XLOC_030867 (gene) - C. hemisphaerica

Overview
NameXLOC_030867
Unique NameXLOC_030867
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_143:316774..326892-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030867 ID=XLOC_030867|Name=XLOC_030867|organism=Clytia hemisphaerica|type=gene|length=10119bp|location=Sequence derived from alignment at scaffold_143:316774..326892- (Clytia hemisphaerica)
GAAATTTGCAGATTTGAAATCAGCGAGGGTTCAAATTAGACTTGATTTGA TTTACACGTAAACTGCTACTGATTTTCAAGACATCTCAAGAGCTTTCAAA AGTGAGTTTTTTTTCTGTTATCAAATTCTGACTTCACAAAAAAATTTTCA AATACATTTTTTCATAACGAACCCTAAAGACTGCTCATAAGAATTTTCTT GTCTTTCTCTTTATAACGTTATTTACAAGAACTCTAGAAACCCTTGACCA GATTTATGATGTTGAAAGTTGAGAAACAAAGGAGATCTCTCAGATTGCCT TATGGAATACATATATCAACCCTTCGCGGCGCGGTCGGCTTTTGACGATG TGATGATGGATGTGCCGTTGGGAGGGAGGTATTACATACAAACATTGTCA GCTTGCATAAGCAAGTGCACCCTTTTTACACATTTCAAATACATACAAGT TTCGACCCACTTTTCCTTTTACTTGAATCGTGAAATTAGTTCCACGGTTT GCGCCGTATTTGAATCAATCACTTGAATACGAGGAAGACTGATTATATCA ATGCATACCAAAACTGCTCTTTCTTGCTAGGTTAGGGCTTATTCGAGCTA ATTCTAGCCTATGAGATCAGATGTTAGAATGTTGGTATAAAACTCTCGTT AAACTCGGTTAGTTTATTCTCCATCAATAAACGTCCTGCAGATTAATGAA AAAAATATTTATAGAAAAAGAAGAAAAAATTTAGGTTGATTTAGTTTAAT AGCCTCTCCTCCTCATTAGGACCCTCTTGGTGGTATGAACGATTTTAAGG ATAAGAAATTTTTATTTGACCCCTTACCAATATGAATTGATGTAAATATA TAAAAATATTAAATGTGTTCAGAGATTATTAAAAAGTAACTTAAAACTGA TCCCCTTTTTCAATGAATGAATGAAGGAAGGTTTTGAAGGGAGTTTAAAT GAAGCAACAAATGCAATGAAGAATATGGAGAGTCAATATTTTGATGACAA TTTTCTTTCACCGAAGTTATACACACATCTTGGTACTCTTTTTTTTTGTA ATTATGCGTAAATCCGATCAATCGCGATAGTCGGCTTCGATTTCCCGATC TTTCTGGTTTGATTTCCCGATTTCTTTTGCGTTTGCGCTCGCACTTACTA CTCTTCTAAACTTTATGTTAGATATATTAAGAAAGACTGACCCATGACAA TCACCGGAGTTTGCAGCAGTCATGCATTACGGCTGTTTTATTTCATTTAT TCGGTAATTTTTGTTCACGAGGGGAAGGGGGACTCTTCAAAAAAAAAAAC ATTCAATTTGACCGGTTGGAACCAAATATAAATTGACATTTTTAATGAAA ATATCTATGGCCTCTTGGACAACTGATGAAATAATTGTTTTTTGATAATA CCGACGCTAGCATGACAGGAAAAAGTTGCTCTCTGGGATAATTATCACTC GGAAAGTTGCCCCTCACCCGAGACGATTGCCTCGCGGACAGTTATCCCGG GACGATTACCCCCTAGGATAACTGTCCCCGAAACTCAGCTCACCGACACC GTTATATTTTCCGTTCACCGATAAACGCACGAATTTAAACTTTTTACTGA TAAGACGAGAAAAACAATTCCTAAACCGACAATAAGGCGGAAACCGACTA CCACTTTTCCATACGCCCATTTCACCAAGTGTTGGAGGGCGGACAACTTT AAGTGTCAAAGGTCTATAGGGGACCATATTGGTACCAGAAAATTTCTCGA TTTTCACAAATTTCAGCCCTTTTCGCGAAAGTAAATGTCTTTGAAAAGGG