XLOC_036149 (gene) - C. hemisphaerica

Overview


Name	XLOC_036149
Unique Name	XLOC_036149
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_288:490716..503614-

gene from alignment at scaffold_288:490716..503614-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_036149 ID=XLOC_036149|Name=XLOC_036149|organism=Clytia hemisphaerica|type=gene|length=12899bp|location=Sequence derived from alignment at scaffold_288:490716..503614- (Clytia hemisphaerica)
TCTTGACCTCTAATGTTTGATGATATACTGCTTGCTTGACTTTGTGCTCC
TGGACAGGTATAAGTTTTTATATTTTACCCTACAATATTTGTTAGTCAAG
GAAATTATATTTGTGATGGGATGATGGATGGGCGGCGCGGGGGATGATAA
GCAATGCTTTGCTTTGTTTGGGTAGTCCAGGAGCTGGAGCTCGAATACTT
TTTGCTTTTACTAATTCTGATGGGGGAAAAAGTATAGCAGCGCCATCATT
CAAATCAGAAAGCGAAGATAGTATTAGGGAGGGGACTTAAAAAAAGAAAA
TTAGAAAGAATTTAGTGGCATATGTACAAAAGCTGCCAAATTATATAAAA
AGAAGGAAAAAATCAAAAATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNACAAATATTGCAAAGAATTGAATTGGATATCACTGTCAGTCCTAGGAG
AGAATTTGCCCTAGCAATGGACTATTCAATAATCAAAGAGAAATCTTACC
AATGTTAAACAATTATTTAACCTATCTGTATTTCTCAAACTTAGGCCAGT
ACTCTCGGGTACCTAATAGCCGGGGGTTTGGAATAACAGGGGGGGCATAG
TGCGGAAAGGGTCTGATCCCCTTCTTGGCAACCCCCCATTCTTTAAAAAT
ATCTATTCCCCAAGGGTTTTGGGCTAAATATATAGTGTATAGTGTGATCC
GATAATCCCCTCAGACTACTCAAACAGAAAAACTTCCTTTCATGCAGACC
AAATTCATAACAACGCTGAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGTCCCCGGTCAAA
ATTTTTGATTTTTTTCTTCTTTTTATATAATTTGGCAGCTTTTGTACATA
TGCCACTAATTGTTTTTTTCTAAGTCCCCTCCCTAAATTAGTATACGGCA
GATTTTCTGACTATGCTTTGGGCCATTTAAAAACGGGTAGGTAGAAAACC
TGGCCCACCTCTCTGGCCCGGGCCATGCATATGGCCTACCCTTGGCCTCC
TACCCTTTAGCCCACCTTACAACTCTAAAAAAGATTTGATTCTTATCATT
CTGAAAATCTGAAAACCAATTCTGAGGTTGGACTTTGGTTTTTCTGGCAT
TTAGAAAAACTTATAGAAAAACAAAACGAGACTGAAATAAACAAAAAAAA
ATAAAAAGTTTTGAGTCTGCATTTTATACACCTGACATAGATTAAGGGGA
CCCCCGGGAGAGGGTCTGGTTAAGTCCTGTACAGGTGCCAACAACCCCTG
TAGCGCTGTTTCTTCAACTTTTCAGGACTTCGGCGGACGACCCCTTTTTT
CGGAATCTTCACCCAAAAAAAACATAAAGTATCAAAACCTGGCAAAAAAC
TTTGACGTTGACCCGAATCCGACTCGAACTTGGGATCCCTAGTGCAAGAG
CACAATGCGCTATCATTTGCCTGACTTCTGTTGAAATAGAATAAAATTTT
TAAGGCACTTATCCCTTGGTCAGATAGACAAGACCTACATTGTAAAGACT
ATTTCACCCTCAATTTTGGCACTTTCTTAACTCATGGTGCCATAGTATAG
TGGTAGTCGACCTTGGCTTCTGTGCAGGCGGCCAGGGTGCGATTCCCACT
CACGGCAGTTCACTTGGCAAGTGAACGTTCCTTCGCCCGGGTCAACCCAT
GCCATGTGAGGGGAATTGGGTAGTCAGTTCAAGGTGCTGACGGGACGCTC
ATTAGTAAGCGTCTATAGTTGCGAGAATAGGCCTCTAAATAAGCCTCCTG
CAACTCAACCAAATAGAAAAAAAAAATTAAGAATAATTGACCCTCTCATC
CAAAGTACACTATTCTTATAAAAAAAGCGTTTAATTCTTAGAGCATTTAG
AAGATTTGACCAATTGTTTGTCGTAAAACAGCTGATGCAATAACGCCACC
GCGCTTTATGATGAAATCATAATGAAATTATAGCGCATCCTGACGCACAC
ATATCATTATAACCTGGTTGTCCGAGAATAAAATCGGGGAAAAAATGTTT
GAAGGTTGGCCAAAGGGTGGGCCAAGGGTAGGCCATATGGCCCGGGCCAG
AGAGGTTGGCCAGGTTTTCTACCTACCCTTTAAAAACAGCAGAGAGCAGA
AAGCTTGTGTTGTCGTTCGTGGCCCACTTAGCTTTTTTTTTTGGTTGCTG
