XLOC_032059 (gene) - C. hemisphaerica

Overview
NameXLOC_032059
Unique NameXLOC_032059
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_18:79834..87794-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032059 ID=XLOC_032059|Name=XLOC_032059|organism=Clytia hemisphaerica|type=gene|length=7961bp|location=Sequence derived from alignment at scaffold_18:79834..87794- (Clytia hemisphaerica)
GAATTTTTAAAGGGTTTTTGCTAAATTTTTTATAATTTAACCCGTTTCTC TTTATCAGTTCAAAAACAAAATAATTCAAAAGAAATGTTAGAAAGAGACA CAGAAGTCAGCATTTGCGTCAAATACCTTCTGTTCTTCTTCAATGTTTTC TTCTGGGTAAGAATTTTCATTTTACTCAATCTTTGTTGATGGTTTTTTTT ACCAATAGTAAAAGCTCGCCGATAGTAAAAGTAGCACAGTGCGTAACCAT TTAGGCCCATTTAATGATATCGAAACTCATATATTTTAAGATTGTTGTCT TATTACGAGACCTTAAAAATGTATCAAGAGTTGACTAAGTTCGTATTTCA TACTCAGAGTTTCATGGCGTCTCTGAGCCAATCTTCAGTGAAATTGTAAT TAGTTCCAAGTCTAGACTATAAAATATACACTATAGAATGCTGAATTATT TTGTTTTAGTTACTTGGTGGTTTCCTTTTGGGAGTTGGACTATGGGCTCG CGTTGTATACGCACAAGAAAATGAATCTCTTGGCTTATTCGGTGGTTGGC ATTTAGATCCAGCTGTGCTTTTCATTATCGTGGGTGTGATCATGTTTTTA TTGGGGTTCTGTGGATGTATTGGTGCTTTGCGTGAGAATATCTGCTTGCT CAAATTCGTAAGTTTTTCATTTGTTTCAAATGTGATTTCTCTACGCTATC ACGAGGATTGAATTTAATTTACAAGTTTAAAAGTGTTGAAATCTGCCATC ATAGTATCCTTAAAAATACGTTAACAAGATTAGACACTTCCAATAAAACT CGACAAATTTTTATGGTCATTCTTCTTAATCTTAATGCAGAGAAAGTGCA AAGGGAAAAAATGATATTTAATTTTTTTTTATTATGATGATATATAAATG ACTCTTTAGAAAATTTACAAAATGTCAGTTCCTGTGGAAATCAATCCTAT ACAATATTTTGAGCTCCAAGGTTTGACTGATCTTTGCTAAAGACAGTAGA AATAGATTTGAAAGGTGATGTTTTCCTTGTTTACTTTTAGTTTACGATTT CATTATCGATCATTTTCTTCACTCAACTTGCTGGTGGAATCATTGGTTTT GTCTTCAGAGCTAAGGTAAAGTTTTCCGCATTTCTTTATGGTTGTAATAA CTCTAATAAATTCAACAGTATGCTGTTCTAAAGTTTCTGTCCAGCTAGTT ATTCTGTTACAGTTTTAATTTGATTTTTGCTTAGGTAATTACATACTTCA ATGAGCTATTGACGTTTTTAAACTCTTTAAGATTGTACGCGGTAATTCAG AAACATTTTCAACATCAGGGAAAATTTATTACGAAATTGATTTTCGATGA ATAATTGCAGGTGAAAGAACTGGTCAAGACGAAGTTACATGACACCATCG TCCACTATCGAGACAATGCAAACCTTCAAAATCTCATCGATTTTTCACAA GAAACTGTAAGTTCAAAAGGGTATCTTTTGTTTCAGAAAACAAACGAAAG CACAAAATAAAATGATGCGCTTTATTAAGAGCTTGTTGCTCGAAGATCGC GAGACAGAAATTCAACGTCAAATCGAATACACGTATTTCTTATGGTAGAT AGCAGATTCATGTAAAAAAGTTACACAAAAAGACGTAAAGTAAAGCTCTG ATTGGCTGATCATTCTTTTTCAAAATGTCCAGAGTATGAGGTAATCTTTG CATGTCTCAGTCAATTAATGCTTTACTCGACGTTTTTTCGTGACTTTTTT ATATGAATCGGTTTCGTGTTTTTCAATAAGAGCATCGAGAATTCACTCAT TATCTGATAAATTTTTCACGCTGTCTTTTTTTAGTTCAAATGCTGTGGTT TGGATAGCTACCAAGATTGGCAGCAAAATGCTTACTTCAATTGTACGCAG ATTGGACCAGAAGCTTGTTCTGTACCTTACTCCTGTTGCAAAACTGTAAG TTGATACACAGACCCGATGTCTACGGATAATTTCAAAATTCATTGCTGTA GAGGATCTGTTGTCACATGGTTTCAGCCCCCCCCTTAAAATAAGGGGTGA TTTAAAATTTAGAGAAAAACACAAAGGGCAAAAATGTTAAAAACTGAGAA ATAAGGGGGGACTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNATCATCAAAAACAGCAAGCAAACTTTTCTCTTGACACTTACCTTCTT