XLOC_030757 (gene) - C. hemisphaerica

Overview
NameXLOC_030757
Unique NameXLOC_030757
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:914951..924014+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030757 ID=XLOC_030757|Name=XLOC_030757|organism=Clytia hemisphaerica|type=gene|length=9064bp|location=Sequence derived from alignment at scaffold_142:914951..924014+ (Clytia hemisphaerica)
GCAAGATGTTCGTTCttctacaaaacatcaaaaCTCGATGTCAAATCAAC CAAACCGGTAACTCTTAATTGTAATCTGGACTATCACAAAATAAAGGGAC GCCTTTAATAATTTCGCGTATTTTTGACGTGTGACGTCTATATTTGATTT CGCGCGTCACTTCTCGACCAGCAATCAAAATATACTTATTGTTAATTTAG TTTTTATTGAGTGCCTGAATGGATATTTGTTTCAAGGAGGCGCTATCCAA TCCGTCTGGCCTAACAATATAGTCATGTACAGTTATAATACAGCATTGTG TCACAGACTCCcgcccactgaaaaatttggccaaaatttcttccacgGTT GGACATATACCCTTCAATTTTCACCCCAGTTTTCAAAAGTTCAATGTAAA AGATTGCACTCCAAAGACATCATCCCAAATGGAATTTTAACCTGAGAaga atataatttctatccccattagggTTTTCATAGAAATCCCTACTGTGGGT CATGAGATAGGGTATGATGAATAATGGATAAATGTTCTTTGATAGCCCAG TATTCTAGGACTTGCAGGCTTTTATTATTGTTTAAAAGATAAGGAAGCTG GGCACTACTTATATATTAGATGGAGTAGTTATAGAAGATTGAACTtcttt aataatattttaaatagCCAGGGCTAACAGAAATATACGAACTTTCAAAC GGAAAAGAAAAAACCTTGTGTTAAACAGTTTCgtcaaaagaaaataatat agGAACAAGAAAATAGACTAACTTCTACCTGAGGTCCTAATTTTCATGAT ACTTTACGATATTTTATCTATCCTACTTACTTTCGAATAATATTCTTTTT CAACGTACAAATGTTGTGATAAAAACACTATATTGGGATTTTACCTGAGT AACATCATTACAGAAATAGCGAGTTTTTGTACTGGAGaaatcgaaggaga cggtataaGCTAAATCAAAGTTGACATGCCGCCAATATCGCcctccactt tgctcgacgacggtaaaagcACCGTCTGTTTAATTAAGGTGATATAGAGC TGTACATcgactatcgactttgtttttcGTCAACTTATTCACTTAATGTC GCGCTTGATATCTTacaatacataaactcgctgatAAGATGAAGAAAGAG GTCGATGTTTTGGTAAAAAAAGGGGACAAaacgttttgattttgacacag CGATAAATTTCGTTTATTGGAAATTGATGAGCTATGTATTCATCATTTAG GTCCAGAGAACATgggaaaaagaacatttttagattgTTTAAGCTCTTGG AACAGCAGGTTGTGTTTATCTGAtaaggaaataatttttttgaaattgtg aaTTATTGATCAACTCGGTGATGTACGTGAATTCTCTTACAGAACACACA AAGTTGATTTGGTCACCCCCTTCGCTAAGCTTTCTATTTGAAAACTGAAG GAGACGAGGGTATTTTCTTGATGAGTTCTTGAACGACCTAAAATGTTATT CATAGCTACTGTACAATGAATTATTTACTCTTTCGAAACAGtcttaaaaa attgaaactcaAACATTATCACCAAACTGTTAGAGAACTTTCTTTACCAA AAATATAATCATTGTCATTTTCCCTTCTCATCAAGTAAATTATTTTCGTT GGATTTCTAGACAAAGTTCAAAGTGAAGGAATAAggtcattgaaaaatat ttatatttggaTGGAACGATAAAATACAATTTATATTATCTTTACAAATA TAGTTGAATTTCGCTAATTCAAACTCGAACGgggggaaaatattttttct tcgaattacagagagcaTTTTACTAAGTTTTCTCTTCGACGAGAATGAAT TGGAATTCCAGAAAGATTGAAGACAACACTGTAATAGATTTTTGAATAAA CAAGAGCTCACTGTATAGCAACAAATTCTGCACATTTTGTAATTGTAGAA TTTGAAAAGTTGAATAAATGAGTTTTTATCTCGGTTGACTTCCATTATCA CCTCTTTCAAACAAGACGTTTTCTCGTTAGCACccgaaaaatgccaaaaa catgCCATAATTAAAAGACTATTTTTTTCGGTAAGCTTTCGCACCTAAGC