XLOC_031191 (gene) - C. hemisphaerica

Overview
NameXLOC_031191
Unique NameXLOC_031191
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_151:55721..59937+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031191 ID=XLOC_031191|Name=XLOC_031191|organism=Clytia hemisphaerica|type=gene|length=4217bp|location=Sequence derived from alignment at scaffold_151:55721..59937+ (Clytia hemisphaerica)
GCCTAGTCGTCCCAGTCTCATGGCTGTCCAGTGGATTTTTTATGCGATTG
CTGGCAGTCGAACTTcaagaaaatccatttttcaACTACCACATACATAA
TCTCATAATGGCACTTCGAACTTTCAGCTTCGCCAAGAATTTCGTGCCAA
CTATACTACCAAGAATGATGTCTTCAGAGGCAGGCTCAGGGTCTGGAAAG
gtacctaccatttttatttttccaaacaaCCAATCAGtcagccattttgt
tgtttgcaatgttttggttttcttctttcttcacaAAAAGTTCAGTGTAT
CTGGACCTCTTCAAATCTTTGCTAAGAACAAGttgttctcttttttcttt
acaaaatcaaaaagtcattAGCATTGTTAAAGACCCTCCCCAGCGTCCCG
GCGCTCTGGAAACGCCCAGAACGAAAAGTGCCATTTTTTCGTGCTCCGGA
GCAGCTTGCTCTGGAAGCACCGAAAAAGCTCCAGAACTttctggagaaaa
aaataaagtttttttagcTGCTCCGGAAAACTCCAGAAGTTTGTgccatt
ccagaaaaatttttgttacccccgtcGGACGAtgtacattttttaatttt
ttctagcctcggaaataatttttcttttccattggtggtcggaaattcca
atgaaaatccatgtatatacttttgcaaaatgcattggaaattccactct
ttttgccttttttaattcaattgccttggaaatttattacattttcttct
ctcatctcaccttggaaatttcgaattttggtgaaaacttttgccctcgg
aaatcctgtgtcatccgccctgttacagacaaattctggaatggcccttt
cTGGAGCACCGGGAGGGTCCTCATTGTTATTGACAAATTCTACGCATTTC
CTCaccagaaaatttttaaattataatATATGCTCCCATTCTGACTtctt
tgggccattccagaaagtTTTTGTTACCCCCGTCAGACGACGTACATTTT
CAAGCCtcagaaatgatttttttccagtAGTGGTCagaaattctgatgaa
aatccatgtactgTACATTTGCAAAATGTGTccgaaattccactcttttt
tgccgtTTTTAATTCCATGGCCTTgaaaattcatacattttcttctctcc
cctttggaaattttgaatttttggtgaCAAATTCTGCCcttggaaatcct
gtgtcgtccgccccctgttacagacaaattcttctggaatggccctttcT
TGGCaagctagctctaaagctctaaaacagcatctaataacatgaaaacc
atatgattcttcaatgggaatcaaaactataaagtgcacttacaaacatc
aatatgtcagatctagtAAATTAGAAACGGCATCATCTGATGATCATCaa
cggattttctgtcaagagtcttgtaaacattccaacaacttccatcgaaa
tgatctgtcacagctaagtctaccatttttagcgcagtCCAAAGATTGAG
CCGAGAACACTCGCAGAACGCCAACAGGCTCcagcgcgggtgaaaaactt
tattATCTGTCAATCatcttctcaagcgaagagaatgccaagcgattcta
gctttacgatagtgccgcggatcatcagtggatagtattcaattatcatt
atccctttattttgaTTCCTAGATCTTTTGCaaacaaaaggaaaaataga
aaagttgtattttttactaaaaatcttctatgtggcatttttttgcaaac
ttccaaaaactgatttttgtcccactTTTGCGGGACTTTATCTTAAGTGC
TTGCATGCAGCATaaggtacaaagtccaaatatgcgttttcCGTATCACA
ATGGAGCACATGACATCACTCATGCAGCAAATTATATGCTCTCTAATcgg
tcagttagtcacactagcgtcccgccgaaatgcgtatcaaagattaatgc
tgcaaaagcgttatattgtttacttgattcgcaagcaaaaaaatgtgatt
catgaaaaaataacccggcactttttaatgaaaaaaaaacattttcaaaa
tctatgagaaattgcctaaaatttggaccatagatgaaaaaatttgagcc
aagccaactttgaaaactaatttgtagatcaacttcccaagaaaaagatc
