XLOC_030089 (gene) - C. hemisphaerica

Overview
NameXLOC_030089
Unique NameXLOC_030089
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_123:363628..370791-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030089 ID=XLOC_030089|Name=XLOC_030089|organism=Clytia hemisphaerica|type=gene|length=7164bp|location=Sequence derived from alignment at scaffold_123:363628..370791- (Clytia hemisphaerica)
CAATGGGGTACAGGTACAGAAATATCAGACAACTGACATGCGAGAGTCTC TTCAACCTCTTATTATATTCTAACCGTTTCCCCTAGTTTCCCTGTTGTTT CCTCTCATTTCCGTCTCGTTTCCCTGCGGTTTCCCCTTGTTTCCTGGGCG TTTCACGTTTTAGTACGTTATTTATTATTTCAATTGATACAGGGATATGA CATTTTCTATATATTAGATTCAAATAACCAAGCAAAAAAAAATCATTAGT GAAATATATTCACTTACTTCTGCTTCCTTAGTTAATAATAATTTAATTTG AAAATAATAATTATGGTTTGATCGTAACCTTTGTTCTGGGTAATTTTTGA AAGGTAAGTAAAACATAATTACATTTCAATTCAAATTTTTTATGCCTTTG TATAGTATTTATTTCTTAAATTAAAGGTTTATTAAGTTAGGGATTTTTAA ATTTTACATTGAAATGGAAACTGTAAGAGACATTCTACATCTCTCCAAAA AATTATCTTGTGTAATTCTTTTAAAAACCTTTTTTAGCTAGCTACCTTAC AATGAGTTATGAAGTATTTGTCAATGAAAGACTCAAGTCAAAATCTGTAA GTTTCAAATTCTTACATTGTTTTTACAACTTTTAACAGTAAAACATTGTC TAGCTGTCACCTTTTAAAATTTCTATGTTTCTTATCCAGTTATAAAACAC CTTTTTTATACAGTCTTGGAAATACCGTACTCATAAATGTAACATTAAGT CCATATAGTCTACAATTCTAAATTATATTCTTTATAGACTCTAGAATTTT TTTGTATTTTTCAGTACATTCATAAGAATGAGGCGAAGAAGGATATATTG AATGCTCTCAGAGCCTTTGGAGATCTACACCCTGATGAAGATATCTATGG TAATATATTGTCCCCACAAATTTTATATTTAGAAGAAAATACTAATTTTG TGAATTTTCGGATTTTTATATGATACCAAAACAATGATTAACTTTACTTA TTAAAACGCATCAGTAAGTAAGGTAAAGTGCAAATTAAGGCTATTTTAAC AAAATGGAACAAGGTAACCTCTCGATTTTGCTTTATTATGGAGTATTGTT TGATTGGATCGATTCTGCACGATTCTGTCTCTGAGAACAACATACTCTGT TCCATTGTAAACACTCAAGATACCTTATGGTTATTTTCCTTTTCAGTACA CACAGATGGCTCAAGGCGTGATTTGATATGTTTAAAAGGCACAATCCCTG TCAACTATAAAGGTAGGATTATAGATTGTCGAATAAATATATCGCTCTAA ACAAACAAACAGCTTGTTTCTATATTTCCGTTGTGTAGTCCCAGTTTAGA TTCTTCTTTTGTTTGGTCTATGACCATGATTTGANGTTTCTATATTTCCG TTGCGTAGTCCCAGTTTAGATTCTTCTTTTGTTTGGTCTATGACCATGAT TTGATTTTGATAGATGATAGTTCTTAACACTCTTATATTTTTCATTATAG GCAGCACATACAATATACCTATACAAATTTGGCTTTTGAGTAGTCACCCG TTTAATGCGCCATTGGTCTTCGTTCGACCTACAGCAAACATGCTTATCAA ACCAAACAAGCATGTCGATAATTCCGGAAAGGTTTACATGCCATATTTAT CTGAATGGAGAGCAGTAAGTCTCAATTTGATTTTATTTAATTTGAAGCTT TGTTGAGTGATGATTTTTGTCATTTTCGCTATTCTTTTTATATATGTGAT GTATTAAAGTCTCATTTAGCAGCAGTCTAACCTCTACTTAAACTGCAGTT TTTGTATCTGGGTTTTTCAGCAGCAGAGTCGATTAGCTTCAGCTTTATTT