XLOC_033822 (gene) - C. hemisphaerica

Overview
NameXLOC_033822
Unique NameXLOC_033822
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:1183248..1187052+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033822 ID=XLOC_033822|Name=XLOC_033822|organism=Clytia hemisphaerica|type=gene|length=3805bp|location=Sequence derived from alignment at scaffold_233:1183248..1187052+ (Clytia hemisphaerica)
TCAACATTTAAATGATTTGTTCTAAAAAGTTGTTAAAACGGTTTGAGAAA
TTCGAAACGTTCGTCTGAACCGGAAATTTAATCGACGCAGTTCAATCATC
TAAGAAAATTAGTTGTTTTATTCGATCATTTCTACACGAGAAAGAAAAGT
TTATGTTTTTATGTTTGTTGTGATTTGGAAGAATGATGAATGATAATATC
ACTCAAAAATTATTGCTATTGCAGCCGAAGCTGATCGACCCTACAAAATG
CAATACAAGCACATCACTGTACCAGCAGATCATCAAGAACAACCAAGCAA
CGTCAGAAAGACAGTCGAGAATGTTCAACTTGGGGAACACTCACCATACT
GAAAATCCGATAGAAGCAGCAGAATTCATCCTTGAGAGAGAATACGGAGA
CAGTTCACTGTTTCGTCAAGATGAGCACGCTTGTGTTTTCATTCCACCCA
CGTTCGTTTCAAATCAATACACGAAAAAGTCGGACGTCGCCATTCTCGAT
TATGAAGTTAAAAAAGACATTGAACGCCTGGCAGAGAACTTGAAAGAACA
TTCGCCTGACCATTGGCTGACCAGAGAGATACAAGCATTGTTAGAAACGC
AAAACGATGCCGAATGTATTGATAAAAGGACATTTGACCAATGGGCTTTG
AATATTCAAGTGATGTATCTGGTCGTCAGAGAGCTGAAAACTGATCACGT
GGTTTTACCGCCGGCGACAACTACAGAGCTAGTCGTTTTCGTCCAAGCCT
GTACAGAAAAGCTTATCCAGAACACGCCCATCGAAAAGTTTCTAAGAGAG
AGCCATACGAAAAAGACCTTCCGAAAGTTAATAAAACGAAAAATTGACAA
CGCGCCTTGTGAAGATTCGAACCTTCGTTGGCTTTTTGGATTGGAGTTGG
TAAATCTTGGAGAAAGACTTGAACATTGGTTCTACGATCAGCTTTTATCT
TTAAAGGGCGATGGTATTCTTAAGGACACGGTTGTACTCTCGTCCCTCGA
CTTCTTAACCAATATGGAAAGTAAAAATCACAAAGAGACAGactttctca
ttttttcatGGCCGAAGAAACTCGTCATTTCGGTTGAAATGAAAAGATCA
CTTGCAGACGAGAAAGTGTTCAAACAGTTAGATTCGAACCATCAGATATT
CGAAGAGAGTCTTGGTGACCTGTTGAGATCTGGCTGGACATTCTTTCCAA
CAGTCTGTGTTGAAATAGATACTCTCTCAATCAAAAGCGATCATTTTATC
ACAATGGATACCGAGATTAAACCATGGTTGAAGAATATCTTCGATAGCTT
CTCATCCTGCCAGACCGATATAAAACCAGCGCCTTTGGATGAAGTCAAAG
ATCTCTTAAAGATCCTGATATTCGCAATCCACGTTTCAAAGAAGGATTTG
GCTGCACCCATTACCACATCATCGTGGGTTAAATACACAAGCAACGCCAT
CGAAAACGTTTCGACTAGCCACAATATCCTGTTCTACTCGAATCAACAGT
TAGCTATAATGAACAACGACGATCCACGCTACAACAAAGTGGTGATCCGC
GGCCCATTTGGTGTGGGCAAGAGCCTCTTGCTCCAGCAGAAAGCCCTACA
ATTacatgaaaaaacaaaatatcgtGGCAAGTTACTGTATCTGGTTTGTC
GTCAAGGATACGTACCCCTGAAGCCCATGCTTCTCCAGCGTTTAAAGGTC
GAACTTCAAGACAAATATGGAATATTCGTAGGAGTTCTTACACCCAAATT
TTCGGTAAGTGCGACAATAAATTCGCCTcaacaaaacaattttaaacCAG
ACTAGAGTGTTCTAGAGTTTTGCAACCTTCGACTAATGGCTTTGACTTTG
ACTAAGGTATTTTTATTCTTAGAGGTATTTTTAAAAAGTGGCAATAAAAT