AAATCCGCGAAAGATTATTGTTAGCGAAAATTTCTTGACAAAATAGAAAA TCTGTAAAACTTCTAATTTAAATTAAAATGAACAAAACCAATTCAATTTT CAAAAAATTTTATAAATAATTTAAAGTCGAATCTCGCTAATTCGAACTAG TTCGGGGGAATCTTACTTGTTCGAATTACAGAGAGATTCGGATTATAGAA AGTATTTTAAGAGGGTTTCTCCTTGACAGGAAGTGAAAACAAGATTTGAA TAAGCGAGAGTCTACTGTATTCTGCAAAGCTCCATTTATTGTAAAGACTC AAAATAAGCCGAGAACGATCTTCAAATAACACAGTACCAAACAGGGCCAC TACCAACTAGAAAGGCGCCTCAAAATCGTCATCATTTCCATCCTAAATTT TGAAAATACTTAAGACTATTTAGCCTCAGAACCATGTTTTAGGCTGTTAA CAACAGTTTCATTACCAGATCACTGATACAGGGGTGGCAAGGAAGTTCTG ACATAATCCTGTCTTGTGACTGTTCTATGATACTTTGAGGTATGGCGGAT TGANTCTGACATAATCCTGTCTTGTGACTGTTCTATGATACTTTGGGGTA TGGCGGATTGAAAAGTCTTTTGTCTACAATTACAGTTAATTTCCTTCCGA CACACTGATGCTCTGAAAATCTTCAATAATTTGATGACGAAATTTCACCT GACATCACAGCGTCAGATAATACCCCACGGGGAATGCTGATACACCAATG GACAAATCCCATTTGGCACACGACGTTGTTTCAACGTTCATCTAACGTTG TGAATATTAGATGGCCGTTGAAACAACGTTGTGTGCCACCATTGGACAAC TATTATCCTTCTCTCCGTTAGCATAAACACTCAGAGCTTTAGCGTGAGCC GGATCGCCTTCGGATAATATATTCGACGATGTTCAAGCGCTTATAAATCG GCGTTTACTATTGCACTTTTTCAAATCTCTAGTCATTGAAGATTAAAAGT TAGGTCATTTTACATAGAGTCATTCCAGAGCTGATATTTAGTCTAGGATT CTAATTGACTATTCTTCTATTGTGCAATTTGGGCTCAAAAATATCCCTTA ATTTATTATTTTACTAAGAAAACTGTGGAGTATTATTTCATAAAAATTGA AATTGAAATAATATGAAAGAAAAAGATTTCTAATATTTTATATGTGATGT TTTATACAGAATATTTCATTCAAAATATTTTTAAAGCAAAGAAAGTGTGG TTTTATTTCTTGATATTTCTCCTTCTCCTTTCGAATGGTGTACACGCTTT TTTATAAGAACAATTTAGAAAAAACATGACTCTCAATTTTCGCTAAAACT TAAAAACAATCGTAGTCTTTGATTTGCGAAACGACTATAAAAATGTTGAA ATCATGCCCCTTTTACGCTAAAGCACTAATACTAATAGTAGCCATACGAA AAAAGAGAGCATTTAAGTCTCAAAATCACGAGAGAAAAAGAAAAGATCAG CAGAGCCTCCAAAATTTAATAGTTCTTATAAAAAATTGTGAACCCTGAAG GAAACTTTGGTACAGACTCCATTCTCAATCTTCTATAAGAATAAACAAGA AACTCCCGTTCAGAATTTAGAATGAAAATACGTTGGAAGTCTAATTCAAA GTGGTTCAAATTAATGTTCCCTTAATTTTGAAGGATATAAAAGAGAGAAA AAATATCCCTTCACTTTCAGAATTTTTTGTTGATAATTAAACCTAGTCCC CTCATAGTATCTTCATTTAAGGATTTTATACTCCATTCTAAACATAAAGG AAAATTATCCCTTCTAATTCAATATTTTACAAATACATATTATTATTCGC AATAAAAGGGGTTTACAATCGTCCATAGTTTGGAAGAAATAATTTTGCTT TTATTTTATGGAAGAACATTTTTTTCAGTTCTTCTTTTTTTGTCAGGGGC ACAGTAGTGGAAAGAGAAAGTTTGATTTTTAATCCCTTAAATCTGTTTGG GACCCTCAAACTGTGTGTGTACAGTACGTTAATTCTTTTTTGATTCAAGC TCAATGAAAAGAAAATAATGAAAAATCTTATTTTTTGAATCAAATTTTTT CTCCCTATATTATGTAAATGATATTTTCCTCCATTGTTCTTTATTTTGAA AATAATTTTTTTTTGTTTTTTAGGGGAAGAGGCGAAAATGTCAATCTCAA