XLOC_031190 (gene) - C. hemisphaerica

Overview
NameXLOC_031190
Unique NameXLOC_031190
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_151:22085..25894+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031190 ID=XLOC_031190|Name=XLOC_031190|organism=Clytia hemisphaerica|type=gene|length=3810bp|location=Sequence derived from alignment at scaffold_151:22085..25894+ (Clytia hemisphaerica)
GGGACATGTTGAAACGAGAGTGAGGTTGACGATACTAGAGCTGTTATCTA
CAGAAATATCGAAATCCACTGCAATAGTACGAGCGATAAACTTAAAATAT
ATAGAGTGGAAACCGCAATACACAATGGAGTTTTCATCGCTCGTTTTATG
TCTACTCAACCTTTTTTTTAGTGGTTGTGTCACACACATGTTAAAATTAA
GCGAGTGTAACAACTatgatggaaaattttctaagatAAAGTACAACCAT
CGTCTCATCGGAGATATGTTAGTTGTTATAGAAACAATCTCGTTAAGAGG
TTGTTTAACAAAATGTCATACCATTCGGTATGTTTAACTGTGAATTACAG
GTGAGATGACCCGACATGCGAATTGTTGGGCGTGGCCATTCAAGTGTTTA
ACCCGGTAAAGAATACAACACTCCTTGCAGCTCCTGGATGGCACCATTAT
GAAACAGACTATACTGCAAAACAGGTAAAGTACatcattttaacattttc
cttttaaaagctttttgatatttgagaaaacttttttaGTCCTAGCGGTA
AGAGTAAACACGTATTATATTTcgtacaaaatttgaaataatcaTTCAAA
ACgtcttagaccatgttcagacgttatgGTTCCGTTTCGTTCCGTTCCAA
AACAGTTCCgaaaacaagtgtgaacgtcaaaattcgaaacgtcaaaagag
aagacgttacaaagtaAAATGAATAGAAACGGTtttgctccacttttttc
atcggaacagaactgctccgttttcttgctccgaaacgttccacCCCAAT
ATGAACACaatcgatccgtaacgaaaatcataccggagcgaaacggaaca
gtaacgtgtgaacatggtcttaattTGAGGTACTCCTTTTCACCTGCTGA
ATACAGTTTGAAAGTTTTGGGTCTGGAGGGCGctgcaaatttttttccgt
acatggatgggagtatctcatcttgacggtcgggagtatctcatcttgac
ggtcgggagtatctcatcttgacggtcgggagtatcatcgacggtcggga
gtatctcatcttgacgGTCAGGAGTGTCATCGACGGGCGGGAGTATCTTA
AACTTATcttaaaccttgaaaaatcgacccgaccggggttcgaacccact
aaatgaaAGAGTTTCTGTTAAGAAACCCAGCGCGTTATCCactgagccac
actcgcacagcagaatataaaatttggaaatacttatagaatgacaaaaa
agacgggggtaatgttattataatatgggtaaaattgcccctttttaacc
tgactgaaattcgagccgttactagcaaccctgcggggcccaaggcgccg
agTATGCACCCGGCACAATGACAAGCCGTTACTAGCAACCCTgacctaag
caattccaaacaacaaagatgagatactcctgaccgtcgatgatactccc
gtccATGTACGAAAGAAGAATTTGCGACGACGCTATCAACAAAGTATAGG
CTTtctaaacacccccttctcacagacctggtaggattttttcagccatt
ggGGACAAAAATAACGGACTGGAACTTgtatggggattgatattcctaaa
tttttttatgactggggGAGTTCAATCCTTTTGTGGATTGATGgtccagt
ggggatggaaaaaatggcataacattttgcagtgaggatttgtttacttg
attattttcagtgggggcaaaaattggaggatagttttccaccggggacg
atattttggacaatttttccagtgggaaggggtcccagtgagTCTGTGAG
ATGGAGTGTTCTAGAGCTACTATTTTTCACCTGTTGAATACAGTTTCAAA
GTTCTAGGTCTGGAGGGCGCAATCAACAAAGTATATGCTTTCTAATAAAC
GTTTTGCTTTCCTTTTAGTTGGGACGTTGGTGTACAGCGAATAACCCTTC
