XLOC_030790 (gene) - C. hemisphaerica

Overview
NameXLOC_030790
Unique NameXLOC_030790
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:822738..832518-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030790 ID=XLOC_030790|Name=XLOC_030790|organism=Clytia hemisphaerica|type=gene|length=9781bp|location=Sequence derived from alignment at scaffold_142:822738..832518- (Clytia hemisphaerica)
CAGATATAAAATAAAATTTCACGAAGACGATAAAAATACATATTCGAATT
TGAAGGAAGACTTAACTTGAAGCTTGACAAAATTTTAAAGAAGATACATA
CAACTGAATCTTGAACTACTTAGACAATGGCATATTTACTCAGTATCACG
ATCTTATCATCAATTTTGATTGGTTTTACAAATTCTGCCAGTTGGAGATC
CAAAGAACATCAATATAATTACAGAAGTAAGTCAATTTTTCATCTCGTTG
AACTTTCAGAGCATTCTGGGTTAAAACCGCGGAGATGTCTAAATATTCAT
ATACCCCTGTTTCATTGTTTTAGGATCTCCAATAACTCTAACCGTACTGT
AATCGATTTCTCGTATTTTTTGTCGATGGAATCGACGATTACTCAATCGA
GAATTTAGAATGATACAGGGGTTTTGTCATCAGGTTATAATTTCTTTAGT
GGTGAGAGTTCGGACTTTTCGATGATGAAACATGACACCTTGGGTGTTCA
CATAGCGTGATTGCGTGATCTAAGTTGAATGCACAGAGGAATTTCTGCCT
GAGATTATGAAAACGCAAAATTGAATTTAATCGAATTAAAATTCCAATTC
TTTTCGTAAAATTTAATGATATCGGGTGCTAGGAGAGGAATGTTACATCG
ATCAGTGGGTGAAAGAAAAAAGAATTAACAGTATCTTATGCAAAGGAAAT
TACTTTTTTATGATAAGGAAAAAACTTTATCAAGGACACACTGCGCTTCT
AATTGAATTCCAGTGAGCTAATTTATCTATCAATTTTTCTTTCAAAATGA
CAGAAAATTACACAAAACTGTCAGGATATCATCAACTGTATTTTGCTGGT
CAATTTCCCAGCGTGATCATAGTTTATATCTCAATCACGTGATCAGTTGT
TAAAAGGGTGGTGGTTAAACCTTACCTTACAATGAAGGACTTTTGGTTTC
GAGGGCTTTTAGGTCAATTTACAATAGAAGTCTTTACAAATACCATAATT
CAATTCATGCTAATACCCAAAGTTTATAATCTTTGGAGTTTAAATCGGAG
TTAGAACCTTGTGATTGGGTTGCAATGTCTCGATATAGATTACATGCCTC
AAAATACAATCCTATCTTGGGGCTTTATCTTTAGATGTGGTTAGGGCGAT
AAATGTCAGGGAAAATTAGATTACGAAACTAAAAAATTTGATAGATCCAA
AGTCATTTTAATTGAGAGTTTAACTTAATTAAAAGCTTAATGAAATCAAC
CTAATAAGATAAGTCTAGTTGATCCAATATTGGTCAAAAACATTTTAATT
TACTTCGGTCAACCTTAAGGAGGTCATCGACCCATATAATATCAGTCTGT
CTTTTTTCTGGTCAAATTTTCATTTTTTGGTTAAAACTCAAATATAACCT
ATTCACAACAACTTCCCAAAGTTTCAGGTCATAAAAAGAAGAAGAAGGTT
AAAAATTTTAGTTATAAAGATGCTTACCTAGACAGAAATTGGTCTCCGCC
CGTTTGCGCCCGTATTTCCGCCCAGAGATAAAACAGCTATAATTCTGCTT
CTAGCGCTTCAAGCTGCTTGAAATTTTTTACGGGACGTCTTAAAGTCGCA
