XLOC_033872 (gene) - C. hemisphaerica

Overview
NameXLOC_033872
Unique NameXLOC_033872
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:1393736..1401371-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033872 ID=XLOC_033872|Name=XLOC_033872|organism=Clytia hemisphaerica|type=gene|length=7636bp|location=Sequence derived from alignment at scaffold_233:1393736..1401371- (Clytia hemisphaerica)
GCCAGCAGCGTCATTGCTCTTGGATTTTGACAAAAGTCAGGCGATTTTTC
TTCAATCTAATTATCATGATATCTTATGTTTTAGTTGTTTTTGGACTTGC
AGGTAAAATTTATTTCAAGTTATATACACGTTTTGTTATAATAACATCCG
AAAGCATTTAGTTTTAAGCCTAAAAATGTTCTTTCTTTTTCACCATTTGT
CAATGTTTTAAGTGATTACCTAAGGAATTTGATGTTTTAGAGTCCATTAA
GATTCAAAATTTTCTTAAAGTTGTTCTTATAAAGTTTGCTCTTATAAAAA
ACGTGTTGTCTTTGATTTGAAAACTGCTTGTTTGAAACATCTTCACTTTT
TCACATCACCTTGTGTTTACCCAGCTGGCACAACTTTTTTTCGACGTTTA
TCTAACGTTCCCAACGTCCGTAATACGTTAGATGAACACGTTGAAACAAC
GTTTTGTGCCTGCTGGGCAACAACTCTTAAGCTAGTCCAAAAATCATTGT
CCGTTCAATGTGATACATTATACTCTTGCAAGCGTATGATAAAAAGTAAT
ACCTCGTTGGAACGATTATTTTGAGCGGATTATTTTAAGGTTATTTAAAT
GTAAGGCTTTTATTTAAGAAAAAAATGAAGATGAATTTTTTTTTTTTCTG
AATTTAAATCGGTAAAATGGAGGAGTGTAATTTTTTTGTCCCAAGAAAGA
TAAATAAACAAATCTGAATATACAAATTCAAATCAAATTTGAAAAGTGTA
AATTCAAGTTCATAGCATTTTTGTCATTTCGATAGTTTAAAGCCTGCAAA
GCCTTTAAATGTTCTTAACTTGTTCTTAAGATGTTTGGCTATTGAAGCCT
GTTTTTATATAGTTTGTTCTTATAAAAAACGTGCATCGTTCCAACTAGGT
GTTACTTTTTTTTTCCTTCAAAAAGTGTCGATTTTTTTGAATTACCAAAA
AGGTGTTCTTTTTGATTGAAACTGGTAAATGTCACGAAAAACAGGGAGTT
TCTAAACATCGACCAGAAATGGCGACCACGACCAGCGACCACGACCGGCG
ACCAGATAAATTTGGGTTATGAGTTTATCTAGAATACTAAAAAGTGACCT
TTGAAGTAACCAGTCATTTTCTTGACAAAGTGACACGATTTGACAAAAAT
ATTGACAGAGCCATTAAGTATGATGTCTCAATCAGTTGTTACACTGAATT
TTTTGATTATGCTGAATGGGATGCCTTTAGTATGAAAAGATATAACTTGC
CAGTAGGAAAAAATTGGAAAGGCTAGTTTTAGAGATATGAATCGAATCAA
TTATTCTATTGTCTTTATGCTGACAAAATGAATAATTTCGACAGAAATAA
CAATCTGATGATGAAATACAAAGCTTCTCAAACCAATTTCAAAAAATTTT
ATGTCGCTAATTATTTTGATGCTGATAATACAAAAGGATAGGAATTGACA
CCATAATCAAGCTCCAAGAGCGTCGAAATGGTTGTTTTACGTATATGGAA
TGTGGCTCTAAATAGATGAGATGGGGTGAGCTTACTCTTCAATATGATAT
ATTCAAATGATAGGGAGAGACACTCTACGTTGGTGAAAGAGAAAAAACTT
