
tgggacatacacacacacagacagacacacacacacacattctcagattc
taactcaactgaagttgagaaaatgATGGGGCAGTGTTTTTATTAGAAAA
AGGGTATTGTAAACCTGTTTATTAACATGTTGGTTTCTCATGCttcttta
ttatatttttcaatgcTCCTAAGTAGCTTCATCGCTAATTGAAATATtgg
tatttttctttcaaagcgGGCTCGTCAagtgctcctagtctacttcactg
gactcagaaAGCATTATCAGAAAGCAAAATTCAGCCAGTAGGCTGTAGTC
TAGAAAGAGGACGGATCTAGAGAAATAGGGCCAGTCCCCTTTTTCAATTA
TTTGTAAAACTCAAACTTTGTTATTCACATAGAGCCACTGACAATATAAT
GTTTCCTCTTCTCTTTAGCAAATTCAAGGGCTGTCAATTTCTTCAACAAA
CTAAAGTAAGTCTTTTTTACCTGACATATCTGGACATATTCCTATTTTCC
TGGAATCAATTAGAAATATAAATGTGATGACAATTTGAACTCGTAATGTT
AGGTAGAACTTGCACTTTATTCATTTTGATCATTGCCTGACCATAAAACG
GTCGTATGAAATCTTCCATTTATACCTAGATGTGTCATACCCAGcgggca
cacaacgttgtttcaacgtttatctaacgtttacaacgtccatataacgt
ccTACTTTTGAATTGTCTGCGTATCAATAAACAATCCCATAGCGTACCTC
GGTGAATTTAAAAATAGTAACAAATTTGCACAAATATATTCGTTTGTACG
ACTTGCAATCCCATCCTCCCTTGCGTTAATTTCTCTTGCACATTAAAATC
ttacaatatcaaaagaaaggcAATATCTTTCACGGTTTTCCAATAATTTC
GAAATGAACTATGTGATTGAGACTCGTACAAATTTGAGTTGACATAATTA
TGACGTATTGGACGCGGAGTTCATGttgtaataatatttttgaattcctc
tTGCTCAGATACACTATAGACTCCACTTCACCGCATTACATTGACCCTCT
ACATCCTGAAGACTATGATTACGAAATTATGAGCAAATCTCTACCAATCA
GGTGATCGAAAGCGCTACCATTTTTAAAGATGATTGAAGGTTTTTTGCAC
ATTCGCTTTAACTCTGACCGAAATGACACTCATTGGCCCGATTAAGCTCA
AAATTTCAATGTGGTATTGAATACGATCTGTGATCTTAAAGACAGATTTG
GCTTCGAGCTGTACcaaaaattgtttgatggaTTCAAGAGATTTTTTATG
TAAAGAGAAAATGTaagacaaaaaaagattttttatagaaaactTTTATT
TAAACGGAAGATAGAAAATCGGAATTATATTATATGACATTGCT

Coding sequence (CDS) from alignment at scaffold_456:556405..565048+

>TCONS_00066516 ID=TCONS_00066516|Name=TCONS_00066516|organism=Clytia hemisphaerica|type=CDS|length=7326bp|location=Sequence derived from alignment at scaffold_456:556405..565048+ (Clytia hemisphaerica)
ATGGGTaaaaagtctaccaaaggaaaggaaaagaaagaaaaaaggaaaga
ggaAATTATGAAGAAGAATGAAGCTGTACTTGCAGTCAAAAATGCAAACA
TGGCTGATGACCCATTAGCTGCCCTTCCAGCATTTGCTACTTATAAAAGA
AATGAATTGGACCTGACGTTACATAGCAAGAGGGCTAGTCAAATGTCAGA
AGATGAAATGGATGTATGTTACAATCTGGTTAAAGATAACATGCAATTAA
TgtACGAGAACAGTAATTGGGGATGgaatgaaaaagagaaaaagattgaa
atgaCTGAAGAAAATGCTAGatATTTGTATGCTTTGGACGGTGAAAAGAA
TATTGTTGCAATGACACACTTTCGATTTGACGTTGATGATGATGTAGAAG
TCATATACTGttaTGAGATTCAACTTGTAAGTTCAATCCGTGGAAAAGGT
CTAGGGAAATTCATGATACAGGTTCTCGAACTTATGGCATTGAAAGCTAA
AATGAAGAAAGTTGTGCTAACAGTTTTTAAAGCAAATTCAAGGGCTGTCA
ATTTCTTCAACAAACTAAAATACACTATAGACTCCACTTCACCGCATTAC
ATTGACCCTCTACATCCTGAAGACTATGATTACGAAATTATGAGCAAATC
TCTACCAATCAGGTGAATGGGTaaaaagtctaccaaaggaaaggaaaaga
aagaaaaaaggaaagaggaAATTATGAAGAAGAATGAAGCTGTACTTGCA
GTCAAAAATGCAAACATGGCTGATGACCCATTAGCTGCCCTTCCAGCATT
TGCTACTTATAAAAGAAATGAATTGGACCTGACGTTACATAGCAAGAGGG
CTAGTCAAATGTCAGAAGATGAAATGGATGTATGTTACAATCTGGTTAAA