GAAATAATTTGAGGCTATTTATTCAGCTGGTATTATGTTTTCTTTATAAA TATCATTTAAGAAAATTCCTTTCTACAGGATGGTAACTTTTTTCTAGCGA TAAGTTGAAGCAAAACTAATTTCATTTGGGTAATCTAGACTCAAactgtg aagatgaaaagaaattttttttgcgtggaaattattttaatgaatatttt gatttcaaaaaatatgtctAGAAGGGTAGTAGCTCTCACCTTATTCAAGT TGTTTGTATGGGGTTTTATCACTTAGACgtattgtaaaaaaattcaaggt aGCTCGTATGGTACTGTAATAGATAtatcactgggcgaaataagagattt ccaatcctggaagtatcttgaaaatatgaaaaaattaaaatatgatACTT CCATATACATTTGTTATGGAAATTtagaaatctcttatttcgcccagtgc atTATTTTCataactagccataactttcattaaggtgccaccgcagcaaa acgaacacatagagttgaatttgcgttcaaaaggaatgatcttagcccta cagtaattttggttaaaagtgacctctcatctgagacaaaattctttcaa ttgctaacaaatgtgtcaagggagtgatttacagtctacttagagtgaca ttcgtgccttgtcttacacgttttttataagaacaatttcataagaatac gaggctgaaatttggctaaaacctaagaacaaattaagaagaatctgagc ctcagatttcagaaattactgcaAAGTACAGGTTTCCATTCTCCTTTata ttaatattgacatttaagcctgaaaaactcCTGAACTAACCTGAAGATAA TGcacttcatatgttattttactaatgtacacgtttagcaacataactgt tcgatACTTTCAGTAGAGTAATATTTTaaacctatgaagagcgcttaata actatttgtggtataaaaaaggaatttcccagaaaaggaNctatgaagag cgcttaataaatacttgtggtataaaaagggaatttcccagaaaagggaa tttccttagattcattaactctccagggataagaaaaagacaaactgaga tttcaaaataagtaatcagatcaaaataactccggaaaagtctttttgat gatgataaaacaatagagagaccgtaagataagaatgctaccgttaagtg gaactaaaatactgaaaaacgcacAAACGCaaacgcaaaattatgagatg tttgcccaacttctttatgcgtgaagctatgaatgccatcgggagcttta ggctccctgcggtggcaaCAACAAGCTTAAAACTNagctatgaatgccat cggGAGCTTTAGCTTCCCTGCGGTGGCAACAACAAGCTTAAAACTTCAAT AAACTCATTATAAATCTGTGTCTGTCTTTCACTCTTAAGTACAGTTCTTT ACGTATGATTCCGGTAAATTTTACAGTTGACTTTCTCTAACTCGATCAAA AACTTTCTTCGAATTTGAGAAAGGTTCgtattacagagagtaattcaTTA CACAGGAGTGCTAAGGGGACGGATAGAGGGGACCAATTTTTTAATCCGAA TTAATAGAGATTCAAATTAGAGAGGGTCAACTGTACTTCAAATGATATCA AAGACTTTCTACtatcagaaaataaaaacaaagaaagcttGCTTAAACAG GAAAATGGCAAATTGCGCCACCACACAAAATGTTTCACAAATTTTGACCT GTGACGCGGACCAATTCACGCCGTATGTTTTCGACCCTGGCACCCAACTG GCGTTCAAGATTCGTTCTTTGACAATCATCCCAGTATGTGTAACGGGAAT CTGTTTGAATCTTGTTGTTTCTATGGGAATGGCTACGCATCGCCGTATGA GAGATTTATCGCTCAATAAATTTCTATTGACCTTGACAACTGTTGatttc atgatatcaatgatagtACTGCCTGTATATATCCATTACAACATTTTGCT ATCCGAAGGACATTTTTGCTGTATCGTTGGAAACGTATTACTGAGTACAG CATCTTCCCTCACAATGATGTCTATAACTTCTATTGTATTCATCAATATT CAACTCTATTTGGCGATCCTTAAACCGTTCATCTACAGTAGGAAGTTTAA CCAGAAATTCACATTACCGATCTTAGTGTCCATCAATGTGTTTTGGGCGT TATCCACAATCACAGCTCTTTTTGTCATTCCTACATGGTGGTCGACATTT CGAACATCGGCCAGTGGATTTGGTTTCTTAtgctatattttgattttatt tctaCATTATTTCATTTGTAAGGAAAGCCGTCATATCCGGGAACGTTCGA AAAGCAATACAACACTTTCGTGCAATAAGATAACAAAGAAAACTTTACGG CTGACGACTTCTGTTTTGATTTCATTCGGGCTATGTTATCTCCCGTATAT