AATATTCTTTATGTTAAGTTCAAAAGTAGCTTACGCGTACCGCGATCGAG
TTATAAACATTGTAAATATTCACCGCCCTTGAAATCATTTGAGAGGTGGG
TTGACTGAGAGTAACCTCTGTGCTTTATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCTTATTGGAACAGTGATTTCTAACTTTACCGCATGTT
TTCTCAAAATGTCGAATTTGGTGAAAATTGGCGGTTGCGACATTTTTTCT
CAAGATAGGTTGGGAGTTAAAAGTTGAAACTTGGCAGGATTGCTCCTTGG
ATGAAAGTCTATGAAATGGATGAAAAATTTTTTTCCCTTAGTAACCGTTG
CCATGGTAACTAGGGAAAACATAATTTTCTAGTTTCCATAGCAACCGTTG
CTATGCAGAAAAAGTTTTTTCATTCATTTCATAGAGTTTCATCCAAGTAA
CAATCCTGCCAAGTTTCAACTTCTAATTCTAAAGCTAACTTGAGAAAAAA
TGTCGCAAAGTTTCTATTTTTCCGGGTTGCCGGGGCCGCAGCCCCTAGCA
ACGGGGTGCCATTTTGAAAAAAATTGTCGGAATTTGTTATTTACAGTATA
TACTATCAATTTGGACCAACAAAACTTTAAATAACTTTGCAGAACAGTGT
TTTTCAAAAAAGGGTCTCTAAGGGTCGATGACCTCCTTAAAACGTTTGTT
TGTAGTAATAATACCACGTTTTATCACAAAACCACTCCCCGAACCACATT
ACATTTCTCGTCTTCCCACGTCGTTCTAAAGAACTGCTTCTTTGCAATAA
TATACAAAGCTTGGGCTAAATAAAAAAATAAAAATCGATATCAACACTCT
GAATGGAACTTTTAACAACTTTTGATAATTTTCTACATTGCGTTTTTGCC
CGCCTTAATTAAGTCTTATGAGTTGTGATGTAATATCAGACAAGCAGACT
TGCATAGCAAATGCCGAGCAAATGTCAAATTATATTTCAAATTCCTAAGA
GTAACCTATGATTGCAGAGTCTCGAATATGCCAAATAAGATAATTAATGA
AGCAAAAAGGTGTGGCTTATAGCAAGGTAGTCATTTTTGAAAATTACAAG
GTATCATTAAAAAAGTGATGTGGAACGACTTGTAAGAGACTCCAAGAAAA
TTATCTTTAGAAAGATGCTTTGTCTTGAAGAGCTGTCAAAAGGAAACGTA
GAATTACATCATCGAAAATTATTTCCCCTCCAACACACTGAGCGATCTTT
ACAATAAGTTAATTTAAAACACATCACTGCTCAATATCCGAACCTACCTA
CAACCTCCGTGTAGTTACTCAGCATTTAATGGCAAACGCGCTTCCTTAAG
CTCCATGAGAGTAGGAAATGCATAAAGAGAAAATATTTCCACAGCATGAC
AGCGAAACTTTGAAATAAGATTAACTCTTTTATTTTTGCTGAGTTTTGGA
TATTTTGCTTGTTAGCTGAGAAAAGTTTAGGACACGTAGTAACGACCATA
TGACCTTGTTGGGCTATTTTTAAACAGGAAAAGAATGCTGGGTAATCTGG
GAGATCTTGACGTTAAATTTGCGAAGATGAAGGTCACATGTATCAGCAGT
GACGTCATTCAAAACCCTAACTGTTTATGATTGTAACAGCAAGACCCAGA
AAGTTCGGATACAGTGCTATGACCTCAAAAAACTGCTCAAAAAGTAAGAA
AAAAAGATAGACAAAACAGTGCTCTGTCGTGTTTGTCAGTTTGTGGTACT
ACTTTTCCTGAGAAAATTGACTGAAAGCTGTGAATTATCGCAACCGTACC
TTAAAAGGATAGAAATAAAAAAATCAACTTTTTGCATTGTGATGACGTCA
ATAAAGACTTAGAAACATGACATTAAAGGATTTATACTGAAAATCATCTC
TGATGAAAGACCGATTTCAATCTTGCAATCAAAATACTTTTTTCGACTGA
