XLOC_030909 (gene) - C. hemisphaerica

Overview
NameXLOC_030909
Unique NameXLOC_030909
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_145:9701..16244+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030909 ID=XLOC_030909|Name=XLOC_030909|organism=Clytia hemisphaerica|type=gene|length=6544bp|location=Sequence derived from alignment at scaffold_145:9701..16244+ (Clytia hemisphaerica)
caaaatttaaaattgattgcATTATCAAAAGTCTAGTTATCGCCTTTTTA GATTATGACTTTATTGAAACCATATTGTTTCTTACAATACATATTTTATA ATGACAAGAGCAATCTTTACCCGATATCCCTAAGGAATGttctaaatttt gatctagCACTTTTCCGAATCCTCACGTTAATACGCTTCTTTGAAGCTAT AGATTACTTGGTAAAATCGGTTGAAAGCAGTGCCTGTTAGGCAAAATATG TTTTGCACTTGCTCTAACTCATCTGATTAGATTAACAGCATTGCATAATT CTAGAGTCTTTGTCATATTCTGCAGATATATCTCTGCAGAATATCGCAGC CCTGTTTGTTGGCATAAGCCCCTGTTTTAAACCCAGTAAAACTATGTGTA TTATTCTGTACATCCAATAATCAGTTTTTTAATTGTGACTTGTTTCTTCC TTTTTAGTCTCTGAGAGAGCAAACCATAAAATTAAGAGTTGCCATCTGTC ATTTTGCGGTTTTGCCCAACCAATCGTTGCAAAAGCTGTCATTAGTGACA CACATGGATCAATGACTGGGTTTCCCCAAAGGtaataaaataacaaattt aAATGTATACTTTAGTGCTGATTGTTTGTATTTTTGCACATACCTGGAGg ccctataaattaacctgtgtttgtccgTCCGACTATTACCAACTTTCCTC GGGATCGAATCATaggaattttgtgatttttggtacaaaggttcAAAATG GTNTTTTTTTGCACATACCTGGAGGCCccataaattaacctgtgtttgtc cgTCCGACTATTACCAACTTTCCTCGGGATCGAATCATaggaattttgtg atttttggtacaaaggttcAAAATGGTGATTACCAAAATGTGTCAAAGCC AATTTTGGCCAATTTAGACCCAAAAATGCTCGAAAatagggtttttggac tttgtgaaaaatctgttcattagtttttcctgactTTTTATACAAAGACG TAAAATGAAACTGTGCTAAATATGAGAAAGttcattttgcttttttgttc aactttaaaatttttaaattattcagtttttgtttctacattgccttcat taaatttttattattccttttataaacaggtaggtccataaaagtattgC TTGTTCAGATTGTTATAAATACTCTTATCAGATAAGTTTAAATTTGAACT TTCGATTCGCAAAAATTGTCCCCACAAAGATCATCTTAACCCTAAAGCCC cccttaaaatctcaagattgacaagtCCTATTACCTTTATATTTTGACCA TTGGTAGATATGGGTAATTGAagatgatttacaaaattttggttcggcca cctgtctggttggtattttacagaccagaatgtaaacttGACCAACTGAT TCCTGAAGGCTGATTTGTCAATTTAAAGAGACTATCAACAGAAAAAATTC CTTCCCATgagtatttggtactttgcaCAGACTGGTCTTCTTTCATAAAT GCCTAActaattttcaagtcaatagcattttccAATCACAAGATACATAT CCTAGGGCTACTTATACAAAATACCAACaggtggcaaaaaaatttaccct CAGCCGAAATATACATTTCATGTGGAGTTGCCTCACAGAAAAGCTAGACG GAGATCCTATTTTcggtatttttaaaaatttgttttggtgCTCGAAGGTT TGAGGTTATAATGTTTTCACGATTTGCCCAGTACTTTTCACTGATCCAAT GATAGACATTATGTTGACAGAGCCAGATTTCTATCctttcattttagatt tttgtggTACTTTGCTCCTGAACACTTCTCATCTTACAATGATCTATTGC TCTACGATGATGAAAAAAGAACCTTGGATCAGTTCAGAGAAAATTTCAGT ACGTATAATATCCCTGTATTTATTTCATAGCATAATTTTAAATGGATTAA TAATTTGATCaccttttatttcaaaactttttagttGTTACTGTAGGTAC AAAAATCGCAAGCTATAGAACTTTTAACattataaaaagttttgataaat