GATAATCCAAACTTCGCTGGTCGTGGTCGCCATTTCTGGTCGATGTTTAG
AAACTCCCCGAAAAACATCATTACTCTTTATAAATTTTGGCTGAGGCTCG
ATTGCTCTTATTTTTTCGTGATTCCCAGACTTAAATGCTCTGAAATGTCA
TTAAAAATTAGATTAGTTCGTTAGATTGTTTTTAATTCGTTTATAAATTT
ACTTTTGCCAAAATTGGGCCTCATATTCTTATAAAAGAGCTTATATTTCA
AATTTTAGTGGTAACTGGAGTCCCAACAACAACAGTCAACCATGAGGTGT
CAACAACGACTGTCATCACTTCAACCATCACTAATCGAACCACGTCTATA
CAAACAATCACTTCGTCAGATAATCAACCAAATGAAATTATTTCTAGTTC
AGGTATCTATCAGTGCATTCCATGTCAAAGACCAGTTGCCCCCACTGCTC
CACTGGAAAATTCGGCCAAAATTTCAGTCCACGGTGGGAAAATGTTCTAC
AATTTCAGCCCTGCTGGCAAATTGACTTTGTTTTTATCTCCATTTATAAT
TCAATGGAAAAAATTGCACTCCAAACCATGCTTTATTGGATTATCGAGCT
GGAAGCAATAGAACTTCTATCAACAGAAATCGATAGAAATTTTCATCCGC
TTTACATACAGGGTGGCTCAAAAAAGTGATGGTTTGATGTAAAACCCATT
TCATTGATTCACCTAAGATTGGTATAGTCTTAGAACCTTTATAAGGGATC
GGGGTCGTGGTCGGTCGTATTATAGTATCACAATGGGGTGACATCGATGG
ACGATCTCATATGTACATCAGAACCGAATTCTTGTACTAGAAATTTTATT
TGTGCTAGCCTTTGTTATATTTTTTATATATTCTCAAGAAATTTTTCTAG
CTCAAAATTTCCGAGGTATTATTGATACAAACCATAAGCCTCGAAGTAAG
GAAAATAGTCTTATATGAAAGCTAAAACTATTTAGTTTAGAACATGGTTA
AATTCTTATTCAAAGGTGATCTTGTGGTATTCAACAATTCCACTTACTTC
TTTGGAACATCACATAAAAATTGGCATAATGCAGAGAAAGATTGTGTTTC
ACGTGGTGGACATCTTACAAGTATTCACTCGCATGAAGAAAACGAATTTC
TACTAAATGAAGCAATTACAAGGTAAATTTCGAAAATTTGATTTTATTTA
GTTATAATTTAATTTTTTATAAATTTTTTATTTGCTGATAAGATCGAGGC
AACGCCATGTAATTTCTATTGACAACAAACAAAGTTTTTCATTCAATTTT
CAGAAATATTGGCTTTTACTGGGTTGGTGGAGAGAGAAAGGGCAACGAAT
TTTTCTGGTCAGATGGGACAGAGAGAGACTATCATTTTTGGCCAAAAACA
GAGCCTAATAATCTTTGTGGGGTTGAAAATTGTGCTGAGATAAGATTACG
CCGGATGGGTAACGATGCACGTTGCAATGAAAAGCGGTCCTATGTTTGTA
AAATCAACAGTAAGTTTGTTTATTTTTAATTCGCACCAACCTTTAAAACA
TATCACAACCAGACTAGATTTAACTCCCTAAAAATAATTAAACTTATGGC
CTTCTTTCTAACTGGACTTTTTCAGCTTGAAAGAATGGAACCTGAAATTT
CCATCAAAATAAGAAATTTTCCTACATCATTTACATTTGTCTCCTTCATT
TTATCCTCACTGGTTAGAAAATTATTACCTGTCCACCTAAGAGTGGACGC
GACCTTTCAAAACCTTCGTTATACATCTAATAAGTCTAATTTTAGTTATG
CTTAGTAGTTTAAGTTTAAGTTTTATTACTACTTTACCATTTCAAAATTA
CAGAAACAAACATGAAAGCGCTATCAATCGTAAACATAGCAACTGTTACC
AAGGCTACCTCCGATAACACTGTCACCTTGACGACAACATCAACTACTGT
ATCAACACAGATTTACCCCGAAAGTTTCTTTTCAGAATCAAGTAAGTTTC
