XLOC_036068 (gene) - C. hemisphaerica

Overview
NameXLOC_036068
Unique NameXLOC_036068
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_286:502226..507435-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036068 ID=XLOC_036068|Name=XLOC_036068|organism=Clytia hemisphaerica|type=gene|length=5210bp|location=Sequence derived from alignment at scaffold_286:502226..507435- (Clytia hemisphaerica)
ATGAAAACACATAATTAATCTGCTGAACAATCAATCTGTTTGTTCAAAGG GAATTTCCACACGATATGATATTTTCCCCTATAGATTAAAAAAAGAGTAT AAAAGATGGTTATTGCTGTCAGTTTTTATTTTAACTGACTTGCAAATAGC TAAGGAACGAAAAAAACCTGTACATATTATTTTTAAGTGTACAGAATATA GAAAAATATTAATATTATTAAACTGTTTCAATATGGGTAGTATGTTTGAA AACAATGCTTTTGTTGAATACTCAAATATAACACAAAAGAAAAATTTAGC AACAAAAGTGACGAGTGGTGGAGATAAAATTTCGAAATGGAAAGAGTCAG GGTTTGCACCTCTTTTATCAAAAGCTCAATACATCTGCAGCTTGTGTACC ATGTATATGCTTCAATCTATCGTACAAACCTTCCGTGGATCACTGGCTTG TGAAGATTGCTACAGACAAGGACTAAAGTAAGAAAAATGATACTTTATTT TTTATGCTTTTATCATAGATGGTAAAAATGGCTTCAGTTTGAAATAGAGT AAGATAGTCTTATAGGTTTTATTTTTACATAAGTATTCCCGTTTCACATC AGACACATATTTCATATCAGGACAGTGTCTTCCTATTGTTACATTATGCT GATATAAACAAAAAAATGATAAAGAAAATATTAATAAAAACATTTTTTTG CTTATATCAGCACAATATAACAATAGGCAGACCTTGTCCTGATATGAAAT ATGTGTCTGATATGAAACAGGAAAACTTGTAAAAATATTGCCTTTAATTT TTGTCAAACACATATATAAAAATGCTTAGCTCTTCGAAATTCTAATAATA AAAACACACGCCTCTGTTCTGTTGTAATTCATCATACAAAGAAAGTATAG TATCATGATGATTCAGTATTTTACCGGTACTTTCCCAATGATGTTCAAAG GGAATTTTCAAAACTACACAACATTCATTTTGCTGACTTCTAGAAACGAC AAAACTTCCCAGAAGAATTACCCACTTTATCTCTCTTCATTGATAATTTA TGCTTACGTAGTGTGTTTTGATTAATCAACAATCTATAATTTATGCAATA TTTGCTGATCCATTATTTATTTGAATAATTCAATATGGCAGCTTTGTAAA CCGCAGGAATCTTTTTATAAGCATTTAAAGTGTAATTTGATTCCAGTTCT TTCTAGAAAGTTTTATTTTTTCATAAGTGTTCCCGTTTCATATCCGGACA GTGGGTGCCTATTGTTATGTTATGCTGATATAAGCAAAAATGTTTTTCTT TTCCTCTTTCTGACCAATCTTGCTCCACATCCGTGTCAATCCAATATGAA AAAGCTTGTAAATTAAATTTGATGAGTAAGCAAACGATGGCACTCATATT TAAAAACAAAACCGTTTAAGTAAAAACTCGGTAAAAACGGTTAATGATCT AACAATTTACGGAAATTTTATTAATTTTTCTAGAACAAACCCAGGCTTCT GTCCCATCGATAAGCAACCAATCAAAGAAGGAGAGTTCTTCGTGGACAAA GCCAAGGAGAAAGAGATTGGTAACACAGAAATACAATGCCCACATCACCA AGAAGGTTGTACTTGGAAAGGATGTATCAGAGATTTCCTGAGGGTAAGCA