XLOC_031965 (gene) - C. hemisphaerica

Overview
NameXLOC_031965
Unique NameXLOC_031965
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_173:79086..85350-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031965 ID=XLOC_031965|Name=XLOC_031965|organism=Clytia hemisphaerica|type=gene|length=6265bp|location=Sequence derived from alignment at scaffold_173:79086..85350- (Clytia hemisphaerica)
ACAGAGGAGCTTATTTTGGAAGCTGTCACCTTAGTAACAGTTGAGGAAAG TCGCGTCCCTACCAACGAAGATATTTTATCCTTGGTACAGCTTGCAGAAA ATACCTCGTTGCTAGGAACAATGCTGCTAGAGGAAGCAGTCAACATCTCT AATGAAGTCACCTCCACCTCAAAGATTGGAAGTACGGAAAAATGTTCCTA AGTCAGATAATATAGCTTTGAAGGGGGGGTCCCAAAGAAGCAATTTATGG ACTCCAAAGATTTTTTTTGGACTTTTCCAAGGAGTTTCATTTATGTTTTT TTCAATGGGTTTCCTCCACCGGTATGGATTTTTAACTATTTTCAACATAA GGATTTTTTTATGCAAAATGTATTTCCATTTTGGTATTTACCATCCTATT CTCTTTAGAGCTCTCATACCAAGTAGAACTTCTCGTGTACGCCCATTACT GTTTCACCATTACGTGTGATATGGAGGGAATAGCCGGTGTTCTTCGCACC ACACAGCATTGTACCAAGAGGCTAGCCAAACGAAATCAATACAGTCTGAT GGTGAGATTGTTGACGGGGATTGGTCGTTTCCGTGAAATGTTCTACGTTA TCGAAACACTGTACAATCAACACCATTTTGAAGTTCTCTGTCGTAAAGGG AAAGGTGACGTCAAGGTGAGCGGATTACCTGATTTAAAGGTTTTGTTTTT AAATAAGAGTGATATCGTTTGCTTACTCATCAATTTTAATTTACAAGCTT TTCCACATTGAATTGGCACAGATGTGGTGCAATATTGGTCAGAAAGAGGA AAAAAGCACAATATAACAATAGAGAGACACTGTTCTGATCTGGAAAATGT GCCTGATATGAAACGTAAAAATAAAACTTTCAAGTTTCGCGAACGTTAGT TTGGCAGATTTTTGAACTTTTTGAACAAAATTTACGGGAAAAAACTTATG CGATTTAAAAAAAATATTTTCTTTTAACGGGGATAACTTTCTCGAATAGC TAAGGAAAGCGAATGGAAAATCCTTTCAAATTTTTTTTCTTCGATCGTAT CATTTTTATTGTCAATTGAAAAAAAACAACATTATAAAATGGAATCATGA AAAGTGAATGGTTTAGACTCTTCGTTGCCACCATTAGCGATAGCAACTGA AAAATTATTTTCGTGGATTCTCTACCATCAAGCATGATTCCATTGTCAAT TGCCGATTTTTTGCACAAAGATGCTGATTTTAGCAATGCCCAAAATNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTTTTTTTCAATGGGTTTCCTCCACCGGTAT GGATTTTTAATTATTTTCAACATAAGGATTTTTTTATGCAAAATGTATTT CCATTTTGGTATTTACCATCCTATTCTCTTTAGAGCTCTCATACCAAGTA GAACTTCTCGTGTACGCCCATTACTGTTTCACCATTACGTGTGATATGGA GGGAATAGCCGGTGTTCTTCGCACCACACAACATTGTACCAAGAGGCTAG CCAAACGAAATCAATACAGTCTGATGGTGAGATTGTTGACGGGGATTGGT