XLOC_033111 (gene) - C. hemisphaerica

Overview
NameXLOC_033111
Unique NameXLOC_033111
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_213:938475..947885-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033111 ID=XLOC_033111|Name=XLOC_033111|organism=Clytia hemisphaerica|type=gene|length=9411bp|location=Sequence derived from alignment at scaffold_213:938475..947885- (Clytia hemisphaerica)
ACATCTGCATCAGTTGCCCTTCCTGGTATCAAGCTTAAATCAGACATCAC AAGTAACTGCTAAGTAAGTAAGTAGTAATCTAACTTTAATTTTGAGGCAA CCTGATTTACAAGAAATGGACAATCCATGATGACTGATGCACAGTTTTGA ATTGGTTTACAGATTTGGTTTCTATAAGATTGGAGTTAAATTTCAGCGAT TGTTAAAAAGAATTTTATTTTGCTAACTTCTCTTTATGTTTTTAGATATC TATGACAAATAAATAAAAATATCAATAATTTGGTAATGTCATTAAGAAAA GGAGTATTATTGAGGTCACATAGAAAATCAATCAGCGAGATGGATATGAA AACAAGAAATGCAAACACCTTAGATGGAACATATACAAAGGAGAAGAAAG GTATTTTCATAACTATTGGTAGTAATTTATTACACTTATTTTAATATCCT GAATGCACTATACACATAGTATAAAACTATAGCATGCAAGGTTTTGTGTT CAATTGCTGGCTAGGGAATACCAAAGAATTCAAAATAGAACTTGATTTCT CACTGCTTTAAATGCTCATTAATTAAAGAGAAGCATCATCAGTGGTAAAT AAAGGAAGAAAGTATTGCGCCATTCCCTAGATATCCATGTAAAGAGGAGT CTTTGGGTCATCACTGGTAATAATGAATAAGGTTTTACACTTTTTTTCTT CCCTAGAAACAAAGAAAATCATTGAAAAGGATGAAGCCAGTCCTCAAAAA CAAAATAAACACAACAAAAGTAAAAGGAAATCAAAAGAAACCAAGAAACA ACATCAACAACAACAACAAAACAATAGAGAAACAAGCATTCCAATAGCAC AAAGTACGCTCATTCAAACACCAATTGCCACAGCTAAAGAGAAGAAACTA TCTATAAGCATGATCGATGCAAGTGATTTTTTGAAAATTGAAAATCNGTT GCCACAGCCAAAGAGAAGAAACTATCTATAAGCATGATCAATGAAAGTGG TATAGATTTTTTGAAAAATGAAAATCAAAATGAGAAAAAAAAGGTATGCG ATATTTTTAGTGTTTTTGATGCAACTTTCCAATCAATGGCCCTTTTTTCC TTTTTTAAAGTTTTCTTTTCTCTTTTTTCAAGTTGACTAGATCAAAAATT TTCACCTGCCTGATTTTTTGGCTTTTATTTCGATTTCATGCCTAGTGAAA AGACCAACTTTGTGAATTTCTTTTCTGTTGGGCCAGGGAGAAATTCTGTT CTAATAACACCAAAATGAGGATTGCATGTTCAGAATGCAAAAATGGGCGT TAAAAAAGGAAATCATAGATTTTCATATTTGAATAAAAAATGGACAAACA GTTAAGTTTGAGTTCCATCTGTTGATCGTGAATTTTTATTAAAATATTTA CTTCTTCAAGCTACAGTGGAAGCTCTCTAATTCGACGTTCTACTATTCGA TAAGCTCCCGTTTTCGATGAAAATTTGAAGTCCCTTGAAGGTTTTTCGCT CTCTTATTCGATTTCTAGCGTGTAAAAAGGCCTTTAGGACGGGAGTTCGA AATTCAAATTTTCGATTTTTTTGCGTTTGAATTATAATTTCGAAATTCGA TTCCTCAAAACTTTTCAAAACAGGCAAATATCGAAAGTATCTNTTATAAT TTCGAAATTCGATTCCTCAAAACTTTTCAAAACAGGCAAATATCGAAAGT TTTCTTCCGAAGAACTTAGGTTAGGTTCAGCAAGAACTTAGACATTTGTC CTGATTCGCGTTCAAACCAATCGAGTCTCGCTTATATTTTTCTTTCTCAG CTCTATAATTCGATATTTACCTCGTGTTTATCGGATTAGGGAGACTTCCT ACTATTCGATACGCTCCCGTATTCGATGAAAATCCGATTCCCCTTGAAAA TCGAATTAGAGAGCGTCAACTGTATATACTGAAGATGAAGAATTGAAATG AAATATTATAACTAACACTTTTTTTTTTTTAATATAAAGTATGAACATTC GAAGTCATGTATAATTTAATTTGTACTTTGGACTTTTCACATTCAAGTTT TAAAGATGATTTTCTACCGGTATCAGTAATTAGGTAATTAGGCTTCCTTT