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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069705 ID=TCONS_00069705|Name=TCONS_00069705|organism=Clytia hemisphaerica|type=transcript|length=3067bp
GTTTGATCATATGATAATCTGTATTAATTTCAGATCAAAGAGAAACTTTT
GTGATATTTGTGTGTTTATTATGACCTCTTAATGTTGTATCTTGCCGACG
AAAGCAATTTCTTTCACAATACATAAGTACTAGGAAAATAGAACGCGTTT
ACAAAACGTTTAAATATATAAAGTGATTGATAGGATCTTTATGAATCAAC
ATCAGGAAATATTTTGAAGAGCAAAGAAGTAATCAAAATATTAAACGTTG
TTGGAATCGTCTTCAATTGTACAAAAAAAGTGTTATCAACATGATACTCG
GCGGATCGAAAAGCAAAGTTGATATAAGAACCAAAAGCAAAGTCGATTTC
CGTTTGAAAAGAGTCGACATCATAGCCCAAGGATCCATTTCTCAAATCAA
GTTTACATACGATGATGAGAGTATTTGGTGCTATGGGCCCGATCGTGGAA
CAAAATCCAACCGACCAATCATTCTACACGAGGGAGAATATTTAGTTCGA
GTCAGCCATGAACGGCTGTATGATTACGCATGCGCTGGAGCATTGGTTGA
GTTCGAAACAAACAAAGGGCGTGTGTTTCATTACACCCCTGGTAATTCAT
GGCGTGGATATGCAACAGGCTGGGAAAGCGAGACAACAACAGTCAAAGTT
GAAAACGGTATGGAAATCATCAGTTTGGTGATTAAGCGAGGCATTTTAAT
CGGTATCGAGCAACAACCAATAGCTGAGGAAAATAAAGGACAAACTAAAC
AAAAAGAATGGTACGTGAGCTGTTATTCTGCAGGGAAAGAAGACATAGAT
CTCAATCATAATAgttcgaaagaaaaaaatgaagaagttgttttcaaata
tttcaacaccaaaaaggAAGCACTGAAACATTGGAATGATTTACAGGCGT
TGGTggcaaagaaaaaagaaagaggagCCATGCTGGTTGATTGCTTATCA
GCTAAGGTTCTTAAATCAACTGGTTCAGATGACATTGTGGAAAGGTGTAA
AAAGGAATCGATCGAGAAAGGTTTTTGTGCTGAGGATCAACATGATGAAT
CGATTTTCCAAGTTATCTGGCTCATGTATCGATCCATTATGACTACCAGG
GACATTGTAATCTTCCTCTTAACCATTCTATTGAAATCCATTGCCGATCT
ACTTAGCGTCCACTTACAGTTCGTTAAAGGAAGCATCCTCGCCCTTTTAG
TATCGACCTTCGACTCAGAAACACTAGACAAGAACAGTTACGTGCGATTC
ACATGCAATTATTTTTATACTTGTGATACAGACAAGCCTTTAAGTATCGG
GAGAGCTTTACTGATTTCAGGATGCATTATCAAACTTGTATCAACGGCAG
TAAACATGATTGATATCTATATTGAACAAAATTTGAATTCTGGTCGAAAG
CTTGAAATGAGAAGGAGTATTTTGAAACACGCCATTAGGCTAGATCAAGC
ATTTTATGATGTCAACTCATCGGGCCATATCAACGAATCAATGCAAGTTA
ATTCCATTCATCGCTTGGCAACAGGGCAGATTCCCAGAGTCATACAAACC
ATTATTTCTATCTTTTTAAACCTGTATTACATTATCAAAATCGATTTCTA
TCTTGGAGCATTCACCATGTTTGTCACGACCTTCAATACAACAGTCTTCG
TTAAAAGGTTCCATAATATGCTCAAAAAGTCATGGAAGTATGAATTAAAA
TGGGACATGGCACTTAGAGATGTAAAATCTAAACTGACTGGTAATCGAGT
TCTAGTGAAAATGTTTGCGAATGAAGATAAATACTTTCGAGAATATGACC
AGATATACGATGAATGTATGACTAGCTTCCAGTCTAAGTCGATCACATAT
