XLOC_030904 (gene) - C. hemisphaerica

Overview
NameXLOC_030904
Unique NameXLOC_030904
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_144:60411..65255+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030904 ID=XLOC_030904|Name=XLOC_030904|organism=Clytia hemisphaerica|type=gene|length=4845bp|location=Sequence derived from alignment at scaffold_144:60411..65255+ (Clytia hemisphaerica)
TGaaattcgattagttcgatggtTCGACTGACATCGTCTGGCTGGGtaga atttttttagaatttatttctCCGAGAGGACAAAAATCAAAAGTCCAAAT CTCATCTGGATGGATTCTTTCAAACCGAAATATTACTGATCAAAAAATGA AACAGCCCAATGTAAATATCATTCTTGTTGGTGAAATTTAAGTATCTAGA ATATACTTACAATAAAGGGGAGAATATCATACTTGACTTGACCTGCCatc ttgcttcacttttttggatACTTTGTTGTTTAAGCCCTGGGAAATAGTAT CTCGATAGTGAAAGTATGTAAACCCGTGGCAACTTTTTAAATACAAGGGG CagggttttttcaaaaaaaaactaccCGGATGAAAGCTCTGCTTCTGATT GGTTAAAGCTAACATcatactttcgatttcaaattcACGAAGTATACACC AAGCTCAGATCGCAAACTATAATAGCTGTTCCCAATATCATCATTAATAA ATCGCATCTGAGTATGATTGACGATAAGAAAGCAGCGTAGTTGTTGAAGA AGGAGGACTTGAATCAGCGTTCAAGGCAAGGTCTGACAGCGAGTTCATAT TCTATCTTGAAGTTTATCTTTGTTAGAGGTTGTTATACCGTTAAATTTGT GTTGAACCATGTCTTCAGAAAGTGAATTAGTTGATATGGCCAAATTGGCT GAACAAGCCGAAAGGTATGATGATATGGTGCAATTTATGACCCAACTTAC AGAGAAGAACCAAATTCTCACTGATGAACAGAGAAATTTACTCTCTGTCG CATTTAAAAATGTTGTTGGAGCTAGACGATCAGCATGGAGAATCATCAGC AGCATGGAGCAACGATGCATAGAAAAAGGGGAAGGAAATCAAGCCGAATT AGCAAAAAAATACAGGGAAGAAATTGAGAAAGAATTAGAGGTAAAATCTC AATACTAACCTATTTCAGATTTATTATCCCTTTTTTTCACTTGTCCTTGT TACTGTCAACTTTAAGATTTATTGAGCCTTACAACAAGAAAGACCAACAC TTCTATTGTTTTGTTTCAGAGAAAGATTTCTTGACATGTTCTAGTTCTGT ATTTTTCTTGATATACAAAAAGCTATTGTGGATTGACATGACTGTATAAT TTTCTCCTCGATTTCAATGGAAACCAAATAGGTTATATTAATCATTTTTG TCTGTAGCAGGACTGACTGGGCTGGAGGCCTTGTTAGCAATAACAGTTAT GAACCCAACTGATGTCTTGTGGTGCTCCAGTCTAGCTAGAAATATACTTT AATGgagaattaattatttttctaacATTGAATTAAAGAAAGTAAATGTA ACTGAATTATCATCTTGTTTTAGTAAGGGGTCACTCGCATATCGATTTTT CCTGTAACTAACATCATTGTGACGCAAGGGGGTGGGGGGTCAGAGCCtat gacgctaagaaatttcaacAGAATATCGATTTTCAAACCTGTAACATTTT GTATTCCATCCTTCGCTACACCTGCCATCTTAATTCAAACGCATAAAATA TAACAGATGATATCCAATACCCTTCCGTTACGTTTGTAGGAATATGTTAT TATCGATCCCTAATCATAAAAACAGATACCGCAATAAGAAATAGATGGGC CGTATTTTGATATACAAGGGATATACAAGGACCGCGCTGACAAAACAACG AGCCGTTTGTCTGGGGACAAACAATTGTGAAAATCATAAGTCAAAACCAC TTGTTTTAAAACCGTGCGAAACGAAGCACAAAAATCAATGTGGCTGGAAT ATCAATATCTGTaatagagaagaaaaattactttcatcgatttttggtaT ATTTATGTAAATGACGCTAAGaaaggggggtgggggggggttcTTCAGAT AGCATCACAATGACGTTAGTTGCAGGAAAAATCGATATGCGAGTGACCCC TAAGAGACTCGTTTATGCTGTTATAAAACTATGTTTCAGCAATTTTGGTT AAAAGTTCTTTATAGAAAATAATGTTTACAAAAACTATAGGAAATAGGGT TTCAGAAGTGAATTGTTGAAATAAGGCCTCCAAAAATATAGAACAAAGTT TTGATTTCCCCTTAGAtggtttaaagaaaaatgtccataaatattgaaaa aaatattaacagtaatgcggcaatcacaaatatcttcattttgtgtctaa aaagtgagttggtCGGTCAGTCTTTCGGGTTCTCTTAcctccatcatcca tttttggagtgaaTTCTTGAAGAAAGCTGCTAGCCAGCAGCCAAAATAAT GTCATGGGTGGTTTCAATATATGACCTTTGAGCGCTGTGATCTCcaacag tgctgcaaataacagCTGGTGAcgggtaattaccggtcattttTAAGCTA ATATGTGTGTTTTTTTCCTGTGAAATTTTGATGGTTTCATTATTAGTGCT TTCTGATCGAGTAATCACCAGCCAACTTTAAATTCCTTATTCGCATCACT