XLOC_031958 (gene) - C. hemisphaerica

Overview
NameXLOC_031958
Unique NameXLOC_031958
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_172:80849..88114-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031958 ID=XLOC_031958|Name=XLOC_031958|organism=Clytia hemisphaerica|type=gene|length=7266bp|location=Sequence derived from alignment at scaffold_172:80849..88114- (Clytia hemisphaerica)
GTGAAAACAAAAAAATAATCAAAAATAAATAAATAATAGAAAAATGTCTA ACAAAGATAATGGGAACGTTCGAGATTTGTTCGGAGGGGCTTTAAGTTGC TTTTTTCCCACAAATGCTTTGGACATGAGGTAAGTGATTATTCATCACCC GAAAAAAATGCACCGTATNACATATTCTTCTCTTTAAAAAAGCGCTCTGT ACTTTTTTGGGTTATTGCAAACTCTTTTTTTCTGGTTTGGTATCAAGTCT CTTTACTTTTAGTATTTTAAATTTTTTTAAATGAGAAAAAGTGTAAATTC TGTATTCTTGTAAGCAAGGAAATCCACCCAGTTACTAGTGTGAAATAGTT TTTTCTAGTTGTAAAAAATAACTATTTTGTCTCTTTTCTTCCTTTCACAT TTCCAGGTTCAGAACAAATTTTTAGCATTATTTTGGTATTTCGACCATAA TTAGCATCAAACATCAGACACCAATTATTAATTTTATTCCTTATATTCGA GAAGGTCTATTAGAGTAGAGAGCGTGTTTCTCTCCTGTGTCAAGTTTCAC TTTATTGTATAGGTGAAAAGTTGAATCATGGCCTCTCTTTCGATCCTCCT AAGATAAGCTTTCAAATAAGTTCTTGAATGTTATAAATTTACCGTTCTTA TACAATATAACCACTCTCTTTCATTTTATCTTTCCATTTCAGTGAAAACA AAAAAATAATCAAAAATAAATAAATAATAGAAAAATGTCTAACAAAGATA ATGGGAACGTTCGAGATTTGTTCGGAGGGGCTTTAAGTTGCTTTTTTCCC ACAAATGCTTTGGACATGAGGTAAGTGATTATTCATCACCCGAAAAAAAT GCACCGTATTCCCTTCAATTAAGCACCGCGGCGCTCTTAAAATTTCAGTG CAGTGCACTTTAAAGGCTATATATATGGATGAAACTTGAAAATGCTCAAT ACTAAATTTTTGATTTTTCAACCTTTTTAATTCCTGAATATTCACGAGTT TGTAACGAATAACCCCTTAGATGTTCACAAAATTGACTTCACATCCCTGG TGTTGTCCGACATCCTCAACCGCAGAAGGAGGGAAGAAGGGTAGAGGATG ATGCCGGATAGGGAAATCGTTGCGCTTAGAATACACAATTGCCCCTGTGT CCACGATACAACCGAACCATGGTTTAATGGTGACATCAATCAAACAAGTG GGTAGAAAGCGTGCTTATTCAACGTCATAGTCTTGTATAGAGTATGGTAC CCAGTCCCCTCCACATGATCTCTGGTTGATTTAGGTGGGGGTATATTTAT CTACCAAGTGAATTTCAGTACTGAGTGGACATAGAACCAATACCTCCCAT CTGGGAGCCGATGCGCCTACAATTTCTTTCTCTTTCTGGAAAAGCCCTAG GATACAAGAACATATAGTTGACGCTCTCTAATCCGATTTTCAATGGGATT TTCAAAGTGACTTTCAATATTATTGAATAATGGAGCGTATCGAACAGTAG AACGTCGAATTAGAGAGCTTCAACTGTATATTTATTTAAACAGTGAAATT CGTGAAGTACCGAACAACCAAGAAGTGTTCCATCATCAGAAAACCGATCA AAGTATCATGTTTGATATCCTGGAATATCAAGATCAAGTACATGGGAGCG