GATAACATGCAATTAATgtACGAGAACAGTAATTGGGGATGgaatgaaaa
agagaaaaagattgaaatgaCTGAAGAAAATGCTAGatATTTGTATGCTT
TGGACGGTGAAAAGAATATTGTTGCAATGACACACTTTCGATTTGACGTT
GATGATGATGTAGAAGTCATATACTGttaTGAGATTCAACTTGTAAGTTC
AATCCGTGGAAAAGGTCTAGGGAAATTCATGATACAGGTTCTCGAACTTA
TGGCATTGAAAGCTAAAATGAAGAAAGTTGTGCTAACAGTTTTTAAAGCA
AATTCAAGGGCTGTCAATTTCTTCAACAAACTAAAATACACTATAGACTC
CACTTCACCGCATTACATTGACCCTCTACATCCTGAAGACTATGATTACG
AAATTATGAGCAAATCTCTACCAATCAGGTGAATGGGTaaaaagtctacc
aaaggaaaggaaaagaaagaaaaaaggaaagaggaAATTATGAAGAAGAA
TGAAGCTGTACTTGCAGTCAAAAATGCAAACATGGCTGATGACCCATTAG
CTGCCCTTCCAGCATTTGCTACTTATAAAAGAAATGAATTGGACCTGACG
TTACATAGCAAGAGGGCTAGTCAAATGTCAGAAGATGAAATGGATGTATG
TTACAATCTGGTTAAAGATAACATGCAATTAATgtACGAGAACAGTAATT
GGGGATGgaatgaaaaagagaaaaagattgaaatgaCTGAAGAAAATGCT
AGatATTTGTATGCTTTGGACGGTGAAAAGAATATTGTTGCAATGACACA
CTTTCGATTTGACGTTGATGATGATGTAGAAGTCATATACTGttaTGAGA
TTCAACTTGTAAGTTCAATCCGTGGAAAAGGTCTAGGGAAATTCATGATA
CAGGTTCTCGAACTTATGGCATTGAAAGCTAAAATGAAGAAAGTTGTGCT
AACAGTTTTTAAAGCAAATTCAAGGGCTGTCAATTTCTTCAACAAACTAA
AATACACTATAGACTCCACTTCACCGCATTACATTGACCCTCTACATCCT
GAAGACTATGATTACGAAATTATGAGCAAATCTCTACCAATCAGGTGAAT
GGGTaaaaagtctaccaaaggaaaggaaaagaaagaaaaaaggaaagagg
aAATTATGAAGAAGAATGAAGCTGTACTTGCAGTCAAAAATGCAAACATG
GCTGATGACCCATTAGCTGCCCTTCCAGCATTTGCTACTTATAAAAGAAA
TGAATTGGACCTGACGTTACATAGCAAGAGGGCTAGTCAAATGTCAGAAG
ATGAAATGGATGTATGTTACAATCTGGTTAAAGATAACATGCAATTAATg
tACGAGAACAGTAATTGGGGATGgaatgaaaaagagaaaaagattgaaat
gaCTGAAGAAAATGCTAGatATTTGTATGCTTTGGACGGTGAAAAGAATA
TTGTTGCAATGACACACTTTCGATTTGACGTTGATGATGATGTAGAAGTC
ATATACTGttaTGAGATTCAACTTGTAAGTTCAATCCGTGGAAAAGGTCT
AGGGAAATTCATGATACAGGTTCTCGAACTTATGGCATTGAAAGCTAAAA
TGAAGAAAGTTGTGCTAACAGTTTTTAAAGCAAATTCAAGGGCTGTCAAT
TTCTTCAACAAACTAAAATACACTATAGACTCCACTTCACCGCATTACAT
TGACCCTCTACATCCTGAAGACTATGATTACGAAATTATGAGCAAATCTC
TACCAATCAGGTGAATGGGTaaaaagtctaccaaaggaaaggaaaagaaa
gaaaaaaggaaagaggaAATTATGAAGAAGAATGAAGCTGTACTTGCAGT
CAAAAATGCAAACATGGCTGATGACCCATTAGCTGCCCTTCCAGCATTTG
CTACTTATAAAAGAAATGAATTGGACCTGACGTTACATAGCAAGAGGGCT
AGTCAAATGTCAGAAGATGAAATGGATGTATGTTACAATCTGGTTAAAGA
TAACATGCAATTAATgtACGAGAACAGTAATTGGGGATGgaatgaaaaag
agaaaaagattgaaatgaCTGAAGAAAATGCTAGatATTTGTATGCTTTG
GACGGTGAAAAGAATATTGTTGCAATGACACACTTTCGATTTGACGTTGA
TGATGATGTAGAAGTCATATACTGttaTGAGATTCAACTTGTAAGTTCAA
TCCGTGGAAAAGGTCTAGGGAAATTCATGATACAGGTTCTCGAACTTATG
GCATTGAAAGCTAAAATGAAGAAAGTTGTGCTAACAGTTTTTAAAGCAAA
TTCAAGGGCTGTCAATTTCTTCAACAAACTAAAATACACTATAGACTCCA
CTTCACCGCATTACATTGACCCTCTACATCCTGAAGACTATGATTACGAA
ATTATGAGCAAATCTCTACCAATCAGGTGAATGGGTaaaaagtctaccaa
aggaaaggaaaagaaagaaaaaaggaaagaggaAATTATGAAGAAGAATG
AAGCTGTACTTGCAGTCAAAAATGCAAACATGGCTGATGACCCATTAGCT