ATCTGTTCACTACATTACATTTTACTGCGAAAAAAGATTCTTAAGAAGAA AAGTCTACGAGTGGCTAATCGCCCGTGTAGGAAGCACAACTGACGTCATC AAGCTCAATTGAGCTACCCTTGCATGTGTTTTTGTCCGTTTTAACATTTT TAACATCAGACGGATCAACGGATCAACGGATCGATGGATCAACGGATTGG TGGATCGACGAATCAATGGATCCATGGATCAACAGATCGACGGATCAACG GATCGACGGATCGACGGATCGTCGGATCAACAGATCAATGGATCGACGGA TCGATGGATCGACGGATCGACGGATCGATGGATCGACGGAACAATTGATA GACGGAACAATTGATCGACGGATCAATGGATCGATGGATCGACGGATCAA CGGATCAATGGATCGACGGATCGATGGATCGATGGATCAATTGATGGACG GATCAACGGATCAACGGATCAACGGATCAATGGATCGACGGATCAACGGA TCAATGGATCGATGGATTGATGGATCAATGGATCGACGGATCAATGGATC GACAGATCAGAATCAAAGATTGATGGTTCTGGAAGTTCTGCATCAGGAGT TGGTGATTCTAATGAATGTGATGATGGAGTTGATGGTTCTGGGGAATGTG ATCGTGGTATTGATGGTTCTGGTGAATGTAATGGTGGAATTGATGGTTCT GGTGAATGTGATGGTGGAGTTGGTGGTTCTGGGGAAATGTGATCGTGGAA TTGATGGTTATGGTGAATGTGATCGTGGAATTGATGGTTCTGGTGGAGTT GATGGTTCTGGTGAATGTAATGGTGGAATTGATGGTTCTGGTGAATGTGA TGGTGGAGTTGGTGGTTCTGGGGAAATGTGATCGTGGAATTGATGGTTAT GGTCATTTATTCCACCATTGCATTCACCAGAACCATCAATCCCACAATTA CATTCACCAGAACCATCAACTCCACCAGAACCATCAATTCCACGATCACA TTCACCAGAACCATCAATTCCACCATCACATTCACCAGAACCATCAATTT CACCATCACATTCACCAGAACCATCAACTCCACCATCACATTCACCAGAA CCATCAACTCCACTATCACATTAACCAGATACATCAACTGCACACCATCA CATTCACCAGAACCATCAACTCCACTATCACATTAACCAGATACATCAAC TCCACACCATCACATTAACCAGAACCATCAACTTCACCATTGCATTACCC AGAACCATCAATTCCACCATCACATTCACCAGAACCATAAACTCCACCAT CACATTCACCAGGACCATCAATTCCATGATCACATTAACCAGATCCACAA ACTCCACTATCACATTCACCAGGACCGTAAACTCCACCATAAAATTCACC AGGACCATCAATTCCACGATCGCATTCACCAGATCCATCAACACCATTAT CACATTCACCAGGACCATCAGTTCCACGATCATTATTCGATAAGAACCAT CAATTCCACCATCACATTCACCAGGACCGGCAACTCCACCATCACATTCA CCAGGACCATCAACTCTACTATCACATTCACCAGAACCATCAACTCCACC ATCACATTCACCAGAATCACAACTCTTGATGCAGAACCTCCAGAACCATC AATCTTTGATTCTGATCCGTCGATCCATTGATGATCCATCAATCCGTCGA TCCATTGATGATCCATCAATCCGTCGATCCATTGATCCATGATCCGTCGA TCCATTGATCCATCCATCCGTTGAACCACTGATCCGTCGATCTATTGATC CGTCGATCCTTCGATTCATTGATCCGTTTATCCGTCGATCCGTTGATCAA TCGATCCGTTGATCCATTGATCCGTCGATCCATTGATCCATCGATCCGTC GATTCGTTGATCCGCTGATAATCCGTTGATAATCCGTTGATCCATTGATC CGTTGATCCGTCTGATGTTTAAAATGTTAAAACAGACAAAAACACATGCA AGGGTAGCCCAATGGAGCTTGATGACGTCAGTTGTGCTTCTTACACGGGC