TTGGGGGAGCAGTTTCTAGTTTCAATAAAAGAAACATGTCGGCTCCGTCT CTTTTCCCGCAAGATCCGCGGAGCGCGTTATCACGCGAATGCTTGGAGCG CATCGCTCGCGTCAACAACACAACGGCGGCTTCGTCAAATACGTCACCAA GTCATCGTGTCAAGTTCGCCGCACAAGCACAAAATGATAACAGTAACATC ATTACTATCAATGTATCAGGTAGACGTTACCAAACTTACCTAACAACATT GCAACGTTTCCCGTCCAGCTTACTGGGTGATCCGATGAAGAGGAAAAACT TTTACAATCAAGAAAACAAAGAATACTTCTTCGACCGAAACCGCAAAGCA TTCAGTGGTGTCTTACACTATTATCAAACACATGGAGACGAGATTGAATG CCCGACTGGAGTATCAGAAAAAACCTTCGCACAAGAACTCTTATTTTTCG AACTTTTTGATCAAAAGACGAATGATGTTGATAGTATTATGAGCAGTACT GAATTTCTTGTACCAAAGAATGTAACATTAGCAAAAATCTGGATCTTATT CGAAAAACCGAATTCGTCACCGAGTGCGAGAATATTAGCTGTTTTTTCAA TATCAATCATTCTACTCTCAATAACGGTCTTTTGTTTAGAAACTGTACCC GCATTGAATCCAGACCATCAAGAAGGAAAACACATGTCATCGACCTGGTA TTTACTAAATGTCGTTTGTAACGCCTGGTTTACACTTGAATTTGTGATTC GTTTCGTAGCAGCCCCAAACAAATTAGACTTCATGAAATCAGCAGTTAAT CTCATAGACTTGATTTCCATCCTACCTTTCTATATAAGCGAACTTATTGG TCATGCATCAGATAACTCACTCGCCGTTCTGCGAGTTATCCGAGTTATTC GAGTTATACGAATCTTCAAATTAACTCGCCATTCACGAGGACTTCATATA CTAGCGAACACCATCAAAGCTAGTTTTCAAGAACTGATTATGTTGGTGTT GTTTCTTGCCATAGCTATTATCCTTTTTGCTAGTGCAGTATATTTTGCTG AGTCTGCAGGTGGTCACCCTGACAACAAGTTTCGAAGTATACCTCACAGT TTTTGGTGGGCTGTTATTACCATGACTACCGTTGGTAAGTAGCCTATTTT CAAACATATTGAATGCTACAGGAGGCCGACAAAAGAATCTCTAGAGCTTA AGTTTTTCCGTAAATTTAATACACTTTTTGTCGATTAGGCTCGTCATCAC TTTATTAGCAACTCCCTATAGCCTTTATCTCAACTCTCCATAAAACGAAC GAGTTCGCGTATTCTCTGAGCAGTCGAGTTAAGGGGAGGTTGTAAAATGG AGCTTGCATCGAATGATTTAATTTGAAACTCTGATTTGAAGCTCATCTTT CATATTTGAATCTGACATCCAAGCGATGTATTTCATCCCAAGGGCTGGTA CAAGGTACAAGCAACATAATGTTTTAGACCTCGATAAATTTCCTGAAGTG ACTAAAAGGAAGTTTGAATTTTTGAGAATAAGTATTTCGGTATCAGATAG GGAAAGTTTCAATATTTTGAAAGGATAAAACATTCTGAAAATGCACTAAT ACGGGATTTTACCGGGGGATTCTTTACCTATCTCGTTTTGCTTTTTGCTG TCAGTGAAGTGAATAAATTCTGATAAAATCAACGCTTCTTTNGACCTATC TCGTTTTGCTTTTTTCTGTCAGTGAAGTGAATAAATTCTGATAAAATCAA CGCTTCTTTCAGGTTATGGTGATTTAACGCCGAAGACATTGATTGGACAA ATGGTTGGTACATTATGTGCTATATCCGGTGTTTTGGTTATTGCGTTGCC TGTACCAGTAATCGTTGGTAACTTCGAAAGATATTATAAACTGGTAAGTC ACCCTGGTTTACACGACCATGAATGGAATATCTAAGGCTCAATTCGATAT ATGAACAAATATCACATTTCGACGGATCTTACTTGATACTTTCTCCACTG AAAATCACCCGGTGGGTAAAATTTATCCAAACACTCGTTCAGGGTAACTT CGAGAGATATTCTAAACTCTGGTAAGTTACCCAAGAGGAAACTCTCGATT CGGTATATTATAGAAAGATTATAGTCCCCATATAAAACCCCGGTCTGGAA GCCTTTTGTTTCTTTCCATTGTTTACTACTTGAACTTGCGTTGAGAAATT