GCCCTTCCAGCATTTGCTACTTATAAAAGAAATGAATTGGACCTGACGTT
ACATAGCAAGAGGGCTAGTCAAATGTCAGAAGATGAAATGGATGTATGTT
ACAATCTGGTTAAAGATAACATGCAATTAATgtACGAGAACAGTAATTGG
GGATGgaatgaaaaagagaaaaagattgaaatgaCTGAAGAAAATGCTAG
atATTTGTATGCTTTGGACGGTGAAAAGAATATTGTTGCAATGACACACT
TTCGATTTGACGTTGATGATGATGTAGAAGTCATATACTGttaTGAGATT
CAACTTGTAAGTTCAATCCGTGGAAAAGGTCTAGGGAAATTCATGATACA
GGTTCTCGAACTTATGGCATTGAAAGCTAAAATGAAGAAAGTTGTGCTAA
CAGTTTTTAAAGCAAATTCAAGGGCTGTCAATTTCTTCAACAAACTAAAA
TACACTATAGACTCCACTTCACCGCATTACATTGACCCTCTACATCCTGA
AGACTATGATTACGAAATTATGAGCAAATCTCTACCAATCAGGTGAATGG
GTaaaaagtctaccaaaggaaaggaaaagaaagaaaaaaggaaagaggaA
ATTATGAAGAAGAATGAAGCTGTACTTGCAGTCAAAAATGCAAACATGGC
TGATGACCCATTAGCTGCCCTTCCAGCATTTGCTACTTATAAAAGAAATG
AATTGGACCTGACGTTACATAGCAAGAGGGCTAGTCAAATGTCAGAAGAT
GAAATGGATGTATGTTACAATCTGGTTAAAGATAACATGCAATTAATgtA
CGAGAACAGTAATTGGGGATGgaatgaaaaagagaaaaagattgaaatga
CTGAAGAAAATGCTAGatATTTGTATGCTTTGGACGGTGAAAAGAATATT
GTTGCAATGACACACTTTCGATTTGACGTTGATGATGATGTAGAAGTCAT
ATACTGttaTGAGATTCAACTTGTAAGTTCAATCCGTGGAAAAGGTCTAG
GGAAATTCATGATACAGGTTCTCGAACTTATGGCATTGAAAGCTAAAATG
AAGAAAGTTGTGCTAACAGTTTTTAAAGCAAATTCAAGGGCTGTCAATTT
CTTCAACAAACTAAAATACACTATAGACTCCACTTCACCGCATTACATTG
ACCCTCTACATCCTGAAGACTATGATTACGAAATTATGAGCAAATCTCTA
CCAATCAGGTGAATGGGTaaaaagtctaccaaaggaaaggaaaagaaaga
aaaaaggaaagaggaAATTATGAAGAAGAATGAAGCTGTACTTGCAGTCA
AAAATGCAAACATGGCTGATGACCCATTAGCTGCCCTTCCAGCATTTGCT
ACTTATAAAAGAAATGAATTGGACCTGACGTTACATAGCAAGAGGGCTAG
TCAAATGTCAGAAGATGAAATGGATGTATGTTACAATCTGGTTAAAGATA
ACATGCAATTAATgtACGAGAACAGTAATTGGGGATGgaatgaaaaagag
aaaaagattgaaatgaCTGAAGAAAATGCTAGatATTTGTATGCTTTGGA
CGGTGAAAAGAATATTGTTGCAATGACACACTTTCGATTTGACGTTGATG
ATGATGTAGAAGTCATATACTGttaTGAGATTCAACTTGTAAGTTCAATC
CGTGGAAAAGGTCTAGGGAAATTCATGATACAGGTTCTCGAACTTATGGC
ATTGAAAGCTAAAATGAAGAAAGTTGTGCTAACAGTTTTTAAAGCAAATT
CAAGGGCTGTCAATTTCTTCAACAAACTAAAATACACTATAGACTCCACT
TCACCGCATTACATTGACCCTCTACATCCTGAAGACTATGATTACGAAAT
TATGAGCAAATCTCTACCAATCAGGTGAATGGGTaaaaagtctaccaaag
gaaaggaaaagaaagaaaaaaggaaagaggaAATTATGAAGAAGAATGAA
GCTGTACTTGCAGTCAAAAATGCAAACATGGCTGATGACCCATTAGCTGC
CCTTCCAGCATTTGCTACTTATAAAAGAAATGAATTGGACCTGACGTTAC
ATAGCAAGAGGGCTAGTCAAATGTCAGAAGATGAAATGGATGTATGTTAC
AATCTGGTTAAAGATAACATGCAATTAATgtACGAGAACAGTAATTGGGG
ATGgaatgaaaaagagaaaaagattgaaatgaCTGAAGAAAATGCTAGat
ATTTGTATGCTTTGGACGGTGAAAAGAATATTGTTGCAATGACACACTTT
CGATTTGACGTTGATGATGATGTAGAAGTCATATACTGttaTGAGATTCA
ACTTGTAAGTTCAATCCGTGGAAAAGGTCTAGGGAAATTCATGATACAGG
TTCTCGAACTTATGGCATTGAAAGCTAAAATGAAGAAAGTTGTGCTAACA
GTTTTTAAAGCAAATTCAAGGGCTGTCAATTTCTTCAACAAACTAAAATA
CACTATAGACTCCACTTCACCGCATTACATTGACCCTCTACATCCTGAAG
ACTATGATTACGAAATTATGAGCAAATCTCTACCAATCAGGTGAATGGGT
