XLOC_031134 (gene) - C. hemisphaerica

Overview
NameXLOC_031134
Unique NameXLOC_031134
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_15:185974..189462-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031134 ID=XLOC_031134|Name=XLOC_031134|organism=Clytia hemisphaerica|type=gene|length=3489bp|location=Sequence derived from alignment at scaffold_15:185974..189462- (Clytia hemisphaerica)
GTTCAATTAAAGTATATAAAGATTTTGTCAGCTTGGTAAGTGAGATCAAT
TTTCACTTTATTTGAAAAAGAGGAGCTCTTGCTTTGAATAAGGAGTAGGA
CCCATTCCTGTAATCTGGAGGTAAATTATATCACGGTGATATCTATCTAG
CCTATCTATCTATCTATTCAAAAGAATTATTAAGATGTTCAGTTTGCTTT
GATATAATGTTCTATGCTATTATACAAGTTCCTTGGGTATAATCAATACG
ATGTTGGAAAGAGATTTTTGAGTAGATGAGATCAAAAATCAAAAATGAGA
AGGTCTCTTGAATAAAAAATGTCTATTTTTGCCGCTAATGTCTCACTTTA
TTTGAAGTCTAATTTAGCAAGGATTGGCTGTACACGTTTTTTTTATTTTG
ATATATTACTCTATGCTCTAACAAATTCCTTGGGTATATAATCAATACGT
TGTTGGAAGAGAGTTTTGAGTGGATAATCAAAAGATGATAAATGAGAAGG
TCTCATGATGCAAAAAATGTCTATTTTGTCCCTATCTGTGTTTCACTTTA
TTTGAAGTTTTGAAGTCTAATGAAAAGCATTAGCAGTATAAGTGTTCAGT
TTATTTTGATACATTGCTCTATGCTCTAACAAGCTCCTTGGGTATAATCA
ATTTGATGTTGGAAAGCGATGGATGATGAAATCAAAGATTGAGAGAATGA
TGAAAAATGAGGAGTTCCCTTCGACCAAAAATCTTAAAAATTTTGATAAT
TCTTTAAATGCCTTCTGGGACTAATAGTCTCTAGATTTTTTTGGGGAGAG
GAGATCTTTGGGGGATTTCGAAAATGGATATGAATACTATGAGAATCTAT
GAGTAGAATTGCAAGCTTTAATCAAGACAAGAAATTTATTTAAATCAGAA
TTTTTCACTTAACAAAAATATTATGGAAATTAAAGTCTCATAAATTATTG
AGTAACCTTTTTTGTATTATTTTATATTTGAAAAACAAATCTTCTATTAT
TTTAGACGATAACATCAAAAATCCTTCCATCAAAAATATTTATATCTAAG
TTGTCATGGCAACTAAAGTAAAACAAACAAATTGTTTTGTTAAAATCTAC
GTTCATACTTTTTCAATAATACGGAACTAGAAATTATTTTCAAAAATAAA
ATCAATGAAATGAAATAAAAACATAAAAGGACTAGGCCCGAATTAAAAAC
TGAGATCTAAGCATATTTTCATGAGTCTCTAACTCATACAGGTTTTTTAT
TTGCTTGTAGTCTAAACAAAACCCTACTTGCTTAATGTTGATTTTTCGCT
TAGAAGGTTGAATTTAAACAAATTCTTTTTGTTCATATTTCCCCATATAC
TTTACTTTAGTTCATAAATGTTATTGATTTTTTTTTCAGTTCTACGAATT
AGTGATGTGATGAAAGAAAATTGACTCGTTTACAAAATATACGATATTCG
ATATGAAAATGTTTTGAAAAAGATATAACATTGTTTGATTGACGATACTG
CACTTTTGTCCTAAACCAAAAATAAGGTAAGAATGTTTAACCCAGCCGAA
CATTTTGTTAACGTTCATTTTGAACAATTTTTTGACGTTAGATTGTTCAT
GATTTCTTGACATGCGCCCCATGGCAAACCATTCTTCTATAACCCTCCTC
TCAATAGTTCTTCTGGTCAAACGGGNTCCGTATATTTTACTTTAGTTCGT
AAATGTTATTGATTTTTTTTCAGTTCTACGAATTAGTGATGTGATGAAAG
AAAATTGACTCGTTTACAAAATATACGATATCCGATATGAAAATGTTTTG