CTGTAGCCTTGCCAGTCGTGATTTCTACTTTTGAATAATCGTTAATTTTC
TCTGGAAATTTCCCCCAGGGAAAAGTGCCCGATTCAAAACGACCATACGT
GCGGCCCAAAATTTGGCCTTTGAAAACGGACCCTTACAGTGATGAGAAAA
TTTTGCAAAATTTGTGCAAATTTGAGCGAAAAATCGACCCTCACGGTGCA
TTTTCTTGCAATTACCATTTCAGGCAAAATATGGTTGGATTTTCGAACTT
TTACACCCATAGAGTGTAATTTTTCTCATCTTTGCTCATTTTGACCCTTA
CAGTGCACTTTGAGAAGCTTGGGAAATATACCCTTAAGAGCCGCACGTAT
GGTAGGTCATTTACCTTGGGTGCTCCCCCCGGAAATTTCCTACATTTGTA
TTGAGAAAGTCCAGACGACCACCGATGTTCAAGTTTTATGGAAAAATCAA
TCTTAAACACTGATTTTCTTCTACAAAAATCTTTTCGCTCTCTTTCCCTC
AAATAACTGGACACCCCTGCTTCAGTGACCTGGTGACATTTTAAAACGCA
CCGAGGTGACTATGAAAATAGTAAAATTTCACCCGGTCTGGAATTTATTA
CCAGGTTGACTTACATGATGTAATTAATGATCGGGGTATTACCATAAATT
TCTAAATACCAAGGAGCAAAATTTTGATTGATTTTGACGGGGTTCATTGT
TATTCCAATGGGCCTTAAAATTAAGCCATTTTTTGAAATGTTCTCACCGG
GTCATCCACTGGAGCGGGTCATTGATACAGGGGTGTTTTATACTACAGGT
GGAATACAAAACAAAGTGACTTACTACTTTGGAAAATCACGTAAAAATTG
GCATGATGCAGAGAAAGATTGTGTTTCACGCGGCGGACATCTTACAAGTA
TTCACTCGCATGAAGAAAACGAATTTCTGAAAAAAGAATTGAAATCGAGG
TACAACTTCATTCCTCTTTTGGGAATATTAATTTTCTCATTTCATTTCAC
CAAATCTCTATCAAAAAATGGAGTTTCTAAACATCGACCAGAAATGGCGA
CCACGACCAGCGACCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAATTCATTTAGGAAG
CTTTATATTTGATCATCAGATCATTATTTTGTCAAAATAAGTCATTTTGA
CAATGTAAGGACAATAGAATAATTGATGAGATTGATACCTCTAAAACTGC
CCTTCCCAGCTTTTGCCTACTGACAATTTCTGTCTATTCATACTAAAGAC
ATCTCATTCAGCATAATTAAAATATTTGGTGTAATAAAGTTTACAGGCAT
CACACTTAATTGCCCTGTCGATATTTTTGTCAAAAAGTGTCACTTTGTCT
AGAAAATGACTGGTAATGTCAAAGGTCACTTTTAGTATTCTAAGCTAGAG
TAATTCTCAGCCACGTGCTCAGTGGTTTATTTGAAAGCCACATCAGGACT
CGATTTGGATATTCTCTACGGTGGAGAGAGCAGATAAACATCAAAAAATG
TGGTTTTATCAAGAACAATTCAACGAAAAAAAAATGCTTCTGTATTATTA
ACCTGAATAGATAGTATGGCTTAATTTCATATCAATCGCTACGGTTCCCA
TGGATTTATATAATTTAATCGATTTTTATGTTGAAGAAAAAAATCTCCCA
CATGCTTCTTTTAGAGGCTATTTATCCTATGTCTGGATTGGTGGTGGTCA
ACAGAAGGATAACGCCTGGTCATGGACAAATAACTCAACAAAGAACTTTT
CTCTCGTTAACACCTGCCAGAAACCAATACCAAGCAACAAATGTTTTTCA
ATGTATCATGTAAGTTTCCATTGGGAGCGTATTCCTTGTGCAACTGCTGT
ATCGTTTTATATCTGTAAATTGGACGTTAGTAACTGGGCTCAATTGCCAC
AAATGATAACCACCAACCCTACAACAGAACCTTTATCGACAATTTCAACC
ATTCAAACCTCTCTGTCACCAAATGATAACGCGACAACAACAAATAAACC