aaaaagtctaccaaaggaaaggaaaagaaagaaaaaaggaaagaggaAAT
TATGAAGAAGAATGAAGCTGTACTTGCAGTCAAAAATGCAAACATGGCTG
ATGACCCATTAGCTGCCCTTCCAGCATTTGCTACTTATAAAAGAAATGAA
TTGGACCTGACGTTACATAGCAAGAGGGCTAGTCAAATGTCAGAAGATGA
AATGGATGTATGTTACAATCTGGTTAAAGATAACATGCAATTAATgtACG
AGAACAGTAATTGGGGATGgaatgaaaaagagaaaaagattgaaatgaCT
GAAGAAAATGCTAGatATTTGTATGCTTTGGACGGTGAAAAGAATATTGT
TGCAATGACACACTTTCGATTTGACGTTGATGATGATGTAGAAGTCATAT
ACTGttaTGAGATTCAACTTGTAAGTTCAATCCGTGGAAAAGGTCTAGGG
AAATTCATGATACAGGTTCTCGAACTTATGGCATTGAAAGCTAAAATGAA
GAAAGTTGTGCTAACAGTTTTTAAAGCAAATTCAAGGGCTGTCAATTTCT
TCAACAAACTAAAATACACTATAGACTCCACTTCACCGCATTACATTGAC
CCTCTACATCCTGAAGACTATGATTACGAAATTATGAGCAAATCTCTACC
AATCAGGTGAATGGGTaaaaagtctaccaaaggaaaggaaaagaaagaaa
aaaggaaagaggaAATTATGAAGAAGAATGAAGCTGTACTTGCAGTCAAA
AATGCAAACATGGCTGATGACCCATTAGCTGCCCTTCCAGCATTTGCTAC
TTATAAAAGAAATGAATTGGACCTGACGTTACATAGCAAGAGGGCTAGTC
AAATGTCAGAAGATGAAATGGATGTATGTTACAATCTGGTTAAAGATAAC
ATGCAATTAATgtACGAGAACAGTAATTGGGGATGgaatgaaaaagagaa
aaagattgaaatgaCTGAAGAAAATGCTAGatATTTGTATGCTTTGGACG
GTGAAAAGAATATTGTTGCAATGACACACTTTCGATTTGACGTTGATGAT
GATGTAGAAGTCATATACTGttaTGAGATTCAACTTGTAAGTTCAATCCG
TGGAAAAGGTCTAGGGAAATTCATGATACAGGTTCTCGAACTTATGGCAT
TGAAAGCTAAAATGAAGAAAGTTGTGCTAACAGTTTTTAAAGCAAATTCA
AGGGCTGTCAATTTCTTCAACAAACTAAAATACACTATAGACTCCACTTC
ACCGCATTACATTGACCCTCTACATCCTGAAGACTATGATTACGAAATTA
TGAGCAAATCTCTACCAATCAGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041615XLOC_041615Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066516-proteinTCONS_00066516-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066516-exon-scaffold_456-1491911889:556405..556545TCONS_00066516-exon-scaffold_456-1491911889:556405..556545Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:556405..556545TCONS_00066516-exon-scaffold_456-1510915933:556405..556545Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:556405..556545TCONS_00066516-exon-scaffold_456-1575043694:556405..556545Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:557820..557860TCONS_00066516-exon-scaffold_456-1491911889:557820..557860Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:557820..557860TCONS_00066516-exon-scaffold_456-1510915933:557820..557860Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:557820..557860TCONS_00066516-exon-scaffold_456-1575043694:557820..557860Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:558093..558137TCONS_00066516-exon-scaffold_456-1491911889:558093..558137Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:558093..558137TCONS_00066516-exon-scaffold_456-1510915933:558093..558137Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