TGCACATAAAAATACCAAAAAATGCAACCGTTTTCATCAAAACTCGTTAC GGAATTTAGAAATATGGTAAAAAAAGCTATTCCCATGTGGAATGATATTT TTGGAAAAGCTAAAAAAAAGTTTTGAAAATCTCAAAGAGAGGTTTCGATA TTATGTGTGTGCTATGTGAGAAAACTTTTGAAAAGATAGATCACTATTCC TCGACTAGTTGCCCAAAGAATTTGGGTCTGCATCGAGTTTGCTCGTGTTG GAAATGTTTCATGACTTGCAAATAAGATGGAGAAACTGTTGGTAAAATTT AAATAAGAAAAAAAACCACCAAAAAAAACAATAAAATTATGTTTTTGTCA TCTTGTCTTATTGATAGCTTGATTGCTGTTTTTAATGATTTTTTGAAATT TCGGCTTGGAAAAAAAGTCAGTTTTTTAAAAATAACTTTCGAACTACTTG TTCAAATTTAATGTATGATAGCTCAAAATTCAAGTTAGAACATCCTCTAT ACGATAAAAAAAGAATGAACAAAAAATTTTAATCCTGAAGCTCACAATAT CTCGATAAACCTGTATACTTTTTTTTGGTGCACCCGGTATTTTTGTTAAC ATTCGAAAACCTCCTTTTTTTCTTTTGTTTTTTCTTTCTTTTCAATTAAA AGAAGCTATTGTAACGTAAAATTTCTTTGTTCTTTTTTATATTGAAGAAA AAAAATGTCTTTGTTTTTATTATATAGTANNNNNNNNNNNNNNNNNNNNN NNNNNNNNAGAATAAGGGGACAAAAGTGTCCCCCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNGCAATTAACGATTAATTGCACTCCTCTAAACCAATCAGATTCGAGTAA TTTTGCACGGCTGACGATTATTCGTTTTAATTAAATGCTATACTTCGAAA TCACACGAACAGAGTAGATGGGTACTCCCAGCTACTGTTTTCATTGTCTT TTCTGGTTTGAAATTCATCAAACTGAACCCTGTGATGGAGTGTGGGTGAG AGAGGGGAGACGACGAGAGAAGTTTTGCTATTTTTAAATCATACTTAATA GCAGAGAATTCCTTACGGGAATTTTTATATCAAACAGACAATGCTCACAG AGTGTACTACGAAACGATAAACGTGAGAGATACAGTCTGATACAACATCA ACTCTTAAGGTCATTAAAAGTCTTAATGGATTTTCTAGTGCCCTCTAAGT ATGTCTCTCCCTTGGTATATACAAAATCAAAGTTTAATAAAGTTTTAAAA ATTAAAATCGTAGTTGTTTGACCTAGCAGATTTTATGATGAAAGGCTCTT TCTTTCGTTCAAAACCTTACATTTTATTTTCTTGGATCTAGAGCAGAAAT TGATTGAAGTCGTATCAACTTAATTTTATTACCCTTGATCTATCTAGGAC ATGTTAAATACGCAATGTGGATATGGTGTCAACAAAGCTTCAATGCCGGT AAACAAATTTGTTTCATCTATTACAACTCTCGTTATTATTCTTCATCTCA AATGTTCCTGGGTAGTTTTCTTAATTATTTGGGTTCTCTCAACAATCGTC ATTGTCCTTTGCTCGAACCCTGTTATTTTGGTACATTGTCGAAAGATCTG ATATCATCTTATTATTTTGCCCGTGTTTACAATTTTACCACATCAAACAG GCTTCAATGAGGTTCAAGCGGATATATACGGACGGATGTGTGGATGGGAT CACCGGATGGTTTTATGAACATATACAAGTTGTTGGAGGTTTAGCTGTCG GAGGAGCCGTCATGCAGGTCAGTGCTATTTGTTATTTCTTCTCTTCTATG AATAGACCTTTTTTACTGCATCTCCTTCATAGATCAATAATGTAATTAAA TTTGTTTTATTGATTTTTGGACCTACTTCGGAGGTCTTTTGATTTAATCT TCGTTCGTTCGTTTGTCCGCGCTCGTTCTTCTGTTTGTCCGTTCGTTTGT TCGTCCGTCGTTCTGATACTAGTTTTTCTGGAGCTTGGTTCATTAGGTTT TTTTTATGCACATAGATGCGAATTAGCAATACCCCAAAATATGACATAGT CCGATTTTTGAGTAATTTTTTTTTCAGCCGAAAATGCTGGAAATATGCCC GAATTCGCGACTTTTTCCATATATATTACTTTGTTTTTTTTGGACCTACC CCGGTGGGGTAGAGGTCCTATAAATTAACCTGTGTTCGTTCGTCCGTTCG TTCGTCTGTTACAAACTTTTCTCAGGATTTAATCATAGAAATCCTTTGAT TTTTGGTACAAAGGTGCAAAATAGTGGTGGGAAAAATGTGACGGAGTCCG GTTTTCAAAAAAAATTGGGGGGCAAATTTGGGCCAAAAAACGGATAAAAA ACGGGTTTTTTGGACTTTGAAAAATTGAATCATTAATTTTTTCAAAATGA TTTTTTGTATGAAAGTAGGGTACCATCAAAGGTAAAAGATGGCTCAAGAA