TCGACGGTATTACGGTATTTGACCCAAATTTTTGTCGGTATGACGGTATT TAAGACCCCTGAAAATTCAAAAACGTTCTAATAGGCGTCAATTTTCTTAG TCTTTTTTTCGTGGTGAGTCTCCGATTTTGACATCTAAAGCGGAAAAGCG GAAAAATGAATTTCCAGGAGTTACAAAAAAGGAGTTAAAATAGTTAAAAT ATATTCTCAACTTCAGTTGAGTTAGAATCTGAGAATGTGTGTGTGTGTGT CTGTGTGTCTGTCTGTGTGTATGTCCCAAAACTTTGGGGCAGCCTGGAGA CTTTAAAAATTGTTCGATTTGGCTGAAATTTGGCACACTTGTTCCTTGGG GGAATATCTGGAGGTTTTTTTTTTTATTTAGATTTTTGGGGCCTGGGCAA GAGTTTTTTGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTC AAAAATTGTTCGATTTGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAA TATCTGGGGGTATTTTTTTCATTTTTTGAAAATTTTGATTTTTGGGGCCT GGGCAAGAGTTTTTTGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGA GACTTCAAAAATTGTTCGATTTGGCTGAAATTTTGCACACTTGTTCCTTG GGTGAATATCTGGAGGTTTTTTTTTTTAATTTTTTGAAAATTTTGATTTT TGGGGCCTGGGCAAGAGTTTTTTGCCAAAACGAGGCTAAAACTTTGGGGC AGCCTGGAGACTTCAAAAATTGTTCAATTTGGCTGAAATTTTGCACACTT GTTCCTTGGGTGAATATCTGGGGATACTTTTTGCATTTTTCAAAATTTTT TGATTTTTGGGGCCTGGGAACGAGTTTTTTGCCAAAACGAGGCTAAAGCT TTGGAGCAGTCTACAGGCCTCCAAAATGATCGGATTTGGTTGAAATCTGG CACACTTATTCATTGGGTGAATATCTGGGGGTCTACAATTGGGCCTATGA ATGATTTGAAGCCACTGAAGTTGAGCCCAGTGCGTTGCGCACGTTCGACT ATTAATAAAGTCCCTTACCTTTCTCTAAATAGCTTGGACTTTTCCGAACC CTCCGTTTATTAGGCAGTAATAACAGAGCAATTAATTACATATTAGTAGA TTAGAGTAATAGATTGAGTGGCTCTGAAAAAAATAACTCTCACATCTTTA TCTCTTTCGTCGGCAGGTTTTTGAGACATTGCCAGACACAATTGAAGAAA TTGAAGAACTGATTTGTGAAGAAGAAGCAAGCCTGAATTGCCAATTTGAA ACTAACCCAGAGGTAGATCATCTTTTCTTTATCTNGATTAGTTTTTTCTG ATTTTTTGCACAAAGATGCATAGCTATAAACCCTCGAATGTGACGGAGCC CGATTTTCGGAAAAAAAATTTTTGGCCAAATTTGAGCCAAAAAACGGCTT AAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTGTTCT GATTTTTTGTATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCACG CAGATTTTTGCAAAAAAAATTTTTTGGCTCAAAAAACGCATGTTTATCTA TAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTC ATTTTTTTTATGAGATAGATTTTTTTTTGCCCACGAGGGCTTACTTTTGA AGAATATGTGTGTTTAGACATGAAATTTTGGCTACTTGCAGCGTGTTTTT ATAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATCAATTACT TAGGTATTAGCTTTTCTCGAGGTTCGCGCGTTCATTTTTTATGATTTTTT GCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCTCGATTTA TGAAAAAAGAATTTTTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAAA CGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCTGATTT TTTATATTTGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCAAGCAG ATTTTTGCAAAAAAAATTTGTTGGCTCAAAAAACGCACGTTTATCTATAA GAATCATTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCATT TTTTTATGAGATAGATGTTTTTTTGCTCATGAGGGCTTACTTTTGATGAA CATGTGTGTTTAGACATGAAATTTTGGCTGCTTGGCGTGTTTTTATAGAA AAACTGCCCAAATTCGATATTTTTTTACAAGCACATTATCAATTACTTAG GTATTAATTACTTAGGTAATTACTCTAGGTTGGCGCTTTCATTCTTTATG