AATTTTCGGCGAGTTGACGTTAATGAATAGCTGGAGAATTAGGCCTCATT
ACAAACGATTAATTTTTTAACATCATTAAAGGAAAGCGGCGAAACATATA
ACAATAGTGTATGCGTGATCAGTGTTGGCAATCAAGTTGCTCCCGAATTC
CTTAAAGCCCCTCCTCGCACAGGAAAACCATAAAGGCTAACCTTTTACTT
TTACAATGAACCCTTACATATCCAAGGCAGGCTCCCTATGTGATTTTGAG
AACCTTGTGGTATATGCTTCCATAGAATGCTAATACAATTTTTACTTTTA
AAATTGAATTTCAATATTAATCCAAGCCTAGATATATCAATGAAGGAACA
TGAAAAATCTCTGTGTAAGTAAAGTAATTTACATGAGTAAGATGACGCAG
TCGAAAGATAGGTGTCGATGTAACGACTTGCCGATAATGAAGTGGCAAGT
TAATCTTTTCAAAAAAATGATCTACTGAATAGAGAAAGAAAATGAAAAAT
ATGTGAAGTTACGTGGTGTTACTACTCTTCTTGGAGTTCTAACCTGTTCA
AGAGTTCATCTATGTACCTAGAAAAGCTTTTAAGGATACCAAAGTTCTCT
CAAACTTTCTTCAAGTGTCCAAACTTAAACTTAAACTTCAGAATTTCCCA
GGAATAAGGTGATTCAGGATGACTGCAGAAAATTCCCAGGCAATGAATGA
CTCATTGCTTAACCTGTGAGAAGTTAAAGTAATCAATTTCTAATCAGGAC
CTCTTCACATGAAATAATCACATTAATATAAATTCTTATCAATTGTATTT
TAAAACCATCCAATCAAAAAGCACTTAGAACAATATTTTTTATACCACAC
AAAGTCGTTTTTGGTTTTTGATGCTAGGAGTGGCGGCTAGTTCCTCTTTT
GGCAATAATTCAAAGTCACGAAAACTCAATATTAGTTCTGCGTCTTAGTT
ATGCTTTCCTCGAGACTAAAATGTTTCCTCAAGATATTCGAGACTAAGAT
GTCTCCAGAAATTAATTAGAGGTCAAGTAGGATAATTGCTGTTGTCTCTT
CCGATAATGCAACACGATGCACATGGTCAGGTCAAAGAGAAACATATTAC
ATTACTTAATATTCGCTTAAGGTAGTCTGAATCGTAGACCTCTATGGATA
TACTTCCTGTAAAAGAAACTCTTTTCGCTAGAGGATAAGCAGGCCTACGA
TCGAGGTTAACAGCGTCAGCTGGATAAAAAAGCCTATATGCTGATGAAGT
CACGACAAAAGATGACGAAATTTCTACTTAAGCAGTAGGCCTAAATAGAG
TTATTTAAAACACCATCCCCTCTAGTTTAGAAGAGCGGAACTCCTTGGTA
TAATTGGACATTCTAGCTAACTATGACGTCACCTTAAAGAAAATCGATGA
TCACTTAAATCTAGAAGGAGACTCGGAAACGCTCAATTAAGGTCATTAAT
TCAGACCTCACTTAATCTTCCGCCTTTCGGTATCAGCGAGCGGAAAGCGG
AACGTCACCGGATTCCTATTGAAGGAATTTATGAGGGATTGATGAGATGA
ACCTTCAGGCGATATATGACGTCATAGACTTCGAGGCTTAAATTCCTTAT
ATTGTTAAGTCAACAAACATAGGCTGGATGATTCTTTTGGTTGATTCAGA
TCACCAGAGGTGTTTTCATTCATAATAATGTTACAAATTATTTGAATTTT
TGGAAAATTACTCACTGGGAGCTTTTTAATGACTTAACGACTAGTTAGCT
CGAAATTTCTTGGCAAGTTTAAGTTAGAAAAGGCGCTTAGCCGTCTATAT
CGAGATGATCCGCCAACCTCAAAATGCTTTATTCAGATTTATTTGCCTAG
AAAGGGAACTTTTGATTCAGTCTCAGCAGCAAGTATCGCGTACATAAATT
CTCATTAGACCTTATGAGAGTCTAAGTGTCAAGCATCACAAAATCTCAAT
CTAAGCTTCGAGATGATCTTCCTATACCCGTCCCTTCTATCAAAACTAGT