TGTTTATACATTGCTGCTCAACAATTGACTGGATTCGTTACTTTTGCTGT
CAGTATTTACATCTTTTTGGATCATTTGACAGAAACTAAACTAACCACAG
CTGAAATCACCAGCTTCTTCTTCCTGCTACAAACATTTAGTGGGAATGTG
CGATCCTTTTTCTGGCAAgatgaaaacatcaaagaaaatgttcgtcATTT
GGATAAATTCATTCGTTTAAAGAATCAAGTTCCTGGTATGGTTGATGGCG
ATGAAGTGATTGAAGATTTGAAAggagaaattatttttgaagatGTTGAT
TTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGAAGTTCAATCT
GAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGACTCTGGTGCAG
GAAAATCTACCATCGCTAAACTCATCATGAGAGTTTACGATCCTGATTCT
GGTAGAATTACAGTCGATGGTCATGATATGAAATCATTGAACATTCCCAA
GCTTCATAAAGAGATGGGAATTGTTTCTCAAAGCCCTGGTCTTATTACAG
GAACCTTAGAAGAAAACATCGCTTATGGTTCGATAAAAGACGTTTGCAGC
CGCGAAGACGTCGAAAGAGCAGCGCGATTAACTAAGTGTGATTTCATCGA
TAAATTTCGTTCAGGCTATGACACATATGCTGGAGGTTCAGGAATGCAGT
TATCTGGTGGACAAAANCATGACTAGCTTCCAGTCTAAGTCGATCACATA
TTGTTTATACATTGCTGCTCAACAATTGACTGGATTCGTTACTTTTGCTG
TCAGTATTTACATCTTTTTGGATCATTTGACAGAAACTAAACTAACCACA
GCTGAAATCACCAGCTTCTTCTTCCTGCTACAAACATTTAGTGGGAATGT
GCGATCCTTTTTCTGGCAAgatgaaaacatcaaagaaaatgttcgtcATT
TGGATAAATTCATTCGTTTAAAGAATCAAGTTCCTGGTATGGTTGATGGC
GATGAAGTGATTAAAGATTTGAAAggagaaattatttttgaagatGTTGA
TTTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGAAGTTCAATC
TGAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGACTCTGGTGCA
GGTAAGCTTTTTAACCAAAaatcaatttatattttaacATTGTCTTCAAT
TTCAATCAAGCTTGAAC Run BLAST on NCBI protein sequence of TCONS_00069705-protein >TCONS_00069705-protein ID=TCONS_00069705-protein|Name=TCONS_00069705-protein|organism=Clytia hemisphaerica|type=polypeptide|length=761bp
MILGGSKSKVDIRTKSKVDFRLKRVDIIAQGSISQIKFTYDDESIWCYGP
DRGTKSNRPIILHEGEYLVRVSHERLYDYACAGALVEFETNKGRVFHYTP
GNSWRGYATGWESETTTVKVENGMEIISLVIKRGILIGIEQQPIAEENKG
QTKQKEWYVSCYSAGKEDIDLNHNSSKEKNEEVVFKYFNTKKEALKHWND
LQALVAKKKERGAMLVDCLSAKVLKSTGSDDIVERCKKESIEKGFCAEDQ
HDESIFQVIWLMYRSIMTTRDIVIFLLTILLKSIADLLSVHLQFVKGSIL
ALLVSTFDSETLDKNSYVRFTCNYFYTCDTDKPLSIGRALLISGCIIKLV
STAVNMIDIYIEQNLNSGRKLEMRRSILKHAIRLDQAFYDVNSSGHINES
MQVNSIHRLATGQIPRVIQTIISIFLNLYYIIKIDFYLGAFTMFVTTFNT
TVFVKRFHNMLKKSWKYELKWDMALRDVKSKLTGNRVLVKMFANEDKYFR
EYDQIYDECMTSFQSKSITYCLYIAAQQLTGFVTFAVSIYIFLDHLTETK