tttatttcaGTTGGAAAAATGTCAGAAGCCTATGCCACAAAGGACCTTCG TTCCTCTGTAAACTGGCATAACAAAATGATCATTGTTGATCCATCGGTCC TCAAATTCTGCCTTTCTGATGAAGCTAAGGAATATCACATCCATAATTAC GATTGGACTGAGTTTGAGATGATGTTCCCAAGTGGATATAGTTTCGTTAA AGGTACGATATTCAATATAATGTAGAAATATTGACTTTGAATGCACCAGA TGCACTAAAGAATGTGACACAGTTTTTTCAATAGTCCAACTTCTTTAAGT GCCTGCAAGTGCATCAAACCTTTTTGAAacgtttctttttaatttttttt aattataagcaactccaattgaAAGTAAAGaccatcaattttattttatt ttaccaGGCCAATTCAACAAAGGACGTGGCATGATATTGAGGGCCTCTGC TCTAATAGAGATGCTGGTCAGGTCCTTTGACGAACGATCGTTGATACCTG ATGAGGTCAATGAGGTTGTCGAGATATCAAAGACGTCGCTCATGATTGCA TCGCAACTCGTTACCATGTGCTTGCACCAAACAAGTGAGTGTGCAATATA TTATTAGTAATTTGCTGTGAagattgggctgttccattaaatttccattc aagGGGGTTTTAGAAATGTGCTGATATTTTCCCCTGACAAAAAAGCGAAA TTTGCAAACGagcccttggaaaaattcgttTCATTTCTTAGGATTAGATG AACTGAAATCAGTCTTTTCCCccggaaattttagaataaccttATTTACA CCCTGGAAATATTTACAAATACTCCTTTATACCCCAATTCTTCTtggatt accccctggaaatgttcgtccaaccCCCTGTACAGATATAACATTGTTTG ATCGTAGAACATCATTAACATAGTTTCATCCTGGATTTCGAGTCCCCCCT TAAAACAGAAATCACCCCTTAACAATTCACCCCCCCCCTTAAGTCCTACC GATCACTTTGAGATGTCCCTTAAGATTTATTCCTCCTTGATTGATTTTCC CAGACTTTAATGTGTaatcttaggttccaaataaacgcccctccccctgc atgttaatttttcgaacttttttaaagtcaaatttATAGTGTATTTTAAA TTAATCCAAACATAGATGTATTGTCCATATTCACATCTTTAATCAAAAGT TAAACAaccttttgaaatatttgactAAAAGTTAAGATTAGAACAAAATA TTCAGAAGGCTTCCTCAGAAAAGCAGTACTGTACAATTTAATATTATTGA TAGAAGCCAAtgtatgaaagttttttgacaAGTCAAAAAGACAGATTTTG TTGCCAGGTGCAACTCCTAGGATCAGCATCAACACCATCTTTTACTAACG AAGCTATTCTGCTAATGTTTCTTTCTTtagtgaaaaagttttttatcata CTTTACTTTTCTAAATCACCAAATTTAAAACATTAGTATAAAATGATAAA TCGCAGTCAGCTGCCTGACTAAAACAATATACCTGGTATAAAAATCAATA CAATTAACTTCTCTGATATCGTTCTCTCAAACTCATAGCATTTGAGTGAA AATCCAGTTTTAATCCACAttgaacagaaaaatatttcacatcgattgtg ttttgaaaattcgaatCACACAAGATTCAATTAATAAAAATGTAATTGGA GCCTTTGATGCAGTTTAGGATGGTATACACCAAGAAAAAGAGCACTTTTT CCTGCCAACCAAGTTCTTAGCTGAGCCTTTTGATTGAATAaagtttttga acattttgtcgTATTTATGACTGTCTAAGATGGACaattgtctcaaaatc ttgaaaaagtgctttttgaccaatttttcatagaaaagcaGCTGTAATTT TTGATGCATCAATTTTACGAACAGTtagaaaatatttcgaaaaaaagctc attaaaactttttataaaagtggGTGATGCaaacgttttttaaaagatca taacgtcatttttacaattaaattcttaattaattttaaggattttagta aaaagcaatttgtaaaggcaattctttaaaagtgtaaaggaacctgaaac ataacttttttgctcaaataccaaaatgagatcattaatttttatatttt tgtacacAACGGGTACAGAACCtgattgaaattcgagccgttactaacaa ccctgcggggcccaaggcgccgagtatacacccggcacagtaAAAAGCCG TTGGCATATGTTATTAATAAACAGTTGTTGATATTATTATTTAGCTACTA CACTTaataaaaaaacttacaaaaatgAGATCGTtagtttatatattttt gtacaCAACGGGTATAACCtgattgaaattcgagccgttactaacaaccc tgcggggcccaaggcgccgagtatacacccggcacagtgacaagccgttg