ACCTTCTGATTCCCTCAGACTTGATAACTAACttaattattgtttttatt
tttaaggcaAAGGCTTGTCAGGATCGCCAGGCTATCTTGGATAAAATCAA
AGACCGCGACATCAAAGCAGTATTTATAGACGAATGCGATTTGTTGTCAA
GTCTCTCATCTTGGTTAGATAAAGTGACGGTAATCGTTGAATATCTGTGG
ATAGCCCCTTCTACAgattctttgaaagattttcacaAACAAGATAATTT
GACTGGCTTCCAGGTCCTAGATCTGTCGCAGAACTTTAGAAACAGTCGAG
AAATCGTCAAATCAGCCAAATCAATCGCCGAATCAAGCGAATATCGATAT
AACCAAGGCATCATTATGCCACCTGAGAACTTCCCTAGCGGCTGCACACC
GATCTTTGCGGAAACCTTCGAAGAGGGTTTAAGGGAGGCACGAAAACGAA
CGAGTGAAGGAATCCTGGTGATAGATGATAAACCAGACGAAGCAAATTCC
AACATTCTAGACCAGTTGAACGAAACGTGGAAAGGATATCACGAGTGGAG
ATACGATTTTAAAAACGGAGGAAATCCATACAAGTTTCTCCAAGAAGGCA
ACGTACTGATTGTTTCTGAATTCACGTCTTTTGGCTTCGAGTGGCCGACA
GTGATTGTGGTTGAAACTATAAGAGCAGGAGGCAGTATAGCGTTACACGA
TTGTAACTACGCATTGAGATGTACCACGAATCTCATCATTGTTAAGAGAA
CTTACGATGGCGACGAGGACAGTGATTGAAAACAAATTCAACGAACTgga
ataatttaaaaataaaatctacacAATAATATTTTCACAGTACCATTTTG
TTGTAAATCGCCATTATGTTATAgatacagttgatgctctttAATTCGAA
GCTCTACTactcgatacgctccattattcgataatattgaaagtcaccgt
caacaaggaACTCTTATTAACTACGCTCTTCTATTCGATTCGTTGAAAAT
CCCCTTGAAGATCAGATTAGAGAGTATCATCTATACATTTTAATGGGGAT
GATATCAATATCGATTTTTTTATGATAAGTTAAGTATGCtgtatattttg
aaattagtcGTGTGTAAAGAAGGCAATGTAattattttaagtatttttga
gaaaatccacaggaatttaaattaaaaaagccAACATCCTCAAAAAAATC
AGTCCACTTTTTGACAAGAAGTTATCAGTAGTTGGGTACACAACTTACTT
CGATTTTCTGCGAAAGAGCATCATTCTGTTGCATCAAGGCTTTGTTATTG
TTCAGTGATTCCTCATACAACAGTTGCACGCGATCATGCTCGAAAGCTTT
CATTTTGAAGTCGTTGTGGACGTCTGATACTTTACTGTCAGAACTGATTT
GCAACTGGCGAAATCTAAAAAATAGTTAAACGGTTCACCGTCaataattt
ggtcaaattttgagAATTAGAAACTCCATTTTTGGCAAAGAATGAAAAGT
ATGAAGTTATCTTGAATTAAGATGCCTAAGCAAATTAGTCCACGAGAACG
TATTTGCAACTGTAGCAGTCAAATCCCATTTGATGTCATGGTGGTATGAA
AGGAGGGGTCAGATCTCCTTTCCGAGCACAAAATGTAATATAAAAATATG
TTATTGAAAGTTTAAATAAATCACTTACTCTCCTAGAAGTTCATtgtatt
tgatttgattgttcttTTCGTTGTTGAGGAGACGTTCTTGCTCCAAAAGA
GCAGTGTTTCTTGCTTCAACTAATCCCCTGTTTTCTCGTTCGTACATCGC
CTTCATGTTTTCCTTGATTCGATCTAGTTCTGTATTCGTTTTATTCGATA
GTTCGTCTATTTCTCTTTTCATTCGTTCTTCGTACTCTTGCTTATAGCGT
TCCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053601TCONS_00053601Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053601-proteinTCONS_00053601-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:1183248..1187052 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27	0.14	1.31	1.46	4.89	3.68	1.83	1.97	1.19	1.57	1.17	1.33	2.66	2.47	0.88	1.14	3.15	6.81	2.54	3.47	0.34	0.29	0.21	0.39	0.6	0.53	0.54	0.08	0.53	0.55