XLOC_031648 (gene) - C. hemisphaerica

Overview
NameXLOC_031648
Unique NameXLOC_031648
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:1022117..1032229+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031648 ID=XLOC_031648|Name=XLOC_031648|organism=Clytia hemisphaerica|type=gene|length=10113bp|location=Sequence derived from alignment at scaffold_167:1022117..1032229+ (Clytia hemisphaerica)
tgactaaataagaaaaaaaattgacaaaaaaaacatcatgagatgaaatg aatttaaaaaatgttttattccAATGATTCATTGTATTTTTACCATGGGA AGTTATCAAGGGATCAAGCATCACAAATACTTTTGAGACATGGTAATGGT AAAGATGGATATTATTTAATACGTGATTGTAGCCGATCGCCTGGTGATTA TGTTTTATCAATATGGATCCGAAATCAGGTCATGCATTTTCAAGTCCAAT GTTTTGGTGATAACAGATTCGCAATAGATGATGGTCCTGTATTTCAAGGA TTAGATTCTTTAACTGCACATTACAGTGTGTCACCAGATGGTTTACCTTA TAAATTGACTGGTTTTGCAGTAGGACAACTACCTCCGTTGAAATCTTTGA AGTTTGGTGTTGATACTAATTTACACAGTGCTTGTCAAAAGAGGAGTATA TCAACTGTAAAGCAATTACTACAAGACCCTAAAGTTCGTTCTGATATTGA CGGAAGGAGTTCCAAAGGACAGACAGCCCTTCACATTTCTTGTTTGAATG GAGATAGTGATATTGTAGCAACCCTCTTATATGCGAAAGCAAATACTTCA GCTGCTGACAACACTGGTAAAACTCCAGTTCAGGTTTGTATTTaatattt tcctttggttttgaTTGCTTTTAAAAACCGGGGacaagatggagttttta caagctcttgtttgttttggttggtcgttaaccagtaatgaaacaatttt gttacattttttaaagaacgcatttttttcattatttcaaatgatcaatt attaaagtatcttaaaaaaactctatCTCATCTCAAAAACCGACCCATTC CCATTAAGTGTACATAATTTGTCTTTCACTTGTACGGTTTCTTACATTTT GGAGGcatttcttttttgtcacttCTCAGCACTTGGAATTGTTTGCAAAT CTCCTCTGGGCGAAAACATCTTTTTGAATGCTGCAGAGAATGGAAAATGT GAAAATcttatatttatttcaaaatattttttcaaggcAACTTGGAAGAA AGTCGTTTCAATGTTAtgttgggcttttccagaagaatattttaccccca ctgttgaggatattgattttgaagtatcgaaccccctgggtatcctactt tattagtaaagaccaggatatccactcttaaaaatatgctcaactccctg gatatcctctcttataaagatgcttacccctggatatggtattttttact tgaaaagacactttaacccctggatatccgctcccatGTAGAtctttaac cccctggatatccgatatcctcaacagggggaaggcacggactatttctg gaaaagcccattcctAATTACTGTTTAGGTAACATGTATGGCTGGCCATG CACAAACCTTACGAGTTTTGATCATGCAAGGGAATGCCGATTTTCATGAA CGTAATACGTTGAACGGTTGGGTTCCTCTTCATGAAGTTTGTATGAGAGG TTTTATGGATTGCGTCAAAATTTTGTTGTCCTTCCAAGCATCAATGCACC CAAGAACGAGTGATGGTGATACACCACGTGATCTAGCGATCAGATATGGA CATTCTGAAGTCGAAGAATTTTTAGGTTAGActcaaattcaaaaatataa ttcatttaaaaaaaaccaCAATGTTTTTTAAAACGCTTCATGAAGGAGGC GGAAAAACGAAAGTGGAATGTTTTGAAGCTCTCGGCGTCCAAATTTCTGC TTAGCGAATCACTCTTTTGgatcaattttaaaacttattttaGCAAGAAG