CGTTTCCGTGAAATGTTCTACGTTATCGAAACGCTGTACAATCAACACCA TTTTGAAGTTCTCTGTCGTAAAGGGAAAGGTGACGTCAAGGTGAGCGGAT TACCTGATTTAAAGGTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTA CTCATCAATTTTAATTTACAAGCTTTTCCACATTGAATTGGCACAGATGT GGTGCAATATTGGTCAGAAAGAGGAAAAAAGCACAATATAACAATAGAGA GACACTGTTCTGATCTGGAAAATGTGTCTGATATGAAACGTAAAAATAAA ACTTTCAAGTTTCGCGAACGTTAGTTTGGCAGATTTTTGAACTTTTTGAT CAAAATTTACGGGAAAAAACTTGTGCGATTTAAAAAAAATAATTTCTTTT CACGGGGATAACTTTCTCGAATAGCTAAGGAAAGCGAATGGAAAATCCTT TCAAATTTTTTTTCTTCGATCGTATCATTTTTATTGTCAATTGAAAAAAA ACAACATTATAAAATGGAATCATGAAAAGTGAATGGTTTAGACTCTTCGT TGCCACCATTAGCGATAGCAACTGAAAAATTATTTTCGTGGATTCTCTAC CATCAAGCATGATTCCATTGTCAATTGCCGATTTTTTGCACAAAGATGCT GATTTTAGCAATGCCCAAAATCTGGCCGATTCGGATTTTTGAGAAAAAAT TTTTCCGGCCGAAAAGGGCGGAATTATGCCGGAAATCGCCGCTTCTGCAG ATTTTCATTGAACTTTTTCCTAATATTTCTTTGTGTTTTTTTTCTTCACA CAAAGACATTATTGATAATAGCAATTCCCACCATCAAGCATTATTCAATT GTCAATAAAACTGATCGTTCTTTTTTCACGATCTTTTCCATTATCCGATT ATTTCCATAAACTCGAACAATTCTTCCGGTGGCTTGATGACATTCTTAGG CTATTCTGCCTCTCTATAACTCGAATGTTTTCCAATATTATACTTCCCTA CTTGCTCTAACTTCATTCATCAGGTAGGTTCAATCATCGTTCCGGCTTGT TATAAAAGAGTCATTTTCTCTTCTTAATAGGAGAACCAATTGAAAATGGC TTTGTTAGACTTCATGAAACGTTATCATCCAGAAGATGTAGAAAACCTGA ACATGATCTCCGTTGGTTTCGGAATGTATCGCGAAGCGGCCGAACATCTA GAAAAACAAGGTCGTAAAGAAATTGAAAGAATCAAACATGATTTAAAATC AGGTGAGCGTTCACGTAATAACTTGAGTGCTAAGTTAGAAATGTCCTCTG TTTTGACAAAAAAAAAACCTTCATTTTTGTGGAAATGATACTAAAGTCTG TCTCGATATAATTTGCAGCCGAGACAAAAAAGGCTATAAATAACTTTTAA TAAAATTCCAATTAGATAGCGGTTTTGTACTCGTTGAAAAGACAAACAGG AGTGGCATTTTATCATAAAGAAAAAAACTCAAAAAAGATCAGAAAATGAA GAAGAAGAAAATTAACTTCTTCAATAATTCTATCAAAAGTTACAGCCTTT TTTGTCTGTGCTGCAAATTATATTGAGAAAGACTTTAATAAAATATTTTG AATATTCAGAATTTGTGTGGCGATAGTCAAATTCCTAATTATTTTGTCTC TTGAGATTCTATAAGACATTTCCATTAGGTATTTGAACTTCGAGGTTACT CTAATTTGTGGAACTTTGATGGGTATATTAGGCTTCTCCAGAAAAAAGTA TGGGGTTTTAAGGTTTGGAACATCTGGGGGGTATATAGGCATAAAAAAGG CTGCGTATCCAGGGGGTTACTCAATAGGTGTGGTGACTCTTGTAAATATC CAGGGGGTCGCATTGTGTGTTTCAATAAAAATGTTGAACATGTTCAAGTT GTATCCAGTAGTAGAGGTTTAAGCTATAGTTTGAAAGAACGAGTCAAGAT TCAATACTAAACCAGTTTTACACAAATTATATAGATCTTAAAGGAACATT