AGATCATTATAAACTGAGGGCAATAGTAAATTAGCACTTTTCTGCACTTT ACCGTCCTCGATTTTGAAGTTCAAAACTGCGGGTTATATTCCAAATCGCC CCAATCACTCTTCCGTCCTAAAAAGTGGAAATACATAAACTTACTGATAA CTCCACGAAAACGAATTATCTTGTTTCTGTCTTTTCAGCAAAAATCCGAC ACCTATAGCATGATCAACATGCTGTGCATGATATTTGCTGAATTTTGTCC AGTGTATTCCAAACCAGCCGGCCAAAGAGCACCACCTCAACAACCACGAC CATCAGGATATCCACCAGGCTACCCTGCACCATCTGGTGGTGGTGGTCCT CCTGGTTATCCAACACACAACGCTGGTATGCCACAACCTAACTATCCAAT GCAAAGACCACCAGCTTATCAACCAGCGAATTTACCATCGTATACTCCGT ACCCATCCACCTCGACTCCCTATCCAGCCACTTCCGGCTACCCACAACAG CAGCAGCAACATCACACAACGACCCAAGCTCCTGCTCGTCCACCACCCCC TGCGACCAGGCAGGAGAGTGTCATTAAAGATGAACACTTGAGATTATCGT TGCTATCAACTGCTGAGGATAAATTAAAACGTAGAGTCAAAGAAGTTTTT CAGATGGGGCAGGTAGGAAGCGATTACATTGACTATTTTATAAGAACACA AGGTCTAATCTTCGTGAAAAGACCATAGGAAAAAATTACGATAAGCTTTC TATAATGGTTATGAAAATGCTCATTATAAACTCCTTTCATGCCCTAGAAA ATATGTAAAAGCCCAGCATATTTACTGAGAACGTCTTGAAAAAATGGCTG ATATCGATAGAGATTTTCGTTATCGAATGGTGGTACGTGGGAAATATAAA TGACATAATGGCCCTAGATTGTTAAGTATACAGATATTTTTCACTATAAA TTCACTTTTTGTTATGTGTAGGATGAGTTACAGATTCTGGAAACTAAGAA AAGCGACCTCTCAAAAGGAAACCAAACTTTACAAGATATGGTTAGACGAA TGACTGATGAAAAGGTATAGCGAATTTCATTTGAAACTTCTTTTTTTCTT TGCTTTGAGCTTTTCAATTTTGAACGTCTTTGGTGTTTTTTGGTCAGCCT AAGCTGAGCATTCAAATAGGTAAAATTCAGTTCTTCCATCATCATAAGAC GACAAAAAAAAAATCCGATTTTCCGATATCACTTTTATTTCTAAACTTTC TTCCGATCGGGTTAATTTTTTGGGTACTTTTAGGCTTTTAGCGTGCGTTG TTTTTACAGATCATAATGTAGTTTCAAGATGGCGGCTCAAGCGATAGTCA GATGTGATAAGTCAGTGTAGTACCAAAGTATTTCTAGTGTAAATCTGTTG CAAGCTTCAATTTCTGTCATTTATTTTTTTAACTCGGCAAATCAAACACA TGATTTTCATCAAGGGGATTCTTTTTCTACATCCTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTACTCTGTTTCAGTGCATCTCTTAC ATCTGTTAACCCACTTATTAAAGCGATCTAGCTAAGCTCTATTGGCTGAC CTTCCAGCCTCGGCTGGTTTATTCCTATTGAATTTCATCCAATTTCAAGA AAGATTATGGTGTAACATAGTTTGCACCCCCTTTTCAATAGAATGGGATG TCAACTTTTTGGAGGTACCAATATTTGCCAAAAAAAACCTGGGGGGAAAT GAAATGTAGGGGGAGGGTCGAATAAGAAAGGGGTGTTTTGAAATCTTTGG TCAATCTTTTAATCCTATATACTAATGGTCACATTGCGACCATTGTGTAT ATATATTGTGAAATTATTGACTCGTGACTGTATATACTTTGTACACGTTT GTACACGTTTTCATCATTTTGGGGGTACATTGAGAAAGTTTCCTTCGAAA TGGATTTTCTATAAAAAGGGGGTAAGATTTCATTACAGAAGGGAGGGATG GGTAAAAGGGGGGGGTAAAACCTTGGGAGGTTCATACCCCTCTGCAAACT ATGTGTAATGACTTTCTTTGTCTTGCTTTCAAGATTTACTCTTTTTATTT TAGGGAAACCTAGATTCTAATGTCACAATATTAGAAGAGAAAAATCGTGA TTTGGAAAACATGTTGGAAAAATTGGAAAAAGATTCTGAAAATATGAATA TTGATGAAACAGTCATCACAATTGCACCGTTGTATAACCAGTGAGTCTCT TCCTTCTTTTGGATCCATGCCATTTATAGTACTATTGCCATAAAACAGAA