GCACAATAGCACCAGTTGTGTAACCGTTTGGTGTTGAATTGACGTTACTT TCAAGCTTTCATATGTGATAccatttcaagtttttaaacTTTCTTAATGG TACTCTTAGCTGAACAAAACTGTGTTTTAGATTGGATTGTCACTATTTGA TCACCATTTATCTTAATACGGATTAGAAAAACATTTGAGAGCTAAAAACA TGACAAAACCAATGATATTCCTTTTCTCGCAAAGTTTCGGATTGCTCCAC AACAGAGTCTATTttggtttgtttatatttcaccTCGTACGTTGTAATCT ACTAAAAAACACACGATTAAATGTACACAATATTCTGATTTGATTTTCAA TGACAGTATATTGATTATTTTGCTCATACAAAAAAGTTTCAGATTTATGA ATTTCATACTTTTTAGATAACTACCCTGTTCCTGCACCAAAGACAACACC AATGCAATGGCTTCATCAGAATCTTGATCGGAATGTAAGAagtcatattt tttaattttaaacttGGAATCATTGTGCTGTTAGGGCTAGGTAGTATAGC TAGTAGCGTTGGCCCagtggaattttttttcttgttagtTATAACGAACG GCCGTAAAAACTGAAATAGTTACAAAAAACATAATTTCATCTTCTGAGAA ATTCATATTTAAAAGACCCCTTACTAAAATAGCTACGGCACTGGGGAAAG AGAAAGCAAGGGTATCAATGAAATCGGGTCAGAAATTAAATGATAAGGAA ATGGGAAATAGGGATCCAAAGAACAAGATTCGATTCTTAAACCAAAAGAG AAATTCTTAAACTTTAAGCCATCgccggcaaaaaaaaattgaatatcgca aaaaatattgttgttattgtttccgaaaacccgcgaagcttctgattggt caagcccTGAAATTGTATTGTAATGTCatgtgacctaggtaggatttgcT ACCTAACCACGACacaattttcagcaaaagtacgacatctagcccATCGG GCTTTATGAATCTATGGGTAGGGTACCACACTACCAGTTTGATGGAAAGG TCTATCTATCATTCTcatataatttctttttttttaggcTGCAGTGAATG TGTTAGAATCAAACGGCTTGATAAACGGATCATTTCTCATTCGAAACAGC ATCAAATGCCACGGATATTACGTCCTTTCTCTTGTCTGTGAAAAGAAAGT CTTCCATTTTCAAATCCAAAGCAGGGTATGGTTTCTCGAATCTCTTGTAT TTTTCGTCTCCTGTGTTTTTTGTTCATATCTTTTATTTTTGGAATAATtc ttgaaagaaagatttttttactgGAAGGGTGACTCATTTTGTTGACAATT TACCTGCAGGctttcttgtttgttttttatttggttaTTCGATTTTTTGT CTCTATCAAAAATACCCCATTACTAACTTACAAATCTACTTTTAATTTCC TTTCTCAGGCTGATCGTTGGTTTTACATCGATGATGGCCCTTTATTCGAG ACATTACCACACCTTGTAGACCATTACCTACAGTATGCTGACGGTCTGCC ATGTGTGATCAAAATTCCTGTTCCTTCACCAGAGAATCGTAATTTGACCA AGAGGTCACCTCTACCACCTCCACCAGCTCAAGGACATCCTCAATCACCA TTACCAGGGAATCCTTCAGGGAATCCAGTGTCTCCTCTCGTTTTGCCAAG CAGACCACCAAGACCCTCAACTAGAAAAGTAATACTATTTTCAGTTTTTA CGTCTGATACTGTCTGATACAAGGGCGTTCTCAATTAAAGGCCTAACAGA CCTGTTGATTTCATTGCTAGTTGATCTCTTTGCTGGTATTTGGTCAATTT TTAGGGGGGGGACCTCTGGTTGCTAATTTCGGTCCCCCTAGCCCCCCGGG ggcttaaagctttttttataggcTGGATGGTGCGATTAAGTGGCCAGGTA Gtgtatggtaatatgcttttgcttaggcggactgtaaaacagtccgccag attttagttgtttttggaaggtaaaaactgTATGaagtaatgtttttatt tgagaataagggattgtaAATCTGTTAAtcatgtttgtttctcatttttg attatatttttcaactccaagtagttttattgtcatttggatttttaaca gtttctctcaaaatggcgacctcgccaaatgctcctagtctacttcactg