AGTTTTTGTTGCTCACTTTTTGATCACGTGATTAAATCTTAAACAGATTC CATACTTGGTAAAACGTGATCAAAAGCTGTGCAAAACGATTTTTATCTTT TGATATTAACAAAGGAAAAATCTAACAAAAAGTTAAAACAATAGACTTCC AGACCAGGGTTTTTTATACGTCGTAAGTTTGTACACCTGAAGTGTTTGAG TACATCTCTAAAGAGGCTCGGTCTTCCTGGACCTGAGCAGTTGTCGGGGT TTCGCGGGGTTTACATTTACGAATTGATTATGAATCTATTTTAACTCGCA ATTTCTAGTGCGTGAGCCTATAAATATTTTGCTTGCAACTTGCGAGTCGA GTGACTTACCTGGATCGCTTCGCAATTCTTATACATATACACTATCTTCC CTTTCGGTAGACTCCATGGTAATCATATCCCGATAGAAAAGTAATGGGGA CAAAATCATCCCACGTCTTTGTGCCGAATATAATAAATTTTATATCCCTA ACTGGAATTTGATAGACATTATCATCCCGGTGTGAAAAAAGTTCCCATGT GAAAAAGAGACAGGGGAATTCCATAGAAAGCATAGTGGTCTGAGTATTTA AACTATAATGGTGATAAGACAATCTGCGAGTGATTTTCGGGCCTGGGGGC ACTCGTTTCAAAAACGACCATACGCGCGGTCCAAAATTAGGCCTTTAAAA TCGGAACCTTACAGTGCAGAGAAAGCTTAGGCGAAAAATCAGCCCTGACG GTGCATTTTCTTGAAAATCTTTGAACATTCTCAGACAAAATATAGGGTCA AATTTTCCAAATATTGCACCCTTAGTATGCAGTTTTCTCATTTTAGCTGA TTTCGGCCCTTACAGTGCACTTTGGGAACCTTAGAAAATATACCCTATGG CAGGACATTTACCTTGAGTGTCCCCTCTCCCGGTTTTTCGTGATCTATTT AGCGGACAACCCCATCAGTGTTTCTATAAGGAGTATAAAAAGTGCTGGAA GTTTCTTCAAATATATGGAAAATGTTTTTGTAAGTGCCAGGGCAAATCGC AGCAGAAAATCTTCAAGTTTTTGATCTTGTGGTAATCTACTTAACAGATT GTGAACAACTTTATATAGGTTCATGTTTTTCAACTTTTTCTGATTCATCA ATTTGATGAATTTCGCTTTCTAATAATGAGGAATCTTGTTCAATCCATTT AGTGAGAATATACTAAATGAATATAAAAGGAAGAAAATAGCATAACCCCC GTCGCGGATATCCAGATTCATAAGGTTTGCTTGGATTTTCATAGCTCAGA CAGGGGGTTATTTATAAAAGTTAATGTGAGTTAATAATTTATAAAGCCTT TTTTGAGCTTGTGTACTTTTATTAATTTTCGCAGTTTTACTGAAAAATTG AAAAAAATAGAGAATGAAATAAAATATTCTATCAAAACTGAGGTATTGCA AATTTAAAAACCACAATTTTCTAAAAACAAAAACAGTTAAGAATATCTTT CAATCACACTCTCCAATTTCCAATGAACTTCCCATATTTCGGATTTCGTG ATTAATTTATTTTTTTGTGCGGTTTTCCTTTGCTTCTTTAAAAATATTTA TTTTTAAATTATTGGTTCCAAAGCTCTCACTCTGATATTCTTCTATTTTG AAGTCTAAAACTTTGAATGACTTTAAATCTTTTGAGAAAAATAATATTTA TCGCTGTATGAATTTCCGATAAGATTCAAATATAAGAAATAATCCTAAAA AGAGTAAAAACCTCTCACTAAGAAAATAAATCAACATTTGACATTATCCC CATATCGCTCCAGTTAAGAGAGGGAGAAAGTATTAACTTTGTTTGTTATT GATAAATTTGAAACAATGCACCTCCCCCCGAGGAAAAATTATTCAAAAGT TCCGTTAGGAATGAATGGCCCATGTTGAGGATACGATGCGATATTTTTTC TCTCGAAGGAGCCGAGTGATTAGTTTGGTTCCTTCCGTTACTTTCCCCGA ACTTTGATGAAATTTCTCATCTTGAATATAACACTATAGCAATTGACAAA AGTAAAGAATTCAATCCAACCGAAATTCAGCTTTCTTTGAGCTAAGTAGG TCTCTTATCCTTTGAAATCATTTTCCCTTCCCTACCAATATTTTATTTTG TAATAATCTTAAAATTATAAACATTCCGATTGTCCGCTAATCTCCGAGTT