GATTTTTGCAAAAAATTTTGTTGGCTCAAATAAAACGCATGTTTATCTAT AAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCA ATTTTTTTTATGAGATGGACAAATCCGACATTTCTTTATAAGCACATTAT CAATTACTTAGGTATTAGCTTTTCTCGAGATTGGTTCTTTCAATCTTTAT GATTTTTCGCACAAAGATGCATAATCATAAACCCTCGAATGTGACAGAGC CCGATTTTCAAAAAAAAAGATTTTGGGCAAATTTGGGCCAAAAAACGGCT AAAAAACGGATTTTTTGGATCATTAATTTTTTCTGATTTTTTGTTTGAAA GTAGGGTACCATCATAGGTAAAAGATGGCTCAAGAAGATTTTCGCAAAAA ATGCATGTTTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTC TTAGTCAAATTACTCAATAGTTTTTATGAGATAGATGTTTTTTTTTGCTC ACGAAGTCTTGAATATATGATGCATAACTATAAACCCCCGAATGTGACGG AGCTCGATTTTTGGGAAAAAATTTGTTGGGTAAATTTCAGCTAAAAAAAC GGCTAAAAAAAGGATTTTTTGGACTTATTGGAATTATTGGATCATTGCTT TTTCCTGATTTTTTGCATGAAAGTAGTTAAAAGATGGCTTAAGCTGATTT TTGTAGAAAAAAGAATTTTTCAGCTCAAAAAACGCATCTTTATCTATAAG AATCACTATCAATAAGCATACATCTATGTTCTTAGCCAAATTACTGAATT TTTTGATGAGATTGATATTTTTTTTTTTGCTCACGAAGTCTTGAATATAA AAAAATATTTCAAGAGCATCAATAAAACTGATTTTTACACCCGGAACTTT CTGAAAATTGCCGGAACAGCTGATTTTTTGCAGAAAGCGGTGGCTTTTTT ATACTATAGTTAAATAAGCCCGAGTTTATAGGGATGAAATAGAATAAACT TTGCAATAGTCTAGGTGCAGAAATTGTAGTCTCTTAGGCTAACTGTTTAT TTTTACNACTATAGTTAAATAAGCTCGAGTTTATAGGGATGAAATAGAAT AAACTTTGCAATAGTCTAGGTGCAGAAATTGTAGTCTCTTAGGCTAACTG TTTATTTTTACAGATCATTGTCATTGCGTTTGCTTCTTCAATGATCGCTG ATGTTCGTCGACAGAAAGCTAAATGGGAGACGCCAAGGAATCAATTCAAT GAACCATTATATCCTCTCAATATGTAAAGGTATTCATTACTGAAAACGAT GAAGAGTAAAGGTATTTTGAATTTCTTTTTCGGTTGAAAAAAAGTTTTTC CTTTATGTTCACTTTACATGGTTACCAAAGATTTTTGCGTATAATGCTGC AATAAAAAGAAATCGCAGGGGATGCGTGTTGTTAGTTTTTTTTGGTTGAG GGTCCAAATATAACAAAAATTTGGAGTGCCAAGGAGATAAACATCAAACA GATCACCGTTCTGTAAATTCTCTCAAACATGAAGTTTAAATTATTTTTCA AATCAAGAACTCGATGATAAATGAGAAAAGCTGGCGTATTCTTACAGTTA TTGAACATTTTTAAAATGACTTTCATTTGGTTAAATTCGCTGGATTTTGT TGTATATTCAAACAAATCAGTTTACTGGTTATCATTTTTTGGTTTCGCAC AAACTGCACTAACTAAAGAAATTAACCATCGAAGTGGAATGAGTGAACTT GACATTGTAGTTGTGTTAATTCTTCCTGTTAATAGGTCATTCCCACGCCC ATGTTTCGAGTCTAACTTATTTAGATTAGCCTGGGACTGGTCACCATTAG TGAGTTTAGCCAGGGGGGGGGTCAACATTTATAATACCAACCCATAGCCC AAAAACCTGACTTTTGACCTTTTGAGCTAAGTTAACACCACCACCCCAAA ATTGGTATCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050613TCONS_00050613Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050613-proteinTCONS_00050613-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:79834..87794 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TSPAN5tetraspanin-5 Homo Sapiens
TSPAN33tetraspanin-33 Homo Sapiens
TSPAN17tetraspanin-17 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.9 8.99 11.19 11.58 22.98 17.28 22.42 23.35 27.69 23.08 22.14 25.2 18.66 19.9 13.42 13.39 18.59 23.56 19.96 24.15 26.56 24.77 15.16 17.86 24.68 24.65 12.78 9.02 7.91 7.23