AAAGTAGTACGCAAACTACGTGTCATTAAAGAAAATGATTAAAATCATGT GCCCAAAACAAACTTATAAAACAATTGAAACAATCAAAATCAGCTATATT TGTTTTGATTTTGTCCCGCTCCCGCTGCATACGGTTTGTTTTCAAATTTC GTCAGTACTTTTATGTCCCTTTAAAATTGGACGTTAAATAATATCCTCAT CAACCCCTATACAACTTTTTCTGGAAGAGCCCATTATTCTTCAGTCATGA GTTATTATTGTCTTTTTTAAGGTGCATCAAAAGAGGTGTCTAACACACTG GAAGAAATACGAAAAACTTTTTCATATGCTGCTGAAAATTATTCCAAAGT AAGTACTATAATAATGATATTGTGCATCAGAAAGTGAAAATGTTTGTGCT CAAGTGGCCTAGGGTCCACTTAAGGCTTTCGGGTGGACTGGGATGGCGCG ACTCAAGCGGCCCGGATCAATATGGCACCCATCACTCTTTTTACTTTGCC TTTGCACAACATAAAACCGTCAGTTAGATTTTATTTGTTTTTGGAAGGTA GAAAATGGACAGGGCAAAGTTCTTACATGTTTTTTTTTTCTATGCTAAAC ATAGCTCATTTGTTTAAGAACAATTGAATGCTTTGCATAGTGCGAGCCTG ATATAGGCGCAAATACTTGTATTTGAAAACAGGTTATTAAAAATCTGTTA TTCATGCTGGTTTCTCATCTCTTAATTATAATTTTCATCTTCTACTACAG TAAAATACTTCTTATGTTTTGAAAAAAATTTTCGTAAGCATATCACTAAG CATAATCTGAGGCTGAAAATAAAATTTTGCTAAGCATATTGAGCTTCGAC CCGATTTCCCCGTATGCCTATAAAAAAAAGAGTATATTGGCAGGGCCGCT GGCTTGAGGACTGAAGTGAGGGGGCCAAATATTGGAGTAAATTGGCNAAG AGTATATTGGCAGGGCCTCTGGCTTGAGGACTGAAGCGAGGGGGCCAAAT ATTGGAGTAGGGTAACGGAGCTATTTTAGGACGCATTTCGAGTCTTTTTG AAAATAATTTATTGAAAAGTAACTGAAAGTTTTCAGAATAGGCTTTCTCG GCAAAAAAAAAGTGAGGGGGTCATGGCCGCCCCTGCCCCGATGACGGGGA CCATGATTTGAAAGTTCTCACGAGTTATAACAAAATAATCGATTTCCGTT TTCAGGAGGAATGTCTTTATCTTGAGCAGAGCTGTACAAGACTGGCTCAT CTAGCAAAGCTGCAAATCCAACTTCTCCCTTCTGGTGTGCAAGTTTTAGG GCTAACCAAACTTCAAACACAAGAATTTTTAAATACACATCAAGATTTCG TTGAGGTACTGTTTTAGCATAAATCAGATCCTGGGGTGGGGAGTACTTAG GCAAATGGAGGGTAAGGTATGTGCCGCCCTTAAGGGTACCTTTTTGGATT TCCAAAGTCCCGCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050480TCONS_00050480Clytia hemisphaericatranscript
TCONS_00050479TCONS_00050479Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050479-proteinTCONS_00050479-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_173supercontigscaffold_173:79086..85350 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.28 4.25 1.03 1.55 8.5 6.31 7.65 10.56 8.24 9.11 10.24 7.25 6.6 9.01 9.94 11.14 12.79 9.14 9.2 7.95 8.17 9.26 8.91 9.43 10.41 10.84 5.62 5.8 8.72 7.12