TGGAGCTCCCCTACGGTCTATTCCCTTTGCGGGGCATCGTATATCCCGAT TCGTATTTTTCTGAAACGTTTTATAACTTTATTGTCTAAATCTATTGTTT TCACTCTTAAGGAGCGAAGTCGTCATGCACGTGAAACAGAAGTTATCAGG AAAGAAAAAGAAGAAGAGACATTTGCGGACATGCGCAGATCCATCCAAAT GATGACTCATACGTCAATCATCCTTGCGGGGGGCGTCAAAAGACATTGTC CGAATGGTACTGAACAACAACAAAACAATACACCGAATAACGATAATAAC AATAACGATAAAAAATCCAATCTAATTTATCCGCACAGTCCTAACAAACG AAAAACATTCAAAGAAAGAATTCAAGACAAGTTAGCGTTCACATTTCAAC GCCNACCTCCCCCCGAGGAAAAATTATTCAAAAGTTCCGTTAGGAATGAA TGGCCCATGTTGAGGATACGATGCGATATTTTTTCTCTCGAAGGAGCCGA GTGATTAGTTTGGTTCCTTCCGTTACTTTCCCCGAACTTTGATGAAATTT CTCATCTTGAATATAACACTATAGCAATTGACAAAAGTAAAGAATTCAAT CCAACCGAAATTCAGCTTTCTTTGAGCTAAGTAGGTCTCTTATCCTTTGA AATCATTTTCCCTTCCCTACCAATATTTTATTTTGTAATAATCTTAAAAT TATAAACATTCCGATTGTCCGCTAATCTCCGAGTTTGGAGCTCCCCTACG GTCTATTCCCTTTGCGGGGCATCGTATATCCCGATTTGTATTTTTCTGGA ACGTTTTATAATTTTATTGTCTAAATCTATTGTTTTCACTCTTAAGGAGC GAAGTCGTCATGCACGTGAAACAGAAGTTATCAGGAAAGAAAAAGAAGAA GAGACATTTGCGGACATGCGCAGATCCATCCAAATGATGACTCATACGTC AATCATCCTTGCGGGGGGCGTCAAAAGACATTGTCCGAATGGTACTGAAC AACAACAAAACAATACACCGAATAACGATAATAACAATAACGATAAAAAA TCCAATCTAATTTATCCGCACAGTCCTAACAAACGAAAAACATTCAAAGA AAGAATTCAAGACAAGTTAGCGTTCACATTTCAACGCCCATACAGTGATA TTGAACAATATTCAGACGGGTGTGTGACAACGCCCGATGATGAATACCGC CACAGCTTAGTTGGGGTGGTCGATGATTCTGGTGATATAAACAGATTAAA ATCAAACGGAAACGTATCAATGCGGACTTTACCTGATATCAACATAGACT CACCGCCCTCAAGTACACACCCTTCAGAGTATACTCCCGAAACTTTAGAA AGTCGCCCATCATCAGCTTTAGGTTATAGTGAGGGTTTTTCAACCGGAAA TCGGATAACCAAAGCGAACAAGGGAGAAGCAATTTGGTTTGGAGCTGGAG GGCAAAATGAAGGACCTAGTAAAGAGTCTTCAATTTGATGATCGTCAGAA GGATATTACTTTCTCCGTGGTGAAAACAATATCGATCGTAGATTGAGAAA GAAAGCATTTGGTTCAAATGAAGTAGTATTTCACTAAGTGGTCCTTTTTC AAAGATGTATAATTTCTACTCTGCGTCCTATAGGGGAGTTGGCAAAATTT GAGATTTTGATTCCTTACTGTTTATCCTTAGCTATGGTTGTACTGACAAT GATTTTTCATATTCTGTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048551TCONS_00048551Clytia hemisphaericatranscript
TCONS_00048550TCONS_00048550Clytia hemisphaericatranscript
TCONS_00048549TCONS_00048549Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048549-proteinTCONS_00048549-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:316774..326892 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.02 0.13 0.04 0.35 0.38 0.22 0.2 0.3 0.38 1.41 0.94 0.06 0.03 1.2 2.04 2.18 2.38 3.63 2.43 0.7 1.27 1.63 3.02 0 0 0 0