ACTACaacccaaaatggcgcatgaAATTTTTGGACGAAAGAAatgtcatt gacagaaaaagtctgACAACTTTACCAACTCAAcgactcaattttcgaga gttgGCCAGGCGATGCAAAACAAAGCTATATTTGTGATTGACGCCTAATA AAAacttatgaatttttttaaataagatccTGTCGTTTCATGATAATGAT GATGTAACAAGAATATTGTTTGCTTTAAATTAAAGAAATGACTTAAAAGA TTCTCTTACTTTTCTCTTTCAGGCTCGTTGTCAAGAGGTCTTGAAACTTA TCGATGATTCATTATTGAAAACTGTCGACCAAGGAGAACGCCCAGATGAA GCTAAAGTATTCTACCTTAAAATGAAAGGAGATTATTACAGATACTTGGT CGAAGTAAAAGACACATCAAACCCAGAACGTGCGAAACTCGCAGAGCAAT CAAAAGAAGCATACGGCAATGCCACAGAGGCTGCAGAGGGTCTTACAAAC ACTCATCCAATCAAATTGGGATTGGCATTAAATTATTCTGTATTCCATTA CGAGATTATGAATGACGGTACCAAAGCCTGTGAATTGGCAAAGAAAGCAT TTGATGATGCTATTGCTGAATTAGATAGCTTGAAGGAAGATTCTTACAAG GATAGTACCTTAATTATGCAGCTACTTAGAGACAATTTGACCTTGTGGAC ATCAGAGAATAACAAAGATGATGATCAAGACGAGTCGTGAGTCCGCCTTC ATTTACATGTCTGACTATAAACACCAACAATCACCCAGAAGCTCATTCAA CTTTTgatgatattttacaaacacaCCACACCACATCAATTATAATGTGG CTAAGACTTTTGAACTTGTAATTTATCATTTTGCAATGATATCTTCGATC AACTCCATGAAGGATTTACGCTGTTTTCTGATTATGATAGAAtgcaatca aattttgttatatGTATAATTTTGTGCTTTTAGTAGTTTTTATGTGCATC TTTTCACATTGTGCTCAAAAGCACAACTTTTCTCTGTCCCTGGCTGTCCC TagctttttctaaaattaatccAATAATAGATGTTGTCTGGAATCTAATG ACATTATTAGTTTTGTAATTTATTGTTTGATAAATAAGTATACTGAaatt tagtgaatttttaaGTCCCAAGCCATTACTGGTGGTTGCTTGTATTTATA TTATGTATACAAAACACAAACGGGTTGGTCGGTCCAAGCTATTGCTTTTA GTACAAACATCTATGCAGATAATGTATAtgttaaaatgtaaaaatacagT TTCATCCAAGATGTCTCTCCTGTTTAATTTCATCTTGTTTCATTCAGTCG CTTGTGACTTTACTTGGGTTAATTAAtatatcaattttgaaaaaatagag gCTTAAACGTAAAATTAATGTCAACACTCATTTGTCCCAGTACTTCTCTA TTTAAGGGGTTTTAAAAATGAGCATTTGCAGCTTTTCTTGGAATTGCCCC ATTTTTATGTGAGATTGATTCATTagttttcttctgatttttgcaTAAAA ATAAAGGGCGATGTTTTcaaaaagtgactgaaaatttttttttgatcttA AAAATCTGTTTCTCTTTTTGGGTAAATTCCCTTCATcagttttagggaaa atgagcatttctctcGATTGACTTGGTACGTTTTCTGATGTTTTGCAAAC TGATTTTAAATGGTATGGAATCTGAGagagtccgattttcgaaaattttt tttggcaaatttgggccaaaaggTGCCTAAGAATGAGGTTTTCTGAACTT GTGTGAAATTCCTTTTCAAGTTAGTGTTTTATTATatagactctggataa acatcgaatgaaacggtggagaacGATTGTGTTTCAGAATATAATCGGTG TATTGTCCGcgaaggacaactgtcatggcggctcgaagtactctgatttt gaaaaatgactaattactgtttttgcatctttctcgcattttaaaacgtc ataacgacgtataattagtaattaactagatgATGTGTTTGACTCTCGGA GGAGAACTAAAAGCCTCATTTGGGAATTAGgcaagtgtattttgatgaga aatgcaattaaaatgctatgaAGAATCATGTTAATAGTGGAAGgaggtga acaataatgtcattgctgcggacaaggcttgtacatgagaaattggcaaa aatcagcgaGTTGTTTTTCCTGTGTTTATTATAAAATAATTCCTTGGTAG TACTTCAGGTGTACNtagtcattttttcttttgatcatgaaagtatagtc cttgaagagtcagaaaacgtgtgtggcgttatttggatcaggctc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048594TCONS_00048594Clytia hemisphaericatranscript
TCONS_00048595TCONS_00048595Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048594-proteinTCONS_00048594-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_144supercontigscaffold_144:60411..65255 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
933.5 929.74 1121.23 1130.14 1359.4 1018.48 1266.01 1341.73 855.39 918.47 706.64 681.04 708.04 672.2 664.42 668.39 642.36 658.5 612.23 609.84 652.39 638.75 740.7 692.22 470.1 516.47 803.09 766.91 635.34 673.94