LTTAEITSFFFLLQTFSGNVRSFFWQDENIKENVRHLDKFIRLKNQVPGM
VDGDEVIEDLKGEIIFEDVDFSYPSRPLEPVLKKFNLKIQPNKMTAIVGD
SGAGKSTIAKLIMRVYDPDSGRITVDGHDMKSLNIPKLHKEMGIVSQSPG
LITGTLEENIAYGSIKDVCSREDVERAARLTKCDFIDKFRSGYDTYAGGS
GMQLSGGQXHD Run BLAST on NCBI transcript from alignment at scaffold_506:102645..106233- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069705 ID=TCONS_00069705|Name=TCONS_00069705|organism=Clytia hemisphaerica|type=transcript|length=3589bp|location=Sequence derived from alignment at scaffold_506:102645..106233- (Clytia hemisphaerica)
GTTTGATCATATGATAATCTGTATTAATTTCAGATCAAAGAGAAACTTTT
GTGATATTTGTGTGTTTATTATGACCTCTTAATGTTGTATCTTGCCGACG
AAAGCAATTTCTTTCACAATACATAAGTACTAGGAAAATAGAACGCGTTT
ACAAAACGTTTAAATATATAAAGTGATTGATAGGATCTTTATGAATCAAC
ATCAGGAAATATTTTGAAGAGCAAAGAAGTAATCAAAATATTAAACGTTG
TTGGAATCGTCTTCAATTGTACAAAAAAAGGTTTGTACTTATCTCAGTTC
GCATATATTTCACGGGCAAGCACTTATTTTGACGACGATCACCTTTGACA
CGTTTAGAATAATACTCTTCAAAGTTTCAATTCCAGCCTGTGGGAGTGGG
ATATTTTGAAGTTTTAAAAGTTGCAGGTCTTTGGAAATATATTATAAATT
GATTTCCACTCTTTTCATAGTGTTATCAACATGATACTCGGCGGATCGAA
AAGCAAAGTTGATATAAGAACCAAAAGCAAAGTCGATTTCCGTTTGAAAA
GAGTCGACATCATAGCCCAAGGATCCATTTCTCAAATCAAGTTTACATAC
GATGATGAGAGTATTTGGTGCTATGGGCCCGATCGTGGAACAAAATCCAA
CCGACCAATCATTCTACACGAGGGAGAATATTTAGTTCGAGTCAGCCATG
AACGGCTGTATGATTACGCATGCGCTGGAGCATTGGTTGAGTTCGAAACA
AACAAAGGGCGTGTGTTTCATTACACCCCTGGTAATTCATGGCGTGGATA
TGCAACAGGCTGGGAAAGCGAGACAACAACAGTCAAAGTTGAAAACGGTA
TGGAAATCATCAGTTTGGTGATTAAGCGAGGCATTTTAATCGGTATCGAG
CAACAACCAATAGCTGAGGAAAATAAAGGACAAACTAAACAAAAAGAATG
GTACGTGAGCTGTTATTCTGCAGGGAAAGAAGACATAGATCTCAATCATA
ATAGTTCGAAAGAAAAAAATGAAGAAGTTGTTTTCAAATATTTCAACACC
AAAAAGGAAGCACTGAAACATTGGAATGATTTACAGGCGTTGGTGGCAAA
GAAAAAAGAAAGAGGAGCCATGCTGGTTGATTGCTTATCAGCTAAGGTTC
TTAAATCAACTGGTTCAGATGACATTGTGGAAAGGTGTAAAAAGGAATCG
ATCGAGAAAGGTTTTTGTGCTGAGGATCAACATGATGAATCGATTTTCCA
AGTTATCTGGCTCATGTATCGATCCATTATGACTACCAGGGACATTGTAA
TCTTCCTCTTAACCATTCTATTGAAATCCATTGCCGATCTACTTAGCGTC
CACTTACAGTTCGTTAAAGGAAGCATCCTCGCCCTTTTAGTATCGACCTT
CGACTCAGAAACACTAGACAAGAACAGTTACGTGCGATTCACATGCAATT
ATTTTTATACTTGTGATACAGACAAGCCTTTAAGTATCGGGAGAGCTTTA