GATTAAATCCATAATAAAGATACTTGAAAACTTAATCTAGCCATGGGAAC
TTTATTGAATTTTCAATTATTAAGCATTTTGTTTACAAGATCCATCAGTA
TTAGTAAAGCTTAAATAAAAGAGACTTAGACTTAAGTCTCACTAATATTC
AATCATATTATCAAGACCCTTTTATATCGAGTGCTTAAAATGAGTCTAAT
AGGCAATAGAGGCAATGAACAAAATAATCTTATAAGAACTTCAAACAAGA
TATAAAATATCTGAACCGGAAATTAGGCGTCATAAACAGCAAGATTGAAA
CATCGGGTCACAAAAAATATATTACGCGTTAATCGATTTGGCAGTTTTTT
ATATATTCGATACCATGTTTTACAGACAGAATTAACGTTTCTGTCTATCG
TTAGTACATAAGATTCTTATGAAGGAGTGCCAAGGAAAAGTTAATGAAAA
TCGGCTTAAACCCATTAAAATGAGCTGAAATGGAAAAAAGAATCCATGAG
AAATTCCTAAATTAAGGTTTGGTATACACGTTCAAGGGATTATCAAGCTA
TAAATAATCACTTAAATTGTTGTGTTTTCCTACTTATAAAAATGCAGCTT
AAACCTTTAAATATAAAAGGCCCTAACAACAAATACCCTGTTGTGGAGAT
TGGTCATGTTTTCTGATGTCATACGAGTTGTTGTTGTTTCGAAAATTCTA
CTCGAATCAATGCCACAGTGGACAAAAGTCACTAAAAAATGTCCGGTGTA
CAGGAAGAGTAATGAAATCCAAATTGAGCTTTTACCTAATTGTAGTTAAC
GATCATGCAATCACGCTAAACACCCAGACAGTTTTTCATGACCCCTCCCC
CATAGTAGACCTTAAATTCACAAAATCATGTTTTTTTTATCTCATAAAGA
GGAACCAACAATCCTTTTGATTTTTATTTTTTGCAATATATTTCGATCAT
TTTTAAGATCATCATCAGGCTAAAAATTAGAATAAAAAAACAAGATTAAA
ATCTAGAGTAAAAACATCATATACATCTCATACTACAACTACACATAACC
TACTGTAAAGAGAAAAAAAAAATTAATTGAAAAAATTCGATTGAAAACAA
AAACCTACAAAACCTAATTAAATGAGAGCTAATTCTCAAGTGACAAAAAA
AAATCAAAATAGTTTTATGACCAATTCATGGCTTTTGTATTCGTCTCTCG
TGTTAATAGAAGGCTTTAATTGTGCAATAAAAAGAGCCTCAAGAGTCAAT
AAGTGAGCNGACATGTTTTTTTTTCTCGAAATTCACGCAAATTTATTTTT
CGAGATTTACGCAATTTTTGTTCACGCAAAGTTTTCACGCATTCAAAGCA
AACCGGGGGTGGCATATTCCCATGATGATTATAGTAAGCCTGTCCAAGTT
TCAAGTTTTCAATGTCTCCACTTTTTTCTTGCAGTGTCGGTCATTGAGAA
TGGGGTAACCAACAAATGGATGAAAGGATTTCGTAAGTATTTCTCATAGT
TCAATCAGCCATGGGTTCAATGTAAATCTAAAAGGATATCGAGTTGTGTT
AATGACTAACGTCTTAAATTTCTAATTTCAAAGTAGAGCATTTCTAATTC
GCCACTCGTGTTAACCATAATAGAATATCAGATTTAAGGGCATCATGAAG
TTGATTTGACCATGAGATTTAGGATTAATAATTGAACCTCTGTTATTTAC
AGAACCATGTAAAGACGAAGTGAAGGCTTGCAAAAAATGGAAAAACAATG
GACAACTCAACTGCAATTTGAAAATCATAAAGAAATTCTGTAAAGACAGT
TGCGATGTTTGTCGTAAGTAGATTCTNTATAAAGAAGTTCTGTAAAGACA
GCTGTGGTGTTTGTCGTAAGTAGATTTTCTACCGTTTTTTGAGAACATAA
ACACATGCTCTCAATTGATGAGGTTGATCGTGACAGAAACATTGGAGGGA
CTATTTTCATAATCAGGTTGCACTGTATGAAGTCTGTTTGTAGTCACTTA