ATTTTTTGCACAAAGATGCATAACTACAAACCCTCGAATATGACGGAGCC TGATTTTCGGGAAAAAAATTTGGGCAAAATTGGGCCAAAAAACGGCTAAA AAACGGGTGTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGTATGT AAGTAGGGAAAAGATGGCTCAAGCAGATTTTTGTAAAAAACGAATTTATC AGCTCAAATAACGCACGTTTATCTATAAGAATCACTATTAATAAGCATAC ATCAATGTTCTTAGTCAAATTACTCAATTTTTTTTATGAGATAGATGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATTTTGGTTTCT AAACGCTTTTTTTATAAGAAACAAACGACTAATTTTAATAGATCGTCACT ATTTGTGTTCTGAATGATTGTTTAATGGTCACGCCCACTTATATATCAAT TATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTG TTATTTCTATAAAATGAAATATCTGATCTTTTCCTTCTTGATTTGCTCTT TCTGCTCAGGTTGTCTTCCTGGATTAAAATCAAAGAACAAAGTATCAACG ACTTCTACAACTTCCATTGACTAATAATTTCTGGATAGAATTAAGAGCTC TAGCTTATTTTAACTTCCTCTTAGTTAACCCGAAAAAATCCTCAATTAGT ACAGCCATTCGAACAAATTCCACTTACAGTTGAAATTGAGATCAGATCAG AGAGAGAGATGGGTGAATTTAAATTACTGTTTGAATAGACCTTAAAGTAA TCCATCTAGATGGGATCTGGATAAAAGGCATGACATGGAGGGAGGGCTTT CACGATTATCGGAGGACCTTTCTTGATCCTTTTTCTATACACAGCCTCGG AATTTGAAAATAAATATAACACGATAAAAAACAAAAAAGATTTTGATACA AAAATATATCACTCACGATTCACATCTTTATATATATGATAGTACCGTTT TCGTGTATCACCAGTCAAACAATACCAAAGCTCCCATACGATTTTTGTCT TGATTGTCTCATTTTCCGATGACTTACCTAAAGAAAAATTATTCAAAATA CAAGATTTTCACTAGTAGTCATTTAGAAAACGGGTGGGATTGAAATTTAA GACTGGGCTTCGGGTTTACTATAACCCTATAAAGTTGAAGAAAGGAGAAA TATTGAAGCACCCTCTAAGACCCTCTAACTACCATTGAACAATAAACCAT TGAAATCAAATGTGAAATGAACAAATTTGTAAAATTGCTCACTTTGAACA AAACACAAAGTGGAAAAGGAGTTTTGGAAAAACCCTTTACTCACAAATAA CAGTCAAACGACGAACGAATGAAATGATGTGAAAAACAACCATAAAAAGT CCCGTTGCTCACCAACATTCAAACAACAAATGAACAACGTTGGGGAAAAA ATTTTAATTGCCTGTTGTTCGTCAACACCACAAACAACGAGTGAACAACG CTAAAAATCATTTTTAAAAAGACGCTCGAACAACGAGTGAACAACAGTGT AAAAAAAGCTTCGAAAATAGCGTTGTTCACCGACACTTAAACAACGGGTG AACAACATAGGGGAAAAGCTTTGAGGAAAGCGTTGTTCACTGACATTCGA ACAACGGGTGAACGACAGCTTAAAAAAAAATTCGAAAAGAGCGTTGCTCA CCGACACTAGCCTATCGACTAAGTGTTGATTGCTAAAATGAACTTTATGA CTGTTGATCATCGACGGGTAACAACGGGTTTTCGACGCCTAGCGTCGATG ATCAACGACTAAACTACGCAGATGTCCCCGAGCGACGGATAATGGGTTAG CAGTGGAAGAAGTTCCACCGAGGCTGTAGAGACGGGTGATAAATTGATGA TATGTTTTTGGCAAACTCAAGATTTTCATGTATAAAATTTTTATATTTTT AGATGCCAGTATCTTCACAAGAGAACATTGATTCCTTGATGGAATATAAA TATAAAGTTGAACGACTGTGTGGTATACTTGGTCAATTTCAAGAACAACA TCATGAAGTTGTCAATAATTATCAAAAAGTAATCAAAGGTAAAATTTTCC TTACTGTTCCCGAATTATTATCCCTACAGAGCGGATTCAAACAGTGTGAG AGAAATGATGAATCGGATTTCCAAATTGGATGATCGAGAGACTAAANCAG GGGGGGTCAAGCCTCAGGGTACTAAAGCATAGCCGGTGGGGTGGGTGTTT TTCCAAAAAAAATTTGATAAGTACCCGGGTACTTTTTNNCAAGATAATTT AAGGGCTTTGAGACTTTAAGTATTGTTAAAAACCTGTGACATTTTTATTC TATCATTGGATGGTTAAAAATAAGTTACTTCTAGCATAAAATTTGACACG AAGAACAGATAAAAACACATTCTGCCATATAAAAATATCATCGATGAAAA