CTGATTTCAGGATGCATTATCAAACTTGTATCAACGGCAGTAAACATGAT
TGATATCTATATTGAACAAAATTTGAATTCTGGTCGAAAGCTTGAAATGA
GAAGGAGTATTTTGAAACACGCCATTAGGCTAGATCAAGCATTTTATGAT
GTCAACTCATCGGGCCATATCAACGAATCAATGCAAGTTAATTCCATTCA
TCGCTTGGCAACAGGGCAGATTCCCAGAGTCATACAAACCATTATTTCTA
TCTTTTTAAACCTGTATTACATTATCAAAATCGATTTCTATCTTGGAGCA
TTCACCATGTTTGTCACGACCTTCAATACAACAGTCTTCGTTAAAAGGTT
CCATAATATGCTCAAAAAGTCATGGAAGTATGAATTAAAATGGGACATGG
CACTTAGAGATGTAAAATCTAAACTGACTGGTAATCGAGTTCTAGTGAAA
ATGTTTGCGAATGAAGATAAATACTTTCGAGAATATGACCAGATATACGA
TGAATGTATGACTAGCTTCCAGTCTAAGTCGATCACATATTGTTTATACA
TTGCTGCTCAACAATTGACTGGATTCGTTACTTTTGCTGTCAGTATTTAC
ATCTTTTTGGATCATTTGACAGAAACTAAACTAACCACAGCTGAAATCAC
CAGCTTCTTCTTCCTGCTACAAACATTTAGTGGGAATGTGCGATCCTTTT
TCTGGCAAGATGAAAACATCAAAGAAAATGTTCGTCATTTGGATAAATTC
ATTCGTTTAAAGAATCAAGTTCCTGGTATGGTTGATGGCGATGAAGTGAT
TGAAGATTTGAAAGGAGAAATTATTTTTGAAGATGTTGATTTCTCCTACC
CTTCTCGTCCTTTGGAACCTGTTTTGAAGAAGTTCAATCTGAAAATACAA
CCCAATAAGATGACAGCTATCGTTGGTGACTCTGGTGCAGGTATGTGATT
AGGGTGATTAGTTTTGTCTTTGCATTCCTCATCACAGCCTTATCATTGAA
ATGAGATCAAAACAATTGCTATTATATCAGAGCAAATCTTACTATATCAT
AATAAAATTATATTTTTGATTGCACCCTTTTTAGTGTTTGAAGTAGTCTC
ACTTGAAAATGGTATCCTGGGAATACCCAGACGGCACACGACGTCAAAAT
AACGTCCATTTGACATTCATAACGTCCAAATAACGTTATTTGAACGTTAA
AACAATGTTGTGTGCTGGGTAATGCCTTTGAATTTCAAAATTTTCAACAA
TCTTATTATCTTTCACTTTTAGGAAAATCTACCATCGCTAAACTCATCAT
GAGAGTTTACGATCCTGATTCTGGTAGAATTACAGTCGATGGTCATGATA
TGAAATCATTGAACATTCCCAAGCTTCATAAAGAGATGGGAATTGTTTCT
CAAAGCCCTGGTCTTATTACAGGAACCTTAGAAGAAAACATCGCTTATGG
TTCGATAAAAGACGTTTGCAGCCGCGAAGACGTCGAAAGAGCAGCGCGAT
TAACTAAGTGTGATTTCATCGATAAATTTCGTTCAGGCTATGACACATAT
GCTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAAAANCATGACTAGCT
TCCAGTCTAAGTCGATCACATATTGTTTATACATTGCTGCTCAACAATTG
ACTGGATTCGTTACTTTTGCTGTCAGTATTTACATCTTTTTGGATCATTT
GACAGAAACTAAACTAACCACAGCTGAAATCACCAGCTTCTTCTTCCTGC
TACAAACATTTAGTGGGAATGTGCGATCCTTTTTCTGGCAAGATGAAAAC
ATCAAAGAAAATGTTCGTCATTTGGATAAATTCATTCGTTTAAAGAATCA
AGTTCCTGGTATGGTTGATGGCGATGAAGTGATTAAAGATTTGAAAGGAG
AAATTATTTTTGAAGATGTTGATTTCTCCTACCCTTCTCGTCCTTTGGAA
CCTGTTTTGAAGAAGTTCAATCTGAAAATACAACCCAATAAGATGACAGC
TATCGTTGGTGACTCTGGTGCAGGTAAGCTTTTTAACCAAAAATCAATTT