TCATTGAGAACATAGTACAGGGTGTCTGGAAAAAAAGTATCGAGTCGTAC CGCTTCTATAGGAAGAAAGTTCTTGTGTGTTTCACTAAATTTGCAATATT TATCAAAGTTTCTCTCTGTGTCATATTAATTGTCATGAGACATCTTTTAT GAACAACTTTTACAAAAAACAATTCTCAATTAACTTTAACGTCATGAAAA TTGTAAAGAAAGTTAATTATTTTAATCATACTGACTGATGTAAAACAATC TTTGTGTTGATATAATATTTTCTTACATTTTGTTAAACACACGCAACAAC TCAGAATCATGTTCCCTGACCCTGAACAAGATACTAAATTTCTTTTGGGC AAGTTGAGATGTTTGAGATGTTTCCTATACTGTAACGTGGTACTGCGATT CTGGATTACAGAGATCTCACCCTAATTGATCTCTTTGAAATCATGTTTGT TTTTTCGTTAGGATATTGAAACTGTTTGCTGAAGAAAATGCGATTGAAGA CACTATGTATTATCTAAGTGATGCATTACGAAGAGGAGTGATCGAAAGCG AAATCTTCTTAAAGGTAGGTATTTAGTAATGAATTCGCTGAACTAAAGGA TATTTGCTTTTGATCGTGAACAGTAGGTAAAGAAAACCCCGTTTTGCTGG CTCTCATCTCAATGGGTCACCTTCTAGGGGATTTAACATTCAATTATGCT ATGGTATGGAAAATTGTATTTTTGGAATCGGCAAACTACCTCTCCTAAAA ATAAAGTTCAAGGTCTTGACCGTGTCTGTAGCTCCTACTTAATTGCTGTG ACAACTTTTTCTGCTGGTCGTTTATGGATGGATTAGGAGGTATCTGAGGC TCCTAGACCTTTTATAAAGTCATAACCACGCTTTCTATTTTCTTTCTTCA GACTGTGCGTGATTTATCGAGAAAACAATTCATGTTACGCGCTACTCTCC AGAAAGCGAGAGCTACTGCAGGTCTATCGGGAAATCTACTTGGACATTAG ACGAAGTTACGAAAAATGAAATTGTGTATGGATATATTTACTGTGTAGTA TATTTATAGAGAATCTACGAACGCTTTCGTTATGTTGTAGGGTGAACTAA TATGAGCTCGTCGTCTTTTTGGAGAGGGTCTTTGGTTTTTACAACCTATC CTTCAACTGAGCACATCTTCTTACAGTATTTTCCTTTCTTAAAAAAAAAT GTTTTAACTCACTTTTCACAAGTGAATAAGATTTTTTAAATTAATTGTCA ATATATGTCAACACCCTTCTTTAATTTTGAAAAAAAAAATTACCCTAAAC TATAAAAGATTTTTTTTCTCAGTTTTGTAGCTAAATATTGGTGTAGGTTC AATAGTAGATTTATTCTGACTCTTGCTGAGATTCAGAGTTTAGAATTTCA AAGTATTATTATCATAGCACTGTCATACTGTCAGTGAGACAACTGAATTT TGACTTTTTTTTTAAATCAAAAATATACTTATGTGAAAAAATTTTTATTT TTAATTCTTATCTTTTTAGATTTAGGTACTTTAAAAAATTTGCCTAAATT TAAGCGTTTTTGGTTATTAAAGTATTAGGAAAAGCTCTTCAGTAACCAAC TTTCAGGATTTTTCAATGGCAAACAGTTGTTTTTGTACAAATTATCCTTG AACTATTTTTTTCCGATAAGTTCTCTTTTGTCTTTTGGTTTAGAACCATT TATTTTAATTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047237TCONS_00047237Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047237-proteinTCONS_00047237-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:363628..370791 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TSG101tumor susceptibility gene 101 protein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.16 27.1 53.81 55.44 83.09 64.3 56.79 59.88 45.36 52.2 46.33 33.04 30.42 26.62 26.68 30.82 41.42 38.87 24.8 35.07 37.01 38.27 36.47 39.61 43.38 46.06 47.35 38.78 49.62 45.17