GAAAGTTTTAAATTGTTTTATATTGTTGATGTAATATCAAAACATAAAAA GACCTGCCAAGAAAAAGAAATTTAGGGAAAAGTTTTGAAGTGAAAGTGAA AGCCAAGGTCCTGTTTTGTTTGTTTATAATGACTTCTCTAAGACATTCTG GGTGGGCACTCACAACAAAGCTCAATGAAGTATAACAAATGGAGTTTAGA TTAAAAGTGTTACAGATTCTCGTTTTCGATCGTTTTTAAAGTGAATTTTA CTTGGGTCTATTGCAACTGGTTATATTTAGTTTATATTAGTTTCTTATTT TATGTTTAGTTTTGCTAATTTACTCTGGTTTATACTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TGTTTTCATGTTTAAAAAATAAGGCAATCAATATACCCGAATGTATTACT GTAAATTACGCCTGGCTTATTAGTTGGGCTAATAGTAAAGGAAAATTAAA ATTAACTGTTATAAGGGTGGGTTTAATTTTGATGAGTGTAGAATTGAGAA AGATTATTAAGTAATAAATTTATTTTTTGTAGGTATAGGGTCTAAGAAGG AAAAGTCCTTAAGTACCCGGGTACTTTTTGGGTTGGTATGGGGTCTAGAA GAGAAAAGTCCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTATAGGGTCTAGAAG GGAAAAGTCATTAAGTACCCGGGTACTTATTTGGGTGGGTGGTATGAGTC AAAAATTTTTTTACATAAGTACCCTCTCTAGGCTATGCTTTAGTACCCTG AGGCTTGACCCCCCCCCCTGGTTCCCGAATTATTATCCCTACAGGAGAGC GGATTCAAATAGTGTGAGAGAAATGATGAATCGGATTTCCAAATTGGATG ATCGAGAGACTCAAAAAACCCATCAAAAGTATCTTTATTGTTTTAAAACT TTTTTTGTGAAGAACCCAGTTTCTACCTGGATTCTAAAACTGATAAATAA CTTGTGTGATTTTTTGGAAAGGCGACTTGGATCATTTTATTTTCAAAACT CTCTTGAGCTTGTTGGGGGAAAGCTACTATTGATGGGTATAATAAGGTAG TGCCCAATCGATTTAATTGTTTCCTTAAAATAAGGACTTTCATACCGTTA CTTGGTACTCTGATGTGGAAAGATGGCACTGTAGTATTTTCCTAATTAAA ACTCTGTACTTCAAACTAACTCTTTCTACAAACGAGAAAACAATGCCATT TAGAGATATTATTTTTGAGATATAAAGAAAGGAGATGCGTGGCACTTTGC TGGCTAAGCAGATTAAAGAAAAGAATAACTCTTGTTTCAAAAATGATGTG GAAGCAAATGGTAGGAGTTAAAAGATGTCCTTTAAAAAAGTAATATTCTT TTAGACAAGTAAAATTTTATTTAAAAATTTTTTTTTTTTAATTTTACTTG TCTAAAAACAACATGGCGATATCTCACTCAAAAAAGTAATAATTGTAATG TTTGAATTTCCTCTATTTTTTTTCACAGAAAACAAAGAATCAAGGGAGAA ATTGAACCTAACACTTTTCGAATTGGAATCCGATAAATACCTACTGCAGC AAAATGTTCAAGAACTGACAGAAGAAAACCTGAAGAAGAGCACCGAAATC GAATCATTAAAACAGAGAATAGAGGAATTGGAAAAAGAAAGAGCAGAGCA CATGGAAAATGAACAACAAAGGGAACGCGAGGAAACGGAACGACTGAAAG CTTTGAAATTGGAAAGGGAAAAAGAAGAAAAAGAAAAAGCGCAGAGAAAT ATTACAGGTTTGTGATTTGATTGANGCACATGGAAAAGGAACAACAAAGG GAACGCGAGGAAACGGAACGACTGAAAGCTTTGGAATTGGAAAGGGAAAA AGAGGAACAGGAAAGGAAAGAAAAAGAGGAAAAAGAAGAAAAAGAAAAAG CGCAGAGAAATATTACAGGTTTGTGATTTGATTGATTGATTGATTGATTG ATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGAT TGATTGATTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052374TCONS_00052374Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052374-proteinTCONS_00052374-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:938475..947885 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.98 11.09 11.09 8.58 62.41 51.21 18.54 21.52 13.86 13.87 11.31 11.62 4.78 5.6 6.74 10.38 11.75 12.37 3.78 2.95 6.7 6.62 11.78 12.07 37.75 35.65 3.9 2.24 10.24 8.51