CGTAATGTCCGTATACACCATGGTAGTACCTATTACACCTGAATTTAACA CTTATTTTGACACCTGGGCTGAATATATTGCTATGATGACATGTGTTTTG AACCCTATTTTATACTGTATTCGATTGGGATCTGTGAGAAGAAGTGTTTT GAGATTATTTGGATGTGGgcgtgttatgaatttgaggtCGTTCAGTATGA ATACTTTCTCTGTGAAAGAGACTGGACCCAACAATACAACCACGTGAGGA AAATGTATTCTGTGAAGAAAATGTATTCTTAAGAATCAAATACACAATTC ATTCAGGCGATAAATTCAAAGTTGGATAAATTGTACGAAAAAGTACTTGA AAGCTAATGGTACTACTTTAGAAAAAGTTATATCATGAAAAACCCATCAG TTTTCGCATTTTTACAGCTAAGGAAAGCTACTTACCCATAATaatttatg atgtttttaattctACTAATCTAATCTCACTAGAAATAAATATCCTAAGA TAACGAACTCCAATCTTCGCAATTTCCCTCagaaatattttaaagaatac acgctttttttttataagaatggtgtaaatgcatttcatcatggatattc ttaacttttttgggaaaatcatcctaaaatattcttatagcaCATTCTta aggttaggatcctaatttatactagatttaacatttagttcatacgtctc aagcataaaatggcacttttgtaaaaggagtgagccttacttggggataa ttgataatttataatgaaaatgctcttaaaatgactttcttagctttagt agcaaaattcaatgatggtgatattcttagcatattcttagttttttggc cattttcatcatagacattcttataaagtgtattcttatgaaaaaagcgt gtaagatGATAGGTGAGCACTCttaattttcaaagtttaaatcAGGTTAA TTTTACGTTGCGTTTTTGTTGAACTACCAGGTATCTTGAAAAAACACAAA AGAGAATAGTATTCTGATAAAAAAGATATACTAAGATATTTAAAGATATG TTAATGAAATAATATGATATCAAAGATCAGGCCAGTGAGAGAGAACGCTA CTCAAACTGTTTCCTTTCTTTCTCTAGAGTAAACTTCTCTCCCTAAGCAT CGGTAAACTGTTACACATTGTTTATGCTTTACTGTTCGAAAGAGATTATC GATAATCAGGACCAATGAGCTCTTGTAACAGCTTTCTTATTGGTCCTAAA ATGTGGAAGTTTTTGCGTCTAAACTAACGGGAGGTCGTTATTGTGACCCA AGCAGttattacccatgattcatctCGACCGTAAAATGAATGGATGTCCA ATTGACTTTGCTTTCCTTTGTACTTCAGGAAGGATAAACTTTTCCAtaaa cacacccctgtctcacagccccactggaactTTCTTCCTATTGAAATtcc gatggggatagaaattatatcgttcctaggttaaaaaatccagtggagaT GGGTTTTGAgtgtaattttttaaacattcattttcgaatggggatgaaaa agtcattttcccagtggggctgaaatttttgtcaaattttccagtggggc tggggtcctagtgggtctgtgacacaggggtgtataaacCTTTGAGCACG TTAACGGTAACACATCGTAAAcaagttaacttttattttgaggGAGGATA GATTTTGCAACGAGTACTGGTAAACTGTAACACATTGAAAATgagttaat ttttattttgagggAGGATAGATTTTGCAACGAGTACTGGTAAACTGTAA CACATTGAAAATgagttaatttttattttgagggAGGATAGATTTTGCAA CAAGTACTGGTAAACTGTAACACATTGAAAACaagttaatttttattttg agggAGGATAGATTTTGCAACAAGTACTGGTAAACTGTTGCACATTGAAA ATgagttaatttttattttgagggAGGATAGATTTTGCAACAAGTACTGG TAAACTGTAACACATTGAAAATgagttaatttttattttggagGGAGGAT AGATTTTGCAACAAGTACTGGTAAACTGTAACACATTGAAAATgagttaa tttttattttgagggAGGATATATTTTGCAACAAGTACTGGTAAACTGTA ACACATTGAAAATgagttaatttttattttgagggAGGATAGATTTTGCA ACGAGTACTGGTAAACTGTAACACATTGAAAATgagttaatttttatttt gagggAGGATAGATTTTGCAACGAGTACTGGTAAACTGTAACACATTGAA AATgagttaatttttattttgagggAGGATAGATTTTGCAACAAGTACTG GTAAACTGTAACACATTGAAAATgagttaatttttattttgagggAGGAT AGATTTTGCAACAAGTACTGGTAAACTGTAACACATTGAAAACaagttaa tttttattttgagggAGGATAGATTTTGCAACAAGTACTGGTAAACTGTT