ATATTTTAACATTGTCTTCAATTTCAATCAAGCTTGAAC Coding sequence (CDS) from alignment at scaffold_506:102645..106233- >TCONS_00069705 ID=TCONS_00069705|Name=TCONS_00069705|organism=Clytia hemisphaerica|type=CDS|length=4572bp|location=Sequence derived from alignment at scaffold_506:102645..106233- (Clytia hemisphaerica)
GAAAATCTACCATCGCTAAACTCATCATGAGAGTTTACGATCCTGATTCT
GGTAGAATTACAGTCGATGGTCATGATATGAAATCATTGAACATTCCCAA
GCTTCATAAAGAGATGGGAATTGTTTCTCAAAGCCCTGGTCTTATTACAG
GAACCTTAGAAGAAAACATCGCTTATGGTTCGATAAAAGACGTTTGCAGC
CGCGAAGACGTCGAAAGAGCAGCGCGATTAACTAAGTGTGATTTCATCGA
TAAATTTCGTTCAGGCTATGACACATATGCTGGAGGTTCAGGAATGCAGT
TATCTGGTGGACAAAANCATGACTAGATGATACTCGGCGGATCGAAAAGC
AAAGTTGATATAAGAACCAAAAGCAAAGTCGATTTCCGTTTGAAAAGAGT
CGACATCATAGCCCAAGGATCCATTTCTCAAATCAAGTTTACATACGATG
ATGAGAGTATTTGGTGCTATGGGCCCGATCGTGGAACAAAATCCAACCGA
CCAATCATTCTACACGAGGGAGAATATTTAGTTCGAGTCAGCCATGAACG
GCTGTATGATTACGCATGCGCTGGAGCATTGGTTGAGTTCGAAACAAACA
AAGGGCGTGTGTTTCATTACACCCCTGGTAATTCATGGCGTGGATATGCA
ACAGGCTGGGAAAGCGAGACAACAACAGTCAAAGTTGAAAACGGTATGGA
AATCATCAGTTTGGTGATTAAGCGAGGCATTTTAATCGGTATCGAGCAAC
AACCAATAGCTGAGGAAAATAAAGGACAAACTAAACAAAAAGAATGGTAC
GTGAGCTGTTATTCTGCAGGGAAAGAAGACATAGATCTCAATCATAATAG
TTCGAAAGAAAAAAATGAAGAAGTTGTTTTCAAATATTTCAACACCAAAA
AGGAAGCACTGAAACATTGGAATGATTTACAGGCGTTGGTGGCAAAGAAA
AAAGAAAGAGGAGCCATGCTGGTTGATTGCTTATCAGCTAAGGTTCTTAA
ATCAACTGGTTCAGATGACATTGTGGAAAGGTGTAAAAAGGAATCGATCG
AGAAAGGTTTTTGTGCTGAGGATCAACATGATGAATCGATTTTCCAAGTT
ATCTGGCTCATGTATCGATCCATTATGACTACCAGGGACATTGTAATCTT
CCTCTTAACCATTCTATTGAAATCCATTGCCGATCTACTTAGCGTCCACT
TACAGTTCGTTAAAGGAAGCATCCTCGCCCTTTTAGTATCGACCTTCGAC
TCAGAAACACTAGACAAGAACAGTTACGTGCGATTCACATGCAATTATTT
TTATACTTGTGATACAGACAAGCCTTTAAGTATCGGGAGAGCTTTACTGA
TTTCAGGATGCATTATCAAACTTGTATCAACGGCAGTAAACATGATTGAT
ATCTATATTGAACAAAATTTGAATTCTGGTCGAAAGCTTGAAATGAGAAG
GAGTATTTTGAAACACGCCATTAGGCTAGATCAAGCATTTTATGATGTCA
ACTCATCGGGCCATATCAACGAATCAATGCAAGTTAATTCCATTCATCGC
TTGGCAACAGGGCAGATTCCCAGAGTCATACAAACCATTATTTCTATCTT
TTTAAACCTGTATTACATTATCAAAATCGATTTCTATCTTGGAGCATTCA
CCATGTTTGTCACGACCTTCAATACAACAGTCTTCGTTAAAAGGTTCCAT
AATATGCTCAAAAAGTCATGGAAGTATGAATTAAAATGGGACATGGCACT