ACTGGCTGAAGAATGTCTTTGATGTTATGGTAAAGATATATGTGGCATAA
AATCCTACAGTCGCCAAACAAATTCAAAACCTATGCCATTTGAAAGCCCA
TCATACAGTAAGTCATAACAGGAAAAATGTAAAGAGGGGTCATTTACACC
TGGCAAAAAGTTTTAGTTCTTGAGATATATCAATTTGAAGCTCCAATTTT
ACAGCTCCTTTGGTAAAAAGACTCCCCAGCTAAATTCCAAAATTTTTTAG
CACTCATTTTCGATTTCGCTCAACCAAATCTCACCAAGGCAGCACGCATG
CGCGAAAACCAAATAATCCCAGTGAGAGAAGTTTATATCAAAATCTGCAA
CAAAAACAAAAGTGGTCTCTTCTACTGATTGTTTCCTGGCGCTCTTTCAC
AGCTGTTTATCAAATTTCCACCAATGAGATTGCCGCATTTCACACGTCTG
TTGTTCTTTGTAAAATCCCACCATTCATATATTTGTTTCAATCCGTGATC
CTAAGGCTTATGTTTTTTCTCATCCTCAATTTCAGTAAGGGCTTCTTTTC
ACTTTATCGATATTATGCGAACGGCAGTGTGCGCTAAACTATTTTTGTTT
CACTTTTGATTTCAAGCAAATGTCTTAGCAACAGGCAGTTTGTCACACTA
GGAAATCTAGCTTTCAGAAAAAAACAACATCAGTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGAAACAAA
ATAAAACGTGCAGCAGCCAAAATCAACCAACCAAAATTTGTCATTCAATT
CCCGAGACAGCGCTTCGATTTCTAAGGCCTTGTTTATACGCTAAAGTAAA
AATAATTCCGCATATGTAAATATGTGATTGTTTGAGGTCCGGCAAAATTT
CCGGGAAACAGCCTATCCGGTGGTGCACGGATCTAGGTGGGTTCCGCCTC
CCCCGTAGATCTTTTTCTTGGGAAGTTGATCTTCAAATTAGTTTTCAAGG
TTGGCTTGGCTCAAATTTTTTCATCTATGGCTCAAATTTTAGGCAATATC
TCAAAGTTTTTGAAAATGTTAATTTCATTAAAAAGCGCCAGGTTATTTTT
TCATGAATCCCTTTAGAAGTTTTGCAGTGCATTTTTTTGCTTGAGAGTCA
AGTAAACGATATAGCGCTTTCGCTTTGATACGCATTTTGACAGGATGCTA
GTGTGACTAACTGACAGGGCGTGCGTACATAACAACAGGGCTGGGTAGAA
AAATCCAAACATAGAATTCAAAAAAAATACCAATCATCAGAATTTGATGT
GATAGAGTAAGATTGTCAACAAAGTGCCATAAAAAATCATTGAATAAAAA
AAGAACTTTAAATCTTATATATATATATTTTCATTTTGAAGAATGGTGCA
AAAAAGTGAAAAATGGAAAAGTTTCATTTTTTATTGGTTCAATTGATATA
GGGGATTTGGAAAACTTTCTATGTTTGTTTCTTTGCACAAACCCCTGTAA
CTATGGGCGAGCACCACGTTGTTAAGATGTTGGCTTGAAATTGAAAATGA
AACCACTGAAAATGAAAGTAAAATTGGCCCCCACTCCAAATCCTGTAATC
TTGATATATGAGTTTAAGCATAGACTGCCAAACGGTACTAATTGAACGTT
TGATTGTAATAGATAATAATCAAATATTTAATTGAATGTCATTGAATGAT
GACTTATCAATTATGCTGAAATTTTGAAATACACGTTGTTTTCTTTAAGA
AGTGTTTCTTAAAAGAACTTTTAAGAAACATGAGCCTCAGAATGCCTAAA
AACTAAGAAACATCTAAGAAACATGCTGAGGCTGAGAATGAGAAAAAAAA
CATTTTTAAATTGTTTTTTTTAAGAACCTTCCAATCCAGCCTTCCATGAC
AGTTAGGAACATATGTCGAGTTCCTGTACGCGGCCGAAATCAAAAAAATC
ATAACCACACTCATAAAAAATTTATTTTTATGTCTTTTTTTACCGTTTTT
TGCTTAGACAATATAGCAAACATAAAGTACAAGAAGACTACTGTGCCTTT
AATTGGCTGTAAAAAAATTTCGTGTCTGTAGAAATTTCTCCAAATTTCAA
CAATGTATGAACACACCTATTTAAACAAAATTAACCAGCGCATTTTTTAT
CTTTCTACTTCATCTTCAATGAAGCTCTCAAAGTCAAAAAGAATTAAGGA
CATAAGATATTCTTATAATTTATAATTATTAATTAATTATTATTATAATT
GATTTTTCAGGGTTCAAATTATAGCTTCCCACTTTGCAGAATGCGAAGTG
AATCTTAGATTTAGCAACCCAAAAAAATTTCCTAGCTCAAAAATGCGAAG
TTAAAAAAAACGTCTATTTTGCTACTTTCTTCTTTTGTTTATCTATTGCT
TTATCAACTTGCTACTTCGTACTTCGCAACTTTCTTTATTCGTTTATCTC
TCGCTTTATCAACTTGCTCCTTCGCAACTTTCTTTATTCGTTTATCTATT
GCTCTATCAACTTGCTGCTTTGCAAATTTCCTCATTCGTTTTAATATCTA
TCGCTTTATCAACTCGCTACTTCGCAACTTTCTTTATTCTTTTATCTATT
GCTTTATCAACTTGCTGCCTCGCAACTTTCTTAATTCATTTATCTATTTC