:558093..558137TCONS_00066516-exon-scaffold_456-1575043694:558093..558137Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:558477..558527TCONS_00066516-exon-scaffold_456-1491911889:558477..558527Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:558477..558527TCONS_00066516-exon-scaffold_456-1510915933:558477..558527Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:558477..558527TCONS_00066516-exon-scaffold_456-1575043694:558477..558527Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:558694..558746TCONS_00066516-exon-scaffold_456-1491911889:558694..558746Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:558694..558746TCONS_00066516-exon-scaffold_456-1510915933:558694..558746Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:558694..558746TCONS_00066516-exon-scaffold_456-1575043694:558694..558746Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:559324..559419TCONS_00066516-exon-scaffold_456-1491911889:559324..559419Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:559324..559419TCONS_00066516-exon-scaffold_456-1510915933:559324..559419Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:559324..559419TCONS_00066516-exon-scaffold_456-1575043694:559324..559419Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:559862..559930TCONS_00066516-exon-scaffold_456-1491911889:559862..559930Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:559862..559930TCONS_00066516-exon-scaffold_456-1510915933:559862..559930Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:559862..559930TCONS_00066516-exon-scaffold_456-1575043694:559862..559930Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:560135..560224TCONS_00066516-exon-scaffold_456-1491911889:560135..560224Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:560135..560224TCONS_00066516-exon-scaffold_456-1510915933:560135..560224Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:560135..560224TCONS_00066516-exon-scaffold_456-1575043694:560135..560224Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:561424..561507TCONS_00066516-exon-scaffold_456-1491911889:561424..561507Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:561424..561507TCONS_00066516-exon-scaffold_456-1510915933:561424..561507Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:561424..561507TCONS_00066516-exon-scaffold_456-1575043694:561424..561507Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:562456..562493TCONS_00066516-exon-scaffold_456-1491911889:562456..562493Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:562456..562493TCONS_00066516-exon-scaffold_456-1510915933:562456..