gactcagcgtcataaaaaattatcaaaaagcaaagttcagccacaagtag actctagtctacggTCCCCCTCGCTATTTTACACCATAGTTTTAAGCcgt aaagaggaaaaatattgaGGATGACGGTAAGTGAGTCGaagcaaaacaaa gtcgatacttgatgtacggctctatatcccCTTTGcttacctaaacagac gacggtattttggtgtttttaccgatgtcgagcaaagtggacgacGATTT TAGTAATATGACAACTTTGCTTTATATCGTCTCCTTCGATTCAtctcaaa tacataaactcgctattttattgaaaagtggGTCTCCAAAATAGCAACTT TGCCTCTCCCAGTTTGCAGCAACTTtggtcgacccaccacgctactcgAG ATGATGAAAACTGAgatcaaaagattttcatatatTATATGTGATATGGC TGCAAATCTTTCATTGCTTACATTACTTATTCCGCTCTTTTTACTAAGGA CTTACCATCGCCTATACCTCGTCAAGGTAGTCGAGATGATGAATTTCAGC ATCAGCGCCCACACCCACCACTGGATCAACGCCCTAGCAAGGGTGGACCA CCCGTACCAGCAAGTCGACCAAGTGTCAAAGGTATGTCTCTAATTTTAAC TCTATTTTTAGTTAATGTTTTATTTCCGAACTTAGTGGTAGAATAAGTTT TGGGAAGTTTATCACAAGGTCAATATTCGTTGAAATCATTTCGTTATGTT GTAGGCTCACCATTACCAGAAACGCCCGCCTCTCCTCAGCACACCCCTCA AAGCCATCCACAATTCCCGCCCTCGCAACAACACCCTCCGCCACAGCCGC TCAACAAGCCAAAAGTGGCGTCACCAAAAGCAAGTGTGAAAGCAAAAGGT ATTATGgatgtttttctgattttcgaaATTGAAATGTTATATGTCGCATA TGTGATTAGGATCCGTTATTTCTTCCTTCGTTTCAAGCGTAAAATTCCCA CACTTCGGGATTACACTTCTGCTctggtttaaaatattgaatttctctGG TTACATTGtataaggcctaaaagcctggagctatctattgtgtagactaa taTGTGATATAATAAGTAAAGTTCGATAGTTGTTATTATACTGTGATACG TTTCTTTACGACTGGTGATTGTCGTTCATACGGACAGCATGAAACTTTTA GTGCCAAAAAGTCTTTCTTCTAAAAGCTCTGACTTTTCATCGAGCATTTC TGGTGTAGAGGAGGTTATATACTGCGACCGACAGCTTTTTgtcaaataaa atgaatttttttggtcacgtttgtttttctttttagccaaATCGCCTGCA CAACAAGCCAACAACGCACAACAAACGGTCATTCAAAAAGATTCGCTGGA ACTTGGTCAAGAATTGGGCGTTGGAGAATTCGGTTCAGTTTTGAAAGGTG TTTGGAAGAGTCCTTCTGGTGAAAAGGTTAGAGCATCGGTAGCTTAGACA AGGAaagcgcaaaatttgtgtagaggagagcagatttttatgacacagta atcatattttgatattatgagtagataattacagtggcatataaatctgc tctcctatacaaattttgcgcccctcctgtctgcGCTACTGAGCATAATT ATACATTTGACGCTGTTTGATTCGATTTttaaggggaattggattttcat cgaataagggagcgttgtttatgagagtttcttgttgacggtgactttca atattcaTGGAATAACGGAGCGggtcgaatagtagaacgtcaaattagag GGCTTCAGCTATATCCTTTTTCACTAAATTCTCAAGTAATATTACTTGCT CAATGAGTTTATTCTGGTTTTTATTTGATTAATTATTTAacatctttttt taaactttgtttttagatttctgtcGCTCTGAAGACATTACACAAAGACA AATTACTCCAAGGAGAAAAGGTACAACGAAAATAGGAGACTaaacttgaa aaagattttcttcggCAGAGTAGTGTATGACAGGGCTGATTGCTCCACGA GTCAATCAATCAAagatattcttttgtttttattttatactcGGACTTTT AAAAGTTAACTCTATTTTCTTTTTAGGAGTTTTTGCGAGAAGCGCGCGTC