ATGTCTAAAGAACGAAAGATGCGAAGATACCTGTGGGCCAACCCGTTATC
AATGTAGTAAGGGTAAGCATACTCAAGTATTCTTTGTTATAAGAATCACA
AAGCCTATTTTTGAACAGTTTTTATAATTGTTAAGAATCATGCTGAGCCT
CAAAAATTTGGTTgcttattttattgttttttagagtttttttataagaa
ccagtaaattttgactcagactgggatgttcttaattttttgaaatttcc
aggcTTATTTATTCTAACGATCTTCTTAAAACGCTTATTGTCTTTACATC
ActtaaaatttgttaaaagcTGTTAACATTTGTTAAAATCAGTACTGTCT
TAGTATTTTATGAAATGGAGGCTCaaattcttcttaatttgttctttgct
tttggccaattttcatcctcgtgttcttataaaattgtttttataaaaac
agaatGTTTTAGGCTAATCTTTTGTAAATATTCTGCACGAATTACAGAAG
CAGCCGacggagagattttttagaaagatgtgttctgaaactttctaggc
ttactaggcaacaagatcacatcaattttctcttgattatacccctgtct
ccttaaaaggtgtgttctgaagctttctagggttacctagacaacaagaa
cacgtttgATGATCTTGATTATACCcatgtctcgtcagaacacatcatta
tttccagctgattaattttcgaagatcttaTCAGAACAGAACAAAATTTC
TAGCCGAAACATACTTttagaacacatcggaaaaaaaggtcgcctcgccg
gctacTTTCGGAATTATAATTTGTGACTCTCCTATACTTTTTATTAGAGA
CACTGTATCAACTCATTACAGAAAACTCAGCATCAACGGAAAAGGTTGGA
TACGAAGCCGACAAAGCATTTGACGGGATTGAAAGCACCTATTACCATTC
TTATGGAGCTTCAACAGATGGTACTTTTTGGATCAAAGCAATTTTTGACA
AACGCATCTTCATAACTGCAGTTGAGTTTGTGAACCGATTGGAGATGGTG
GGATCTCAATGGGAGAGCCGTAGCTACAATATTGATCTAAAAACCATTAG
TTTCGAAGGAGGACAGACTGTTGAAACTTATTTTGGAAACACAGGGCAAG
TATCAGAAAGGGTTGTATTGCCTTGTAATCGGTTAGCTGATGGACTACTT
GCTTACCAATCCCCAGCAGATGGAGGTGGAACCAGGAATATTGCCGAAAT
TTGGATATATGGTGTATTGGCTTTTgaatgaaattaataaaaatgaaCTA
TTTCAATGACTTGACTAAGCTGCATTTTTTGTTGTagattaaaatttcaa
tttcaatttatacAGTGTCATAACCCGAACATGCACGAAGAACACAAtgt
taaggaaattttgagttatgcaGTAAGATTtatataaggcattgttaact
gaaggggcccataaaacttgttcgagttatagaggttcgagttaaagaga
ctccgctGTAAACTTTGGAGtttacaaaagaaattgaatgtttagATACA
CTGGAGCGTTTCTTTTGTgcctagctggcacacaacgttatttcaacgtt
catttatcgttatttggacgttgtgaacgttagataaacgtcgaaaaacg
ttgtgtgccagctgggtgacAATGTTATACAATGTATCTaaaaaaagcaa
cttagaattcaatttatacaaactaaaaCCAATAGAGTCGTTAACCTTAA
TTACACATTCCAACATGATGATAAAGTGAATTCGACCGAGCTAtcaaaac
acccccttctcacagagccggtaggattttttcaaccagtggggataaaa
tattGGACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049082TCONS_00049082Clytia hemisphaericatranscript
TCONS_00049083TCONS_00049083Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049082-proteinTCONS_00049082-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_151supercontigscaffold_151:22085..25894 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19	0.18	0.06	0.24	0.88	0.86	1.18	0.85	1.16	0.73	1.11	0.82	2.23	1.28	1.72	1.19	2.04	2.34	3.53	4.22	2.39	3.49	0.77	1.31	1.62	2.17	0.48	0.34	0.39	0.27