TAGAGATGTAAAATCTAAACTGACTGGTAATCGAGTTCTAGTGAAAATGT
TTGCGAATGAAGATAAATACTTTCGAGAATATGACCAGATATACGATGAA
TGTATGACTAGCTTCCAGTCTAAGTCGATCACATATTGTTTATACATTGC
TGCTCAACAATTGACTGGATTCGTTACTTTTGCTGTCAGTATTTACATCT
TTTTGGATCATTTGACAGAAACTAAACTAACCACAGCTGAAATCACCAGC
TTCTTCTTCCTGCTACAAACATTTAGTGGGAATGTGCGATCCTTTTTCTG
GCAAGATGAAAACATCAAAGAAAATGTTCGTCATTTGGATAAATTCATTC
GTTTAAAGAATCAAGTTCCTGGTATGGTTGATGGCGATGAAGTGATTGAA
GATTTGAAAGGAGAAATTATTTTTGAAGATGTTGATTTCTCCTACCCTTC
TCGTCCTTTGGAACCTGTTTTGAAGAAGTTCAATCTGAAAATACAACCCA
ATAAGATGACAGCTATCGTTGGTGACTCTGGTGCAGGAAAATCTACCATC
GCTAAACTCATCATGAGAGTTTACGATCCTGATTCTGGTAGAATTACAGT
CGATGGTCATGATATGAAATCATTGAACATTCCCAAGCTTCATAAAGAGA
TGGGAATTGTTTCTCAAAGCCCTGGTCTTATTACAGGAACCTTAGAAGAA
AACATCGCTTATGGTTCGATAAAAGACGTTTGCAGCCGCGAAGACGTCGA
AAGAGCAGCGCGATTAACTAAGTGTGATTTCATCGATAAATTTCGTTCAG
GCTATGACACATATGCTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAA
AANCATGACTAGATGATACTCGGCGGATCGAAAAGCAAAGTTGATATAAG
AACCAAAAGCAAAGTCGATTTCCGTTTGAAAAGAGTCGACATCATAGCCC
AAGGATCCATTTCTCAAATCAAGTTTACATACGATGATGAGAGTATTTGG
TGCTATGGGCCCGATCGTGGAACAAAATCCAACCGACCAATCATTCTACA
CGAGGGAGAATATTTAGTTCGAGTCAGCCATGAACGGCTGTATGATTACG
CATGCGCTGGAGCATTGGTTGAGTTCGAAACAAACAAAGGGCGTGTGTTT
CATTACACCCCTGGTAATTCATGGCGTGGATATGCAACAGGCTGGGAAAG
CGAGACAACAACAGTCAAAGTTGAAAACGGTATGGAAATCATCAGTTTGG
TGATTAAGCGAGGCATTTTAATCGGTATCGAGCAACAACCAATAGCTGAG
GAAAATAAAGGACAAACTAAACAAAAAGAATGGTACGTGAGCTGTTATTC
TGCAGGGAAAGAAGACATAGATCTCAATCATAATAGTTCGAAAGAAAAAA
ATGAAGAAGTTGTTTTCAAATATTTCAACACCAAAAAGGAAGCACTGAAA
CATTGGAATGATTTACAGGCGTTGGTGGCAAAGAAAAAAGAAAGAGGAGC
CATGCTGGTTGATTGCTTATCAGCTAAGGTTCTTAAATCAACTGGTTCAG
ATGACATTGTGGAAAGGTGTAAAAAGGAATCGATCGAGAAAGGTTTTTGT
GCTGAGGATCAACATGATGAATCGATTTTCCAAGTTATCTGGCTCATGTA
TCGATCCATTATGACTACCAGGGACATTGTAATCTTCCTCTTAACCATTC
TATTGAAATCCATTGCCGATCTACTTAGCGTCCACTTACAGTTCGTTAAA
GGAAGCATCCTCGCCCTTTTAGTATCGACCTTCGACTCAGAAACACTAGA
CAAGAACAGTTACGTGCGATTCACATGCAATTATTTTTATACTTGTGATA
CAGACAAGCCTTTAAGTATCGGGAGAGCTTTACTGATTTCAGGATGCATT
ATCAAACTTGTATCAACGGCAGTAAACATGATTGATATCTATATTGAACA
AAATTTGAATTCTGGTCGAAAGCTTGAAATGAGAAGGAGTATTTTGAAAC
