XLOC_031234 (gene) - C. hemisphaerica

Overview
NameXLOC_031234
Unique NameXLOC_031234
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_153:15837..18668-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031234 ID=XLOC_031234|Name=XLOC_031234|organism=Clytia hemisphaerica|type=gene|length=2832bp|location=Sequence derived from alignment at scaffold_153:15837..18668- (Clytia hemisphaerica)
CCTTTAGATAAAAATAAAATGGCTACTAGTGATTATAAATATACAAAGAT
CTCCGAGTTGAAAGAAGGTGATCGAGATGTCAACATTTATGGTATTGTCA
AATATTACAGAGAACCCATCCGCACCAGTACTGGTCAATATAACTCCATG
CTTACATTGGTCGATGAATCTGTGCAAGACGATCTGGAGAAAGGCATCAG
ATGTAATTTGTTTGGTAACAGTGTTGATGAACTACCACAAATCAACAAGA
TTGGAGACATTGTACGAATTCACAGAGCCTTCATCAAATTCTTTAATGGA
AGGTTACAATTGCAAGCTAATAAACGAGCTTATGCATGGTAAGATTCTCC
TTCAATCTCCTTCTTCAAAACTCACTGATCTTCTAGCCAAGAATATTTTT
CATTGTTTTGCTGATAGTAGAACTACGGCCAACATAGTCAGATAGAATAT
GAATTTAGGGATCACCAAAGAGTTTAAGGAAAGTTCCTCATGTGGTATAT
TTGTAAGAAAGAAATGATAAATAGGATGATAAACGGGCACTAGATTTTTC
ATTTTTTTGAAATTTCTATGCATAGAATATCGAGAAAAATACCCGCAAAA
AATGTCCATTTTTAGCTCCAGTATGCTGCTACCATGGCTCCAGACCTTTT
AAAAGGCTAAAATGAACAACGTGGAAGTGGTGAAACTCTAAACATCCATA
ACAATATCCACCTATTGATTTTAGGATCGTGGTGTCAATGGATGATGTGN
TCTAAACATCCATAACAATATCCACCTTTTGATTTTAGGATCGTGGTGTC
AATGGATGATGTGGAGAATGTCAAATCATCTCATGAGAATTTCACTTTCA
CCATTATAGACAGAAGAACAGTAGAAGCCCTCTGTGAATTCTACAAAACA
AATGTTACATCAGTCGACGAAGATGCAACTAACCTGACAATGTTCAAAGA
TTTTACTATGAACAGCTACGTTAATTGCATGGCAAAAGTGATTGGGATTT
ACAGATTCGAAACAAATTATTGTCTATTGAAAGTATCGGATGGAAGTAAA
GTCAGTTTTTCATCGTTTAGACAAAGTGGCAAAATCGATAATACATGTCT
TATGCACTGGGTTGACCAAGACGCTGCAGAAGCCACCAGAAACCATTCCT
TTGATATTTCAGTTTTTGACGACCATGTAAAGATTCTGGACGATTTAAAA
GTGGGTGATTATGTTTTATTTTGTAATCTACACATCAAAAGAGTGACCTA
CAGCACCTATACTTCTGGAATGATACACACATTCAATCTGAAAGAGGTAT
GAGAATTCATTTAACAGAACTCGTGTTTTTACAAATGTTTCTTGGTAGTA
AATTAGTCGTCTAAATGGGCCCCTAAATGAAAAAAAGTAAAGCTCGAAAG
AAAAAAAATCAATCACTCATTTTTGGGAGGTCAGTTTTCTAAATTATAAC
GACTATAAGCTTATCCTTTGAAAAGCCTGGTTTAATTTTCCACCTTTTAA
GATTTTGGAGAAACCATGTAACGTTTTCGACAAGACGATATTTATTAGCG
GTTTTTCGGGGGTTAAAAGTTCTATTTTAGGACCCATTTCGAGTCAATTT
GAAAAGACATTATGAAAAATAGCCGAAAGTTTTCAAAATAGCCTTTCTCG
GCAAAAAAAGTGAAGGGAAGCAAAATAAATGCAACGAGCTGAAGAAAAAA
GGCGCTCGGAATAATTGTCGAGTCCCCCTCCTCTACGGCACGTTCATCTC
AATGTCCATCTATAGCTAAATCTACTTTAATTTTTAGTTGTATATTTAAA
CAGTGTTATAACAGACTTGTTTGCAAGTTTGATCCAATCGGTCAATCTTG
CCTGAAATCTTAATACTGCAATCCCGAAAATGTCTTACTTTTTTTTTCAT
TCTTTAGGTGCAAGACAGTAAAGGTTGGGCGGAAGTTATTCTTCATTCTG
GGCGCTCCTACGGGCGTGGAATTTCCATTGTTGAGGCAGATCGTACTGGT
GTTGCAGACATCAAGGGGCGGGTACAAGCTTTAATGGACAATTATCAAGC
CAATAAAGCAAGAGAACACGTACCGAGACCTTTACAAGACTCTTTAACAA
CCACTGACTACCCAGCACAACCCTTTCGTGCAATACAGACAATTCAAAAT
ACAGCCGTACCAAATAAATTTCGTTTACGAGGGAAATTAATCGGTATAAA
ACCACGCTCGATCGAAGACTTTGTTATGAAAATGTGTAATGGGTGTGATA
CAATATATTCACGTAGTACCTCCAATAAGTGTTGTCCGAGCTGCCCGGAA
AAAGAACTAGAGCATAAGATATATTTTCAATTACTGGTCGAAGATCACAC
AGGACTTTTAAAAGCTGACGTCTACGATAAAGAGGCAGAATATTTCTTGA
ACTCGATGACCCCACACATTTTATTGACTGACTCAGCGAGACGTGAAAAC
GTAGAGTTGAAAATGAAGACTTTGTTAGACGACTCGATCAATCCAAGAGT
GAAAATGAATTTGAAACACTTCCCTTGGATCGAGTTGTGTTTGTATTCGT
TCAAAGATGCGTTTAATGGAACTGTTTATCGTGTTTTTGGAACAAGTCTA
ATTTGACCTACTTGTTCTAACTGTACTTTTTATGAACTTCTTGATAACAT
TCCGCAAACTTCTGAAAGAACCATTCTTCTGCAATACATTCGTGCAAGTC
TTCTCAGGAAATTAAAACAATTGAGTGTAAAGCACCAAAGGGGGACAAGC
TGGAGTTTTTACAAGCTCTCGTTTGATTTGGTTGGTCGTTAACCTGTAAT
AAAACAATTTTGTTACTTTTTCTAAAGAACGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049188TCONS_00049188Clytia hemisphaericatranscript
TCONS_00049187TCONS_00049187Clytia hemisphaericatranscript
TCONS_00049186TCONS_00049186Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049187-proteinTCONS_00049187-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_153supercontigscaffold_153:15837..18668 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.81	23.81	9.78	7.16	7.37	6.32	7.04	6.79	6.37	6.61	5.24	5.6	4.61	4.13	3.94	6.23	7.47	7.05	1.61	2.85	4.73	4.99	41.95	29.83	4.27	5.51	4.57	5.74	22.3	26.89