GATTAGCCCTACGAGGGCTACGAGGCTGCAAATCAAACCAGTCCCAGCTG ACACACAACGTTGTTTCAACGTTTATCTAATAATTTATAACGTTGTCACA TATAATGTTATTTTAACATCATCATTTCTTATTATGTTTTTAGGAACATC AAGATCGATGTGAATATGAACCTACCGAATGCCAATTATGTCATGAAGGT GTTCTTCCATGTCATAAAGACGGTCACATGTCATCGTGCCAAGGAATATT CGCGGCTGGACCGTGTATCTATTGGGATGCTGGGTGCCACTTTACGGTAA GTTACTGAACCCGGTTTATACATGTTAGGAGGTACCCTCTGAGCTCTGAG GAAAAATATTTTTCGTTGCTTTTAAGGTTTTGTTCGAAGGTTTTCCCTGA TGAAAGATTTAACCCTACCAATTTTCCCACTCTAAGGTCACCATAAAATA TATTTTCTTGCAATTCATATACACACAAAATTAATTTAAGACACTATAAT TTAAGAACTTTTTCATTGATAATGGACAGAGCTCAAAAGTGCAAAAGCCG CTGGTGGATTTAAGACAATAGAGCAAGTACGTTGGAAAAATGCGAAGGAG TGCAACACTCGACGTGGTCTAAAACCGCCTATGAAAGCGTTATCTGAATC TAAACTTTCTTTTCCTTAATTCCTAAATTTAGGCTGAGAATAATATGGAA ATGAAGACTCACTTAACCGAATCACTCCTAAGCCACACAACTCTGCATAA ACTTTGGAACAACAAAATCATAGAACAGTTCCCGAATCTAACAAAGAAGT TTGAAGAAGAATCCAACAAGATTGAGGAAATTTCATCCAAAGCTATCAAA CCTATCAAAAAGAGGCAAACAGAATTAGAACAAAAATTCCAAGATTTATC AAATACATTTCAAGATTTTGAGCAACAAAAGATGATTGCTGATTCTCATC GCGATGACTTTTCAGTGGATGCTATTATCCAACCAATCACAATGCGAATG GATGATTTAGATTTGAGATTCCAACTTCATGAGAATACAACATTTGATGG ACATCTTTTATGGAAAATCAATCGAGTCCATGAACGCACATTAGAAGCCA AATCAAAGAAGGTGACAGCATTGCATTCATCACCATGTTTCACCAGTCGC TATGGTTACAAATATTGTTTACGCCTTTATCTCCAAGGAGACGGGATGGG TAAAGATAAATACTTGTCTCTTTTTATCGTTATTATGAAGTCAGAGTATG ATAACGTCTTGAAGTGGCCTTTTCAAAAGAAAATCACTTTCACCTTAATC AACCAAGATCAAAACCGTAAGAATCTGGTTGAAAGCATGTTACCGAGTGC TGATTCATCAAGCTTTCAAAAACCGAAAAAAGACATGAATATTGCTTCGG GGTGTCCGCGATTTGTGGAGATTAACCGATTAGCACCGGACGGATTCTTG AAAGATGATTCTCTATTTATTGATGTTGAAATCAAATGACGTCTGCAGCA TATGAAACNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057255TCONS_00057255Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057255-proteinTCONS_00057255-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:502226..507435 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TRAF5PREDICTED: TNF receptor-associated factor 5 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0.07 0.06 0.03 10.25 6.2 19.49 27.94 10.16 45.78 21.43 8.3 48.4 39.77 40.32 76.03 16.12 17.71 55.97 100.41 14.22 19.27 23.64 27.09 37.31 33.92 297.27 214.82 71.29 38.04