ACGCCATTAGGCTAGATCAAGCATTTTATGATGTCAACTCATCGGGCCAT
ATCAACGAATCAATGCAAGTTAATTCCATTCATCGCTTGGCAACAGGGCA
GATTCCCAGAGTCATACAAACCATTATTTCTATCTTTTTAAACCTGTATT
ACATTATCAAAATCGATTTCTATCTTGGAGCATTCACCATGTTTGTCACG
ACCTTCAATACAACAGTCTTCGTTAAAAGGTTCCATAATATGCTCAAAAA
GTCATGGAAGTATGAATTAAAATGGGACATGGCACTTAGAGATGTAAAAT
CTAAACTGACTGGTAATCGAGTTCTAGTGAAAATGTTTGCGAATGAAGAT
AAATACTTTCGAGAATATGACCAGATATACGATGAATGTATGACTAGCTT
CCAGTCTAAGTCGATCACATATTGTTTATACATTGCTGCTCAACAATTGA
CTGGATTCGTTACTTTTGCTGTCAGTATTTACATCTTTTTGGATCATTTG
ACAGAAACTAAACTAACCACAGCTGAAATCACCAGCTTCTTCTTCCTGCT
ACAAACATTTAGTGGGAATGTGCGATCCTTTTTCTGGCAAGATGAAAACA
TCAAAGAAAATGTTCGTCATTTGGATAAATTCATTCGTTTAAAGAATCAA
GTTCCTGGTATGGTTGATGGCGATGAAGTGATTGAAGATTTGAAAGGAGA
AATTATTTTTGAAGATGTTGATTTCTCCTACCCTTCTCGTCCTTTGGAAC
CTGTTTTGAAGAAGTTCAATCTGAAAATACAACCCAATAAGATGACAGCT
ATCGTTGGTGACTCTGGTGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069705-exon-scaffold_506-1575043694:105954..106233 | TCONS_00069705-exon-scaffold_506-1575043694:105954..106233 | Clytia hemisphaerica | exon |
| TCONS_00069705-exon-scaffold_506-1575043694:103794..105763 | TCONS_00069705-exon-scaffold_506-1575043694:103794..105763 | Clytia hemisphaerica | exon |
| TCONS_00069705-exon-scaffold_506-1575043694:102645..103461 | TCONS_00069705-exon-scaffold_506-1575043694:102645..103461 | Clytia hemisphaerica | exon |
| TCONS_00069705-exon-scaffold_506-1510915933:105954..106233 | TCONS_00069705-exon-scaffold_506-1510915933:105954..106233 | Clytia hemisphaerica | exon |
| TCONS_00069705-exon-scaffold_506-1510915933:103794..105763 | TCONS_00069705-exon-scaffold_506-1510915933:103794..105763 | Clytia hemisphaerica | exon |
| TCONS_00069705-exon-scaffold_506-1510915933:102645..103461 | TCONS_00069705-exon-scaffold_506-1510915933:102645..103461 | Clytia hemisphaerica | exon |
| TCONS_00069705-exon-scaffold_506-1491911889:105954..106233 | TCONS_00069705-exon-scaffold_506-1491911889:105954..106233 | Clytia hemisphaerica | exon |
| TCONS_00069705-exon-scaffold_506-1491911889:103794..105763 | TCONS_00069705-exon-scaffold_506-1491911889:103794..105763 | Clytia hemisphaerica | exon |