AGGCTATCAAGTAATTTTGTATTTTTCACGAAAACTTCAATCCTTATTAT TCTTTGCGAGCTACCGGGTGTGCCACAAAAAAGTTTCTCTCTTTGAAACT AATTTTCTCGAAATCTAAATATTTTAAAAGAACCATTTCTATTTCATTAG AGAAAAGAAAGATAAACTTACATTATGATGGGTCATTTATTGAATTCGAT TCATTAGATCAAAAGTTATGCTCAATTCAATAAAAAGGTTACTTTCAGAA AGTGCTCGAAAACGTAAAAAATCGCCCTATCCCTAGGGGCAGTAATTTTT TGTGGCACACCCTGTATTGAAGCTAACAGTGAGACGAGATCACAGATTTC TTACAGTTAGTGGACACTAAAGCGCAACGTGCATTCTTAATTATATCGAC ATTTTCTCAATNCCCTGTATTGAAGCTAACGGTGAGACGAGATCACAGAT TTCTTACAGTTAGTGGACACTAAAGCGCAACGTGCATTCTTAATTATATC GACATTTTCTCAATGCAACAGATATCATTACATGGACATTGCAGAAGTAA ATGATGCCAGTGAAGAAGCAGAAGTATTTTGATTATTGAGTATTTTTCAT CAATTTTAATTTTCTCAGCATATTCGATGGTTTTCCTATTTTGGTACCCT TTGCTCAGACTGTTATTGAAGACTCCAGGGTATTAAGGTGGGGTCTAAAT GCTTGCAACGTTACAAATCTGCCTCACAAGCTCATTTTGGGCTCAAAAGA AGCGTATAACTAAGTAGAATAAGATTCAGTCTAGGCAGATGTTTTATGAT TTAGAAATTTAGCGTAATTCGCAAAAAACCTTCATTTTGCTAGGGGGGGG GTACCAAGTTGTGTTACTGGACCAGTGCCGAAAAGTTGTACTTTCTTGTT TTTTGAGACCACCACCACTTAGTACCCTGGTACTAAGTTGAATTTACCCC TTAAAATAGGTTTACCACCCCTTAGTACCCGGTACAATCTTGATATCACC ATTGAGAAATGACACACCACTGTTAAGTACCCTGTACTAAGTTGATTTTC CCCCTCAAAATAGGTATACCACCCTTTAATTCTTAGTAATGGTACTTTCT GGTACACCTCCTTTAAATTTTCTAAAAAACATCAAACAATACCCGTTCAA GTACAGAAATCGGCCATACTCGCTTAAAAGTCTTCTACATAGTTTTTCAA GAGCTTTCAGATTCTATAATTGGTTTTGGCCTAAAATGAGTTCGAAATTT CCATAAAAAATGAGCTCTTGGGCTTTACCCTAGGTTTTCAATAAATGGGT CCAGAAATAACAACCCTTAAATATTTTCTGGGCCGCTCTTCTAATATCAA TCCACAGGGTATTAGGCATGTCTGGTCCAAGTTTAGTGCTTTGTTTCAAA TTTGCACGATAATTACACCGATCAGGCCTACTATGATAACACCCAGGGGA AAACAAAAATTTGATAAACAATAAACGTAATAAACATCCTAATAAAATGG TAAGAAATGAATATAGACTGCCTATAACAAGAATTTTTTTGTGATTTTTC AGGATTTTGAGTACCAGATACTAACTCGATGCCTCATATTTGGTATTGAG ACCACCATTTAGTCCCTTGATACAAAGTTGCAAAAATGTTTTTTTAAATT AGGACCACCACTTAGTACCATGTACTAAGTTGTTTTTTACTTACCTTATC AAACCACCACCCGGTACTGGCCCCCACAACTTAGTACCAACCCCCCCTGA TTTTGCGTAAATTTTTGCTATTTTGAGATGACGTCATAAAAATTTAAATT CTTATAACTTTTGATATAATAAATAATAATAAATAAATAAATAAATTGTA CCATCCCCTAAGGGGAATTGGCCTAAAAATTGTTAGGAAAAAAAAACTAA CAAATTTAGGATATTCATTGCGCTGCTAGGTAAAGAAAAAAATCAAGAAA TTATATTGCAAGCATCTCTCCAGTTGTTCCTGTCCATAGCGAGATTATAC CAGTTGTCTTTATCAATATTAGCCTTTTTAAGAGCTTTAAACAAAGAGCG