562493Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:562456..562493TCONS_00066516-exon-scaffold_456-1575043694:562456..562493Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:564073..564109TCONS_00066516-exon-scaffold_456-1491911889:564073..564109Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:564073..564109TCONS_00066516-exon-scaffold_456-1510915933:564073..564109Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:564073..564109TCONS_00066516-exon-scaffold_456-1575043694:564073..564109Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1491911889:564663..565048TCONS_00066516-exon-scaffold_456-1491911889:564663..565048Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1510915933:564663..565048TCONS_00066516-exon-scaffold_456-1510915933:564663..565048Clytia hemisphaericaexon
TCONS_00066516-exon-scaffold_456-1575043694:564663..565048TCONS_00066516-exon-scaffold_456-1575043694:564663..565048Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:556405..565048 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
146.798	142.138	121.337	105.197	13.336	10.0873	34.877	36.264	53.2104	35.2643	31.9673	28.8302	20.473	19.2416	22.7674	24.6439	49.9441	44.8255	3.9268	8.38944	36.8318	35.4405	67.5468	61.6505	27.9278	31.488	30.7605	18.8074	30.366	28.893
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000182GNAT_dom
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0008080N-acetyltransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008080 N-acetyltransferase activity
Blast
[Close]
BLAST of TCONS_00066516 vs. Swiss-Prot (Human)
Match: NAA40 (N-alpha-acetyltransferase 40 OS=Homo sapiens GN=NAA40 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.795e-37
Identity = 83/170 (48.82%), Postives = 114/170 (67.06%), Query Frame = 3 
Query:  318 YKRNELDLTLHSKRASQMSEDEMDVCYNLVKDNMQLMYENSNWGWNEKEKKIEMTEENARYLYALDGEKNIVAMTHFRFDVDDDVEVIYCYEIQLVSSIRGKGLGKFMIQXXXXXXXXXXXXXXXXXXFKANSRAVNFFNK-LKYTIDSTSPHYIDPLHPEDYDYEIMSK 824
            Y RN L++++  KR S +    +D  ++L K NMQ MYE S WGW ++EK+ EMT++ A YL A +     VA +HFRFDV+   EV+YCYE+QL S +R KGLGKF+IQ+L+LMA   +MKKV+LTVFK N  A  FF + L++ ID +SP  +     ED  YEI+S+
Sbjct:   48 YDRNGLNVSIECKRVSGLEPATVDWAFDLTKTNMQTMYEQSEWGWKDREKREEMTDDRAWYLIAWENSSVPVAFSHFRFDVECGDEVLYCYEVQLESKVRRKGLGKFLIQILQLMANSTQMKKVMLTVFKHNHGAYQFFREALQFEIDDSSPS-MSGCCGEDCSYEILSR 216
The following BLAST results are available for this feature:
BLAST of TCONS_00066516 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAA402.795e-3748.82N-alpha-acetyltransferase 40 OS=Homo sapiens GN=NA... [more]
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