| TCONS_00069705-exon-scaffold_506-1491911889:102645..103461 | TCONS_00069705-exon-scaffold_506-1491911889:102645..103461 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_506 | supercontig | scaffold_506:102645..106233 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006810 | transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0042626 | ATPase activity, coupled to transmembrane movement of substances |
| GO:0016887 | ATPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055085 |
transmembrane transport |
| biological_process |
GO:0006810 |
transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0016887 |
ATPase activity |
| molecular_function |
GO:0042626 |
ATPase activity, coupled to transmembrane movement of substances |
| molecular_function |
GO:0005524 |
ATP binding |
Blast
BLAST of TCONS_00069705 vs. Swiss-Prot (Human)
Match: ABCBA (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 2.841e-31 Identity = 103/411 (25.06%), Postives = 193/411 (46.96%), Query Frame = 3
Query: 1335 LVSTAVNMIDIYIEQNLNSGRKL--EMRRSILKHAIRLDQAFYDVNSSGHINESMQVNS--IHRLATGQIPRVIQT--IISIFLNLYYIIKIDFYLGAXXXXXXXXXXXXXXXXXHNMLKKSWKYELKWDMALRDVKSKLTGNRVLVKMFANEDKYFREYDQIYDECMTSFQSKSITYCLYIAAQQLTGFVTFAVSIYIFLDHLTETKLTTAEITSFF---FLLQTFSGNVRSFFWQDENIKENVRHLDKFIRLKNQVPGMVDGDEVI---EDLKGEIIFEDVDFSYPSRPLEPVLKKFNLKIQPNKMTAIVGDSGAGKSTIAKLIMRVYDPDSGRITVDGHDMKSLNIPKLHKEMGIVSQSPGLITGTLEENIAYGS-IKDVCSREDVERAARLTKC-DFIDKFRSGYDT 2525
L A N I +Y+ Q SG+++ +R S+ +R + AF+D +G + + ++ + R T + ++ S+ +++ + + + A + ++ + L+K K + + GN V+ F E +Y D M + ++ + A L+G + +Y + +T E++SF F + G + SF+ + + + + L + P + + VI + +G + F++V F+YP+RP P+ + F+L I +TA+VG SG+GKST+ L++R+YDP SG I++DGHD++ LN L ++G VSQ P L + ++ ENIAYG+ + E+++R A + FI F G++T
Sbjct: 223 LCGAAANAIRVYLMQT--SGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNL---ATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFY---SELMKGLGAGGRLWELLEREPKLPFNEGVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNT 625
The following BLAST results are available for this feature:
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