XLOC_032104 (gene) - C. hemisphaerica

Overview
NameXLOC_032104
Unique NameXLOC_032104
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_182:163107..166348-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032104 ID=XLOC_032104|Name=XLOC_032104|organism=Clytia hemisphaerica|type=gene|length=3242bp|location=Sequence derived from alignment at scaffold_182:163107..166348- (Clytia hemisphaerica)
AATTTAACGGAGATTGCACCTTGCTGCCGTGAAGCATTTGCAATTTATCT
AATCAACAAAGTCGAAGAAAATGTCAGAAGTCCTATAGCTCGGAATCGTC
CAGCTCAAATCTTGATCTCGTCAATCAGTAATAGCTCTGCAAACAAGAAG
AAGAAAGTACAGTACAATCATCTCCGTAAACTCTTATGGGATTTCGCCGA
AGATCCACAATCATCCTATCCTGCTTTGGTGTTTTATTTTCTCAGTTGTG
CTATAATTATCCTCTCCATCATCGTGAATTGTGTGGAGACCGTCAACTGT
CCGACTGATTATTGTTTGCCAGTGTCCGGAAATCTTGGCGCAAACACAAC
ATGTAATTATTCTCCCAAATGTGGTGATCTCTATTCATCGATTTTTTTCG
TACTAGACACTTTTTGCGTCGTCTATTTCTGTATTGAATACTTGATCCGG
CTCTATGGTGCCCCGAACCGAATTAACTTCATCAAAAGTAAAATGGGGCT
CATTGACTTATTAGCCATAATGCCTTATTTTGTTGATCTAGCAATACGGT
ACTATTTCACTGGTTTGGGTGCAGCTTCTAAATATGTTGAGATGCTACGC
TCTTTTCGTATTGTGCGAATAATCAAACTTGTCCGCCATTCAGAACGCCT
TAAAAATCTGGCGTCCGCCATTACAAGTTCAATATCAGAACTTGGTTTTA
TTTTGTTTATGTACTCGATTGTGGTGATTGTGTTTGCCAGTACGATCTTC
TACGCAGAGGCTGCCGGTAGACCACCTAAGGAATCAGTGTTTGGAAGCAT
CCCAGAAGCCATCTGGTACACAGTAGTCACAACTACAACTCTTGGGTAAG
ACCTCCCTGACTTGACACACACAACGTTGTTTGAACGTTCATCTAACGTT
ACATGGATGCTGTGAGCGTTAGAAAGACGTTGTTTTGATTTTGTGTGTCT
GAACATCCTACCTTCTTCGTTTCTATTGCCTAATTCAAGACTTAAGTTTT
AGAAATGAGTTGGGGAATACCTTTTTGCCGAAGTACCTGATGAGTAGATC
ATGGTCTGCATTATCAAATTTCTCCACAAAAAATTGAGAAACCATTCTTG
CAATCATTTCCGCTATTTTATGAACCTACAGCCTGCCTCGCAACATAAAT
TACTCTTATTACCAACCGACCGACCCCTATTCGCCATAGTTTTTTCCATA
TATATCTATACATTTCGATAAAAAGGGACGTATTGAGAAGGAGCATATTC
TTTTTGTACATTTTAAAGCAAAAATGGTCAGATTTTCATCCAAAATTTTG
CCTAAAAAGCTTCCTTATTCTCACTTTTTACGCCCTTACACTTTTTCTAT
CATTTCGATCCTTACAGTTGTAGACTAGCAAGCGTCTGTCTTTCCTTGGA
CACAGGAACGCGGGAATAGTGCTTATAATAATAAAGAGTTCTTATAAAAA
ATAGAAATTGCCGCGNTGGTAGACCACCTAAGGAATCAGTGTTTGGAAGC
ATCCCAGAAGCCATCTGGTACACAGTGGTCACAACTACAACTCTTGGGTA
AGACCTTCCTAACTTGACACACACAACGTTGTTTGAACGTTCATCTAACG
TTACATGGATGTTGTGAGCTTTAGAAAGACGTTGTTTTGATTTTGTGTGT