GCACATTGAAAATgagttaatttttatttttagggaGGATAGATTTTGCA ACAAGTACTGGTAAACTGTAACACATTGAAAACaagttaatttttatttt gagggAGGATAGATTTTACAACAAGTACTGGTAAACTGTTGCACATTGAA AATgagttaatttttatttttagggaGGATAGATTTTGCAACAAGTACTG GTAAACTGTAACACATTGAAAACaagttaatttttattttgagggAGGAT AGATTTTGCAACGAGTACTGGTAAACTGTTGCACATTGAAAACaagttaa tttttattttgagggAGGATAGATTTTGCAACAAGTACTGGTAAACTGTT GCACATTGAAAACaagttaatttttatttttagggaGGATATATTTTGCA ACAAGTGCTGGTAAACTGTAACACATTGAAAATgagttaatttttatttt tagggaGGATAGATTTTGCAACAAGTACTGGTAAACTGTTACACATTGAA CAACATATGAAAGAATATGGCTCCACCATCATCGAACCTCGTGAAATTCT GGTTATTGTGCAAATTGAAAGTATAATAGAACCTATAGCCTTTTGAGTTA TATTCTCATCGCTAAGTTTATAACGTCCATTAAACCTAAACCGCCAAAAC AAACTCGTAGTCAGACCAGAGTCAAGTAaaactaaatagaaaaaaatcac aGCATTGAGACGAAATCTTTCAGTAGAACCTAGAATATAATTTaccatat tttcatttttcacttcCTTAGACAAAGGACAACTGGGTTTGAAATATAAT CCGCTTTTCACAGCCACAACAGAAGAAGATATCAGCCTGAAAGGTAAGGC TCTTCAGGATTTAAAATGCATGATTACAATATCGCATTTTCGGTACTTTT AGTCTGGTAGTTATCAATTATGATGGTTCATTGACTGTGATAAGTCATAC CTGAAGATTTCAAGAATACTAAAggccaaaaacaaaatttcattcattCG TCATTTATACCCTATTCTTTTAGAGAGTATTGAGCTCCAAAGCACATACC GAGACCCTCATCAACCCAAACatcagaaaaacaaaaagaagccATTGGTC AGAACCACTACATGGAGGTCTGCCAGGCGGATTGCAGTTACCACAACCAA AGCTCCACCAAAGACAGCAAATGTACTTTTAAGAAGACAAGCTTCAAATC TCGCTCCATAAAAAGTGAAAGGAAATTAAGTGGCACAGTGAAGCACGCAT CATTAGTTATACTGCGATGATGTTTACGTACcattagaaaagaaaatcat tatCCACCACTTTAAACCAGACAATACCACTGAACCAGTATGACAATTGA TGCTAAAGCAATTATATAGGAGAACAGAGATTGAAGATTACATACCtcct aaaaataaatatacccaaattcaaatttgaaaacgtgACGAGTTTGCGTG AGGAGATGGAAGCAATTGATGTCTTTTAAGAAAAAGGGATACCATatgtt ttaaacaaaacaataaGTTTCAGCTTCTGCAATACTGGTGAAAAGGAGAA TGTAAACAAGGAGAATTTTCATTCTGATGAAGAAAAAGCAAAGGAACAAA CAGTAACAACTTCAAGTCAGCAAAATCAGGAAAGCATTTGCCGGACCCAT GTTTAGATGTGTTTCTAATTTGTCAAGTTACGTaatatccgccattatgg aagcaaaagTTCGATCAGCGGAAGTGATCGCCACTACAGATTTGAAAACc tgtttccataatggtggaagtCACGAAACTTAAGGAAACATGAAAACCTA TATAGCGTGTTAATGCTTATTGACTTGAAGGACACGATGATATATGCTAC TTGGTCAACATTAAGGGACAAAAACCTACATGATTCAATGTGGTTTTATC AAGTATATACAATCAAAActtatcaaaatatttacagATTCTTCattaca ataaaataaaaataatgcattaacttaagtacacgttttttataagaaca aactatgtaaaaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048329TCONS_00048329Clytia hemisphaericatranscript
TCONS_00048330TCONS_00048330Clytia hemisphaericatranscript
TCONS_00048331TCONS_00048331Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048329-proteinTCONS_00048329-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:914951..924014 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.15 0 0 0 0.04 0 0 0.64 0.23 0 0 0.22 0.24 2.94 2.5 0.23 0.22 0.05 0.14 0.05 0.31 0 0 0 0