ACCGTAAGTCATTTCGGGAGAACCCCGCGGTCGTTTTTCACTGACCCACG ACGAAATCATTTTCCTTGGTAGACGATTCATATCCATGCGTACAACATGG CCAGCCCATCTTAACTGCCTTTTAACAATATAAGAATCGATACATTTGAC ATCAAGACGATTAAACAAATTCTCATTCGAAATATGCTTTTCAAAAACAT CAATCATATTTACTCCACACATAGCTCTTACACATCTATTGTGAAAGGAG CGCAACCATCGATATAACTCCTCTGTCAGACACCAAGATTCTGATCCATA AAGTAGGATCGACAATATAAGGGATTCATAAACCTTCCCTTTCACTTTCA AATTTAATTTTACATTTCCGAAGATACATTTCTTCAACGAACCAAACATA TTTCCCGCTTTTTTAACTCGAAGTAGCACATCTTCTCGATCGGAACAATC GCCAGTGATAACAGATCCAAGATAGGTAAATCTATCTACGACAGGGAAGA AATAATTATCGGAATAAATTGAAATTTTGACCAAAAATGCACAATCCTGA CGTCATCATGCTTTTAAAAAAATTTTGAAATGTTTTTAAAATCTGCATAA AAATGCATCTTTGGTCAAAATATGAAATTATTTTGATGATTTTATCAAAA GTTATTAGAATTTCAATTTTTATGACGTCATCAAAATAGCGCAAAATTGA AGCTTTTTGCGAATTACGCTAAATTTCTAAATCATGAAACATCTGCCTAG ACTGAATCTTATTCAATTAGTTATACGCTTCTTTTGAGCCCAAAATGAGC TTGTGAGAAAGATTTTTAACGTTGCAAGAATTTTGACCTCAACGAACCCG CCTTATTACCCTGGAGGAGGAGTAGGGAGAGTATTTAAGAGAACTAAACA CCAGGGCTTTTCAAACTGCACATTATAACTTATCAAGTAATAAGGAACTA ACTTACAATTGCTACACGGTGTTTCCTGCTGGCGCAATCTTTATTTCAAT CCATTATAACTTATAATATAATATAAGTAGACATTTAGAATTATTCTCAA TACATCGGTGAGACAAATGAATCTTCTAGTTTCTCGATGTAATATCCTTT TCTTTCTCATAAATCGTGAGCTTCCAGTCAAAGTAAAGCTTTCTAAGAGC CATCTTTCCTGAATTTACCCATCACCTGTTTAGGTAAACTTTTTAATAAA TCAATGCGTTAACTAAACCCATAAATTTGGGTTTTTGGCTAAATGGTACG CATTTTCTTTTTAGATACTCTATGTTTCATTCCCTTCCCTTTAGGTGAAC ACTGTCGAAGAAATACCAAAAGAAAATTTGAGCATTAAAGAGTAAGTATA CTTTGCAAGCGCTCAATAAAAACACTGTCTCTCTGGGATTTTATTACCCC CGTTTGAACCTCTGGAGAGATTTGGTATTGACATGGTGAGGTGGAGTTCA GGGTCCAACTGTTGAAAATCGTTTAATAGTATAATGAGAAGAATCATGAA TATTCTTTCTTCGTTGTAGATGTTCACAAGCCTTGTTCTTGCTTGGCAGA CAAATGATCTCCAAATATAAAGAAGGGGTAAGAAAAATTTGTGTTATCGA TGATAGCTTGATGGAAGATTTGCAAGAGATGCCATAAATCCCGTATACTA TATATCCCACATTTTATCCCTCGGAATGCTAACAAACGTCTTTCAGTTGT TAAGCAATTTCTACCGTGACAGAGCCACGAGAAAACATAAAGGGATGCTT TTATTCAAAACTACTCTAAGGTCCCGAATAGACGTCCCGCTTATTAATTT TCGAAAACTTTTCGGACTCCCCCCCTCCCGTTTATTAATTTTCTAGTTTT TTGTTTTTGAGTTGAAGTGTAAATCAGGCTTAATCCATTTCGAACGTTCG AAAATGAAAATTCATAGAAGTAGGTAAAAGGAAACTTCTAAATATTTTCA GACCCCCCCGTTTATTCAGACCCCCCCNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCGTTTATTCAGAC CCCCCCGTTTATTATATTTTGCAAAAATTTCGGACCCCCCCTTTTATTCA