TTTAACAAATGGAACAGAAAACGCGACAACAACAATTAAACCTTTAACAA
ATGCAACAGATAACGGGACAACAACAATCGAACCTTCGACAAATGCAACA
GATAACGCGACAACAACAATTAAACCTTCAACAAATGCAACAGATAACGC
GACAACAACAATTAAACCTTTAACAAATGGAACAGATAACGCGACAACAA
CAATCGAACCTTCAACAAATGCAACAATCGAACCTTCAACAAATGCAACA
GATAACGCGACAACAACAATTAAACTTTCAACAAATGCAACAGATAACGG
GACAACAACAATTAAACCTTCAACAAATGCAACAGAGGACGCGACAACGA
CAATTAAACCTTCAACAAATGCAACAGATAACGCGACAACAACAATTAAA
CCTTTAACAAATGGAACAGAAAACGCGACAACGACAATTAAACCTTCAAC
AAATGCAACAGATAACGCAACAACAACAATCGAACCTTCGACAAATACAA
CAGATAACGCGACAACAACAATTAAACCTTTAACAAATCCAACAGATAAC
GCGACAACAACAATCGAACCTTCAACAAATGCAACATATAACACGACAAC
AACAATTAAACCTTTAACAAATGCAACAGATAACGCGACAACAACAATCG
AACCTTCAACAAATGCAACAGATAACGCGACAACAACAATGAAACCTGCA
ACAAATGCAACAGATAACGCAACAACGACAATCGAACCTTCAACAAATAC
AACAGATAACGCGACAACAACAATCGAACCTTCAACAAATGCAACAGATA
ACGCGACAACAACAATTAAACCTTTAACAAGTGCAACAGATAACGCGACA
GCAACAATCGAACCTTCAACAAATGCAACATATAACACGACAACAACAAT
TAAATCTTTAACAAATGCAACAGATAACGCGACAACAACAATCGAACCTT
CAACAAATGCAACAGATAACGCGACAACAAAAATGAAACCTGCAACAAAT
GCAACAGAAAACGCGACAACAACAAATAAACCTTTAACAAATGGAACAGA
AAACGCGACAACAACAATTAAACCTTTAACAAATGCAACAGATAACGCGA
CAACGACAATTAAACCTTCAACAAATGCAACAGAAAACGCGACAACAACA
AATAAACCTTTAACAAATGGAACAGAAAACGCGACAACAACAATTAAACC
TTTAACAAATGCAACAGATAACGCGACAACGACAATTAAACCTTCAACAA
ATGCAACAGATAACGCGACAACAACAATCGAACCTGCAACAAATGCAACA
GAAAACGCGACAACAACAAATAAACCTTTAACAAATGGAACAGAAAACGC
GACAACAACAATTAAACCTTTAACAAATGCAACAGATAACGCGACAACGA
CAATTAAACCTTCAACAAATACAACAGATAACGCGACAACAACAATGAAA
CCTGCAACAAATGCAACAGAAAACGCGACAACAACAAATAAACCTTTAAC
AAATGGAACAGAAAACGCGACAACAACAAATAAACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053707TCONS_00053707Clytia hemisphaericatranscript
TCONS_00053706TCONS_00053706Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053707-proteinTCONS_00053707-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:1393736..1401371 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.19	0.1	0.05	0.19	0.09	0.34	0.42	0.24	0.25	0.21	0.47	2.45	1.9	0.59	1.4	0.32	3.3	0.39	0.37	0.55	0.42	0.02	0.13	0.97	0.84	0.09	0.08	0.04	0