tacaggggAGACAGAACCTTCCTAGAtctgaataacaaaatttgattggt
tgttatttctggctgctgcacgttcgcaatctgtcattttgtctcatttt
aagttttcaagttttaattttttaaattttcttgggaatatgaacttgat
tcaggtaactctcatccttgttgttgcaaatacatcctgtagatgactga
tatgttgttttttctgaaagcttgatttcctagtgtgactaactgtcggt
gtcagccattttgaagaaaactcaaaaattaaaaaaggcgCGTTGACAGT
GAAAATTCATTTCTCAAGGTCTCTGTTGCAGAAATGTTAGCTCATTTGTG
TTGTTAAATGCTGAGTttatggagaaaaaaaacaaccaaatgaCCAaatc
ctgccaaaatttcttcctttaatgtagtTTAactctacatgttttttttt
tataagcataacgcttataagcatatgaaggctcagatttgtagaattcc
taagcataacataagcatatgtgtcagcctaaaatatttttcaagtacat
caagttgtcatttctttatcagtttaaaatggtttggttgaggtcaagta
aaaaaaagactttccacggctaccactgctcccaaatcttttttacaaaa
tttctaaaatttcactaaaacttGGCTTGGGGTGAAtttaagcatgattc
ataagcatataataagcataatctatgcctggatgctttaagaacttaag
catacacgagcctgaccaaggggcatacacttgcttataaaaaaaaaaca
tgtattaacATTTGAatttcgttttttgtttttatttaggGTGGCGGCAG
TGGTGGCTCCATCAGGTATGGTGTTTATCTGCTATTAAAATCTTGTTGAT
GccttttcaaagtttgaagtgtTGATTCTGCTTGTAGAAATGGCCAAGGT
TTTAACAAATGTGCTGTTCGAAatctatttaaaaatatttccatcctctc
aaagttcaaatctgggcaatTCTTTTTGttgctgactttttttaaattcc
agGTTGACCCAAATTTATTTATGATTATGATGAATGCACCTTGCTATGTA
TAAGAGCCAATTAGAATTTAAGTTTTGTTGAATAGATgtttttttagtaa
ttttctTTATTAATTTAATTCTTTCCAGAGATGCAGGAGGTGCATTTGGT
AAGATGGAAGCTGCACACGAAGACCAATACTTCAGAAAACTCGTAATTAA
TTTACAGtcacaaaattctttttttacgatTTCTTCTCTGATTCGCtcgt
tttttcaaggttttgctGGCACAGTTCAAGCATTAAAGTTGAGCTCAACC
TGGCTCAACtgcgaaaatttgaaatttaatgcTTCTTTAAAGTCAATATC
CATTGTAGGCATTGTGAGTTTTTAGAACTTTGCTAAAAGTATTTCGCCGA
TGAGCTCTTTTCAGTTGGGACTGTGAAATCCGTAAGATTTTGTCCTatta
aaataataaacaaatgtCAAAAGCAATAACCATTTACATTTTTCCATTTG
TACTTCATATTTGTAGCAAGCTGATTTATTAGCCAAGATCAAACGTGAAC
ATCAAGAGCAAGCACTGTATCACGATGATGAAATCTCTTTCCACAACGAC
GCCATCAACCGTCACAAGGAAGCTATTGACCGCCACAAGTTGTTGAAAAG
CCAACACGAAGCCACCCTCCGCCAACACGACGGTGATGAGAAACAAGAAA
TCTATAACGAACGAAACGGCCGTAAGAAGTAAAAACAGCAACGACCGTCT
TGATACtgtaaatgaaaacaaaacggCCGTCGACTGAACTCGGTAgatcg
aaacaaaaacaacaactgtgtttgaaaattcaaatttttcatttttttta
ttggaaaagTTATGTATTGAATCATATAATTTTTCTGacaatttaaacat
ttttttattattttgtaataATTTTACTTTCAGCAGAGCATAATGAGGAA
ATAAATCCATTTTACATCTTTTTACGCTTATAAACCTTGAATAGAACTTA
GATATTTATGTCGAGAc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049084TCONS_00049084Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049084-proteinTCONS_00049084-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_151supercontigscaffold_151:55721..59937 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
381.17	403.62	481.76	539.66	367.3	305.05	418.97	441.98	517.02	487.96	384.51	458.03	248.4	268.99	285.08	298.32	389.02	342.21	152.47	150.2	200.98	196.2	265.94	233.84	143.27	153.27	311.61	232.02	208.39	177.64