ATGTCGCAATTGGACCACCCGTGTATTGTACGCCTTCTGGGCGTGTGTTT GGGACCGCCAATGATTTTGGTAAGACTTGCTCATTCCATTGCACTTTGTT CGTGCtatttcaaagtatttcaaaatgaaactcgGGGTATTAATCCCTAA TTTCCCTCAATGTCATATCATTACTATTACTAATTTTTTCACCTTCCAGA ATACTATTAGTTTCAACTGTAGCATTCTCTCTCTGGTGAATCAGAGAAAA AAGAACCTGTGTTTGGAAAATTGGATTCTTTTAGGTTTTAAATGATGAGT AATGTCACAAGCCTAACTTTCTTAATAGTGTTCTTTAttctaaaaactca aaaataaaatGCTACAGAATTGAGCTTGAGGACACATAGAGTCTTAAAAA TTATcggtttagttttgttttcaccgTCTAGAGTTTGAAATTAAACTGAC GcatcaaagaaaaatatttacatgCTTGAATGTATGCTGTGTGAAATTTC tgaagctttttttttttggacctacgccggttgaggtcctataaattaac cgtagtccgtccgttcgtccgttcatTATGagtttttctcgagattggct cattagttttttctgtatttttgcacaatgatgcaaaatggcaatgccca aaatgtgacgaagcccgattttcgggaaaaaaaattttttgagtaaattt cagccaaaacacGGCTTAAAAATGAATCTCGACCGAAagggatttttttt cttcggaattttaTTGTATTGTCAAGAAAACGAACGGTATGTATCTTTCT CTATCATAGGTTCAAGAGTTGGTGACGATGGGTGCATTACTGGACCATCT CATCGATCACCAAGACGATATCGGAGAAATTGATCTTAAATTATGGGCTG CACAAATTGCATGGGGCATGATGTATCTTGAACAGAAACGTTTTGTACAC CGTGATCTCGCCACAAGAAATATTCTACTATATAATAAGAGTCAGGTAAT GAATTCTGTTtttatcaaggtgaaattttgaTCATTCGAGAATTCAGAGA TTCGTTCTATTCCGGCTTAAgataaatttcctttgttcttttttcaGTAT TAAGTCGAGATCTAATCACCATATTAATTTTTGACTCTGAAATGTCCGCT TGCAATAGAATTATACAGTCGTTTATCATAGAAGGCCTCAGGAAAAGAAG CCTGGGgttctcattttgatttgttccTGAACTTACAAAATAAGAATTTG TTCAAAATGAATATTAGTAGGGGTCCAAGCCTAGgggtcccgtgacatct tttttacgacctagccatttttagtccatTACAAAGAACAGTAttttata agatatttttgagagggagaacgcagattaggcccgggaaaactttttat gaccataatagtgacgccataggcaaaactgcaagggaaaatgaGGGGTA GGAAAATAGCTGatattcaaaattcgaaacaaacgaaaatgattggtaca aTCTGAAAGAGCataaaattctgagcaaaaaaatgtattacagcAATTCT CTGACTCAAACATAAAAAGAAATACAGCTTCTTGAATTTCAAAACcatac cgacgtcagtacgatcaagacaagatttgacgtcaaatcacagtagagct gacagttaaTTGGTCTTAAAGTGTTGTAAAAAAAGTcgtcgtaaaaaaga tgtcacgggtccCCAGGCTTGACCCCTACTATATGAAAATTTATGACTTG CAATTGTAAAATGAATGATATTGTTTTACAGGCGAAGATCAGTGATTTCG GGTTATCGAGAGCTGTGGGAGCTGGTAGTGATTATTATCAAGCGCAACAA GGTGGCCGCTGGCCGGTCAAATGGTATGTCGTGCACTCTATCCTAAAATT AAGCACCTAAATTTTTGACACTCTTTGAAAATTCACGTTACTTGGTGGTC TACTctttttttgatggtttttcttttatacccttatccaaaatttttga ggtCTTCCATGAAAGTTGACCCTAAAAGCTGGAGGGGGCGATACAAAGAA AACTGCAAAACTATTTTGAAAGACCGTAATTACTTTTAACTCCTTCATTA CATAATACAGCCTGCTTACCAATGGACTGCTTTCTTTTGTAAggttcaga aaaaaaacatcaatctaTATAAAACCCCTTAAAGTGCCCTAGTAAGGACT