CTGAACATCCTACCTTCTTCGTTTCTATTGCCTAATTCAAGACTTAAGTT
TTAGAAATGAGTTGGGGAATACCTTTTTGCCGAAGTACCTGTTGAGTAGA
TCATGGTCTGCATTATCAAATTTCTCCACAAAAAATTGAGAAACCATTCT
TGCAATCATTTCCGATATTTTATGAACCTACAGCCTGCCTCGCAACATAA
ATTACTCTTATTACTAACCGACCGACCCCTATTCGCCATAGTTTTTCCAT
ATATATCTATACATTTCGATAAAAAGGGACGTATTGAGAAGGAGCATATT
CTTTTTGTACATTTTAAAGCAAAAATGGTCAGATTTTCATCCAAAATTTT
GCCTAAAAAGCTTCCTTATTCTCACTTTTTACGCCCTTACACTTTTTCTA
TCATTTCGATCCTTACAGTTGTAGACTAGCAAGCGTCTGTCTCTTCCTTG
GACACAGGAACGCGGGAATAGTGCTTATAATAATAAAGAGTTCTTATAAA
AAATAGAAATTGCCGCGGGAGAGTGTTTTGGTTGTATTCAGTGAACATAT
ATAGAAATAGATCCTATTGCAAGTTTAATCTGCAGCGAAATACAACGACG
TGGTTTACTAGTCTATACAGTTGCGCTCCAGGAAGCCTGAAAAACGTATC
CTCAAGATGCATAACCTTGAGTGCCTTCCCCAGGTCAATGACAACGTAGG
AAAAACCTTCTCCTCTTTCTTCTTTAGCTATGGAGATGTAGTACCGGAGA
CGATCCAAGGGAAATTGATTGGTTCATTGTGTTGTCTAATGGGTGTCATT
GTCATTGCCCTCCCTGTCCCCATCATTCAAATGAAGGTAGGGGAATTTAA
GGGATTTATTCATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGGTCCC
AAAATCACCAAAATTTTGTCTCTCAAAGGGTCGATTTTCGATTTTCGGCT
CGGACATACCCGTCACCTCGCAAACCTAGTACCCCCCCTCCCGGGGTAAA
AAGTCAACTGTTGTTAGGGTCGAATTTGAGAACACTTTTTTAATCATATT
GACAAAGTTTTAACAAGATTTTTAAGTTGTAATATACCGGCATCGTATGC
CGGTACCCCTTTTGCCCAAGTACCTCCTCCCTCCGCCAATGTATGTGATA
TTAATGTATAGTCAGGTATTTTATTGTTGTTTTTTCTCTCACACATTTAG
TCACAGACTCTAGTATCTGGAGATATTTGACCAGGACGAACTCAACTCAA
AATCGAAAACATTGCAAGTGAAAATTGCACGGAACTTTCATGGCCTCAGT
TGAGAAAACAGAATCAAAAATGAACACGAAGAGTGGGATTGTTATAAGTT
TATTGCAAGATGATTATTTTAAACGCCATAACAAATATTGTATTTTTATA
AATAATGAATGGATTTTTCGTTTTTTTAAATTACGTTTAATCTAATATAA
AATGTCTATACAAATATTTATTGCTGTAAAATGACCAAGGCTTAATTGGG
CAATGTGCCACAGGTCCCTGGCGTATTTCCTCAAATAAGCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050675TCONS_00050675Clytia hemisphaericatranscript
TCONS_00050674TCONS_00050674Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050675-proteinTCONS_00050675-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_182supercontigscaffold_182:163107..166348 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38	0.33	0.4	0.18	0.93	0.19	0.38	0.33	0.24	0.3	0.61	0.18	0.5	0.45	0.18	0.27	2.41	3.04	1.1	1.19	1.92	1.64	1	2.46	2.64	3.41	0.53	0.53	0.11	0.33