AAAAAGATATAACATTGTTTGATTGACGATACTGGACTTTTGTCCTAAAC
CAAAAATAAGGTAAGAATGTTTAACCCAGCCGAACATTTTGTTAACGTTC
ATTTTGAACAATTTTTGGACGTTAGATTGTTCATGATTTCTTGACATGCG
CCCCATGGCAAACCATTCTTCTATAACCTTCCTCTCAATAGTTCTTCTGG
TCAAACGGGGAGACAGGGTTGTTTGAAATTACCAAAAAAGAAAGGCATCC
CTAAATCCCAGTCAACTATAAAAAAACATTCAGTGACTGGGATGTTTTAA
TTAAATGATGTTCCAAAAATGAAATTGACTATCCGTATTTCATACTACTG
TCCATCAAACCATTCAAAGTTATCTTACCAACGAAGCATTATCCTTAAAT
AATTTATTTTTCCCTCTCAAGAGGATTTTTAAAAGTTTACACCCAATTTT
TTTGGAACAGATTTCAAATTTTCAAAATTTCAGTCTCAAACATCTTTTTT
CTTTGTTTCATTTAAGTACTTATATTTCAACCGTAAATAAAAAAATTCAT
TATCCTCTTTTTTAATTTAAGAATCACTTAAGAATATTTTAAGTCTAAAA
GTTGAAATTTTTAAGTCTCATTCCGATTTGTAATTTTTATGAAAAAGTAT
GTCACGTGTGTAAAATCTATTTCTACTTTTATTCTAGATTGTTGTCAACT
GTTTTTAAAGACATCAACAAAAAAAATGGTCAGCGAGGAAGATCATTGTC
TCATCCATTACTGGACTCGAAACAAGGGCGAGAAAATCAATGGTGTTTTA
GCTATGGCAACTTTAAGTACTATCATATTCGCGCTTGGAATATTCGCCAA
TCTTTTATTGGCTATACCTATTTTATTCAATCGAATCAATCGACAAAAAC
ACTTTCATTATTTTTCAATAAGTTTTTCAAATATATTGGTACTGGCTATT
GGTGTACCGATATTGATGCAAGCTTTCAGTGAAAAGAAGTTCAATATGGG
TGATGAATGTAATGGTTGGTTACCTTTTATGTTTATATTCTTCCCAGTGA
AATCCATCTTAGATTCAGTCATTTTTACCATTGATGCATATTTGGATATT
TTACCAGAATCAAGATCTAATCGAACAGCGGAAATTGTTATCAAAGTTTC
CGGTATATCTATATCTTGGGTCCTTTCGGTGTTTTTGGCTTGTTATTTCA
TCTGGATTAACTCGAACAGTATAATAATTGCTTTGATTGTGCTATTTGCT
ACAACTTTTGTTTTGGAGTTAATTCTCTTGATTCACACAAGCAAGTGCGT
TAACAAACAGATAAGTAATGCCACTCAATCAAATTGTGACGTCATAGATC
CAGACTTGGATGACGTCATACTTAAGTTACATGGACAAAAGAAATACTTG
AATCGAAAAACAATTATGATTATCGTAAGCGCTATTTTGATTGGACAATA
TTTGGTTAATTTGAAAATTTGGACTGACCAATCAAAATATTTGAACAATC
AATTGTTTTTCAGTATTATTTTCGGGACATATAATACGGTGACTTTTGCA
TTGTTGATTGCGTGGGAACAAAGGATTCTTCAGAAATTTTATTATAGACA
TTGTATTAGTCATAGGGTTGTTGTCCCTGCTTGATTTTAAAATAATTGTA
CTGTATTTTTAAGGGAAAAAAAGAAAAATTAAATTGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049012TCONS_00049012Clytia hemisphaericatranscript
TCONS_00049011TCONS_00049011Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049012-proteinTCONS_00049012-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:185974..189462 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.16	3.32	1.98	1.56	0.1	0.04	0.1	0	0.16	0.35	0	0.45	1.7	1.64	1.13	0.4	0.68	0.61	4.37	3.88	0.91	0.37	7.77	8.05	0.2	0.22	0.35	0.77	4.38	5.19