gCATATGTAAATAATAGAGGCTTGCCTTCGTATTGTTTGAAACTAGGTTT TTTTATGAGTATTACACTATTTCTTGTAAGGCTTAAATGATTGttaaaat tgttttcattttcagtacaaatttacaaaaaaaattgtaaagagGTTCCG AAGGACCCACAGCCGGCCGAGGAGAACGATCAAGTTGTGATCATGAAACT TTTGGGCAAGGCTGGCTCCCTTCTGTCAGGGAAGATACTCCTGGAAAAGA AATCAGTCCTTCGCGCCAAAAGAGCAGGCGAACAACAGAAGCAGGCGCTG AGGCGGCTGCTAACTGCAATGGAGGAGGCTGGTCTGGGTAGGGTCGAAAC CCTTCCAGGTCGATACCCCGTAAGTTGATCAATAAGCTTTTTTAACCTAA TAGAAATATTCATTATATGATGTTTTCAGACCATGGTCTTTTTTAGCAAT CAATTGTAATTTATTAAGGTCAATTTTCGCTGCAAACATGTTCTGTGTAT GTTGTTTTCGTGTGTTTGGAAAAAAAGTACCCCTTTCTACTTTTTGTGTC AGTAGAAAGTTAAGTTAATTTTTTACTTCGACATCATTTGTCTATTCATT AAACAACATTCTTTAACAATTTTGCGAAACACTTGACAGGACTTTGTACT CGTAAAGGGGTCTTGCTGTATACACATTGCCACTATAACAAACATATGTT TTTTATACTTTATACTATATTTTAGATCATCTACTTCCACAAGAAACGTC CAGAGGATTTGGAAGAACCCAACAAAGAAGCATTGCAGCGATTTGGTATT TCGTTCGCGGAATATGAAAGGAAGTTTTTCCTTCGTAATGACGAATCGTA AGCATTTTCTCTAGTTGACTTTTTTCCAAAACAAACCACAAACAAAACAC TAAAGAGTGCAAATTTTATCAATGAAGTTGGAAGTGAAGAAACTTTAAAG GAGCTTCCCTTTGACAATGATTTAATTTTCACAATTTTCTATTCACAGAT CACAACACAGCACCGACTTTGCTAGGCATCAACGTCCCGCCGTCCAAGAA CCAAACCCGGAAGTTTGAGAAGAAAGTAATAATTTACTTTTATTCTATTC TGCCTATTTGGAATCCATCTTCCAGACTTCTATATATGATACAAAAGTAA TACTTGCTTTTTCAAATAAAGAAGTCCAAATATAAAAAAAACATTAAGAA GACAAAGAAATAAAACTTTTCTACAGTTGTACAAGTTTATTACTTATCAC TTGCAAAAAAGGATATTTCTTTTTTTTTTGCAGAAAAGGATATTTCTTCA TTTTTCATCGTCATGTCAATCCTCTTTTGTTTTCCGCTTGTTAGTATTCT ACTTTCAAATGTCTTTCTAACTAAAATTGATAGGAAATTTTATAATCCTG TCAAAACTTAGCGCCTAGTGTTTCACTGCAGAATTATATTGATAAGAACG ATGAAATATAGTTTCTCAGCCAAGGTAAATTATCACTGAAATGCAGTAGA ATTATTGCGGACTTTCTCTATCTGGAATAGAATAGATTAGAATAGAAGTT CCCTTGCGAGCACGAAATATAGAAAGATTCCTTTGTACATGATTCTTCGC AGGGTTGATAATGTTTCTTAATTCACCCGCCCTTTTTCATTCCAGGTCAT GTTGCGATGGAATACGATGAAACGTCTTGTAAATACAAAAATTGAAAGTC TTTTGATAATTTAAAATTATTATATTTAATGTACAGTAAACTTTTGATAT TGACATTCACTGATCTTTTTGGTGGGGGACGTACGGTATTTCGGAATTGC GGAAATCGACCCTTTTTTTATGGCAATTTCGGAAATCGGGCAAAATTCCT TCGGTATTTTTGTATGCTGAAATTGTTTCGGTATCGGAAATCCATGAATT TTTGCTTCGAAATTTTGGAAATTTTATCAAAATTATTCGGCTTTTCGGAA ATCGCAAACCCCGTACGCCCCCGCCCTTTTTTGGAGCGTGAAATGATTTT ATGTTTCCTTTTAACTTTTGTTTGTCACACTTACCAGCACTTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048600TCONS_00048600Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048600-proteinTCONS_00048600-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:9701..16244 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.58 0.5 0.87 0.81 0.63 0.62 1.08 1.21 0.98 0.65 1.02 0.85 0.61 0.67 0.96 0.77 1.21 1.28 1.58 0.93 2.25 1.58 0.57 0.46 0.05 0.16 1.04 0.92 0.35 0.23