TTACTGAAAAAGCACTTCAGAAACTGATATTCTCCTTTCGTACTTCTAGG
CGCTGAGGGGCCACCACTCGATTGCAAAGTTTCCAAACACGGGTGTTGTT
GGGACAACTCTACTGCCGCTACGGGAAAATTCCAACAAGGGTGTCCGGCT
TGCAAAGATCGATATCCGGACGAATGTAAAGCATTTATAAAACAATGCGG
GCGTGAAGATATACGGATCATGTGTCCACAAACATGCGGAGTACCTTGTA
GTGAGTAATCCTTCATCTTCTTCTAGTCAAAGTTTTGAATAGATTCTACT
GTGGACAGAACAAGTAGAAAATCAGGCCTTAAGCTCAGAAAGCATTTGTC
TTAAAATATTTTCCTTTTTTGAGGCTCTTATGAATTAGCTGAATAACAAT
ATCAGAGAAGCATCAGTGAAGTACACGAATTTTTTATAAGAACAAACTAT
ATAAGAACATAAGGCCTCGATGCCCAAAATGTTAAGAACAAGTTGAGAAC
ATTTTAAGGCTTTTTGGACTCAAAAACACCCGTTTTTTCAGGACAATGGG
TAAAAATATAGTCGCAAAATGGTGAAATTAAGAACATTTTTAGGCTTGAA
ACCCAAAAAGTAAAGAAAATCTCAAATCGCTTCAAAAATTTTGGATTTTC
TTATATAAAAAACACGTGTACATGCTACTCCTTCACCAACGGGTCAACTC
CCCCAAAAGACACCAGACAAGCAAAACTAACGGCTATCCTTCTTTACTTT
CTCTTTACAGAAACTTGTGAAGATGACCGCCATCAACATACAATATGCCC
ATTGTACAAAGAACATGGCTTTTGTACCCATTCCCCCATCCTCATGAAGA
AAGTCTGTTCAAGAACATGCGGTTTTTGTCCAAGCTAATTTTCATCTAGG
AGTTTGTATGGACATTTTTATCAAAAATGAGGATAACACTAATGATGAAA
TCCATGGAAATTTTACAAATGGTTGTGGAGATGCAGATTCGACTCAAACT
ATTGGAATCGATAATAGAGAAAAGTTCTTTCTTTGGATGACAAAGAAATT
CGACGCCTCAGCAAAATATGACAAGAAAATTAGTTTAAAAAGAAAATAAT
CGAACTAACAAATTACAATGCTGGGAAATACTGGCTAGTAACTCAAACCT
GATATGTGATCATAAAGGATTTCAGTGTTGTGCTGATTTATGGTAGTTTA
AATGCTTAGTAGCAGTATTTTGATTTAAAAGTAAGCGTTAATATTTTACA
CAAACAACATAATATTTTTATTGTAGAAAACAAAAACATTTAGCGCTTAA
ATCTATAAACTTTTACCCAGAAAAACAAACGTGTATATATGTAGTTTTTG
TTTGTAAATATAACTTGAACCAATGTTAAATATAAGAATCACTATTCATA
AGAATTCCTAATGAGATATTAGCATGGGAGTTTGGAATTACTAGATACTT
TAATCGTATAAATTTTAGCGAGACTAATTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048396TCONS_00048396Clytia hemisphaericatranscript
TCONS_00048395TCONS_00048395Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048396-proteinTCONS_00048396-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:822738..832518 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.79	6.59	6.33	3.47	7.58	6.71	13.13	10.46	12.47	9.78	9.46	12.12	24.99	30.04	10.71	8.53	15.4	18.4	53.58	53.48	32.86	34.65	21.97	23.14	28.07	36.32	39.34	42.6	20.48	21.23