GTGTCTCGTCGATTCCGCTTTAGGTATTCACCAGAATCGATCAACTACGG CACATTCTCACAGAAATCTGATGTATGGAGTTATGGAGTAACTTTATGGG AGATGTTTACTTTCGGAGAGCTACCGTACGGTGAAATGACCGGAGCTGAG GTTGGTGttgttttctttataaaagTGGCGGCgtagttttttatcaatat caAATCTTTTCAAACATGATACAAGCCAAATCCATAATAAGTTGAAGGAA GTCTGGACGATTATAGATCTGGTTAACGCTTTAATATCCAtggtttttta gaatcagtgaaTTCAATGATACAGTCCACGCTCACTAATTCAAGGGAAct agattttcatcgaataagggaatgcatcgaatagtagagcgtcgtttatg aaagtttcttgtcgatggtgactttcaatatcatcGAATAATGAAGCGTC GATTGTACTTTAAATTCTGAATTCAATTTACAGGTGATATCGTTACTGGA GCAAGGTCAAAGGTTGGAACGTCCTGAGGACTGCCCACAACACACGTACT CTATCATGTTAAGGTGCTGGCATATCGACCCCGCACAACGACCAACTTTC AAAGAACTACACACGATCTTTTCCACGGATCCTGAGTACGAAGACGCTCG AAAGTATAGAGAAAGactaaaaaagaaatagatGATACATCTCTACagta tatttttttcagacgTCACGACTTTTGTCTTGGTTTTAAAtgcaaatttt cttttaaaaaattgctttaaattATTTACAATACGTTAACTATTATGTTG ATTGTGCCAAAAAACACGTGTTTTTTaattagaacaaactatataagaac ataaggtttcgatggccaaaatgttaagaacattttaaggctttgcggac tctaaaacgcctattttcttaggaaaattgacaaaaatactctcTAACAT GTTATGAAcatttttaaggccaatttaaTATCTTAAATTTTTGCATTCTT TATGATGATACTATGACATTTTgtaaatatgaaatatttttttcgaaatt tttgacATTGGGCTCCTataccttttttgtttttgacacgatttgttctt ttgtttttataaatcttGCTTGAAGCATTCTCACATCAAACTCAGGAtta tttttcaaaccaaaaaatctttcacgtacaaatttctatcgaacaaagac aaatgaaattttcagggaagatttgaaattttctacccTTGGTGAAAACT GTACATTTGTATGTTCATTTAAAATAACTTTATGACAATTTCGCTGACTT ACGTCAATTTTTCCCTTTTCGCAGATTGTGATAGTTAAAGTTAGTATCTT TCAAATTCCGTTCCCTAAAATAAAATTGCCTCcctttattactggttaac taccaactaaatcaaataagagcttacaaacgcttgtaaaaactccatct cgtcccaaagCATCCCCTTCGCCATCACTTCGCCATTGAGCAGTGCAAAA AAGGGATTCTTCATCTCAACATCGGAGTTTTAAAAGGATCTGTTTGCGCA ATCATCATTATTTCGGGGCTTAGTCACCTCTATCAACTTTGATTGGATTT AGTTTTTTACAAAtatgaatgtaatttaaatttgatatctcaaaagaatt tatttgtAAAGAAACTACATATAACTTATCCTCTTTTTTGTCCTTGTTCC CTCTTTACTCAAATTTGAACTTTAGAGAATTTTTCGTGAATTTAATACGA AAAGTATGCCATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049928TCONS_00049928Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049928-proteinTCONS_00049928-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1022117..1032229 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.61 19.2 8.41 5.12 34.9 26.63 26.71 29.57 20.24 28.23 18.33 20.57 18.17 19.65 16.92 19.6 18.35 17.06 18.82 22.49 15.88 17 22.32 23.01 15.97 17.83 10.86 10.1 18.05 18.82