GACCCCCCTACTATTCGGGACCTTAGAGTAGTCAAATACTCGTTCCTGAA GGCCTACTTGCAAATTCTAATAAGTGATTGCTCTGGATTGCTTGAATAGA ATCACTCTATAAAATTCAATTTCTCACAACTAAAAAGTCTTTTTTTAGTT CTTAGTATCATTGTTTGGGTTGCTGATGGCAAAGGCGAGCATTTAAATTT AGCAAAATTGTGTTATCTGTTTGAACGTCTAAGCGAAAGAAAAATCTTAT CAAAAATATTCTGATCGAATTTTGTTAATCCTTGTTGTTATTACTGCAGG CAGATGCAAAAAACTTGGTGAATATTTTGATGGTTTTGTATCGTCTACCT CAGTACGAAACTGATCTGTTGATTATCATGAACGACCCTGTTGCTATAAG GTACCTCTCTAATTCTTATTTTGACTTTTAAACCCAGCAGGCACACAACG TCGTTTCAACGTTCATCTAATGTTCACAACGTCATATAACGTTAGATGAA CGTTGTTACAACGTCGTGTGCTAGCTGGAAATGTATTTATAATTAATTCT CAATCATGTCATCAATTTTTACTTATCAGTGGGACTACAATCAGAGATAT CTGCTTATCTTTTGTCTTTCTTGCCTAAATGTGTGTCTGTATCCAAACTG TAGATAGACTGGATAATTAAAAAAATCTTTACTCTTTCCTAGACTGATGC CTGGGATACGAAAATAGTAGAATATAGGTCATTTCGATCATTTCAGAACC CATCATCCAACGTTATTGTCAACTTTTTTTCCCCCGTTTTTTTACAGTAC AAAAAGTAGTAGCAGTGGTAACAACACAACTCCAAACGATGCTTCTAAAT GGTCGGAAAAACTTTTCAAACAGATCGCTTGTTCACTCAAAATTGTTGAT TCCTCACTCTTTGGCTGATTGAAATGAAAGGTGGACTAAACTGGATGATG GTGTCGTTGTATTACAAAAATTACCCCTTCACTTCCTGGTATGAAAAAAC ATCTGAAAATGACGTTGATTCTTTAGCACGAAGCAACTGCATACTGTGTA AAATTGTCCGGAAAAAATGACATTATAATGGGACATCTGAAAACAAAAAC TTTTTTAAAAACGTAGGAAATTATAAGTGCTGCATAAAAGTCAAGTATAA GAGTTATATGGATGAGTTCGAGTTAAGTCGAGTTAAACTTGAGATTTGTA AAGTAGGAGCAGGGCTTTTCACCGTATGGTGTACTACATTTAGGGTTTAT GAGGAGAGAACCACCTTGCCAAAAAATTCGAAAAATTTTGAACTATAGAG CTTAAAATCAAGGAGAAATAATTGTACTATCGTGGTTTGGACAGAACTAC TAACATAATTTCATATTCTTACAAAATGTCTTTACATTTTACCACATACA GTACATTTAATTTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050465TCONS_00050465Clytia hemisphaericatranscript
TCONS_00050464TCONS_00050464Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050465-proteinTCONS_00050465-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_172supercontigscaffold_172:80849..88114 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RANGRFran guanine nucleotide release factor isoform A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.69 21.45 16.93 13.69 12.79 9.03 12.67 13.6 13.28 11.72 9.93 11.36 10.69 10.56 12.92 15.69 15.41 19.3 6.17 6.94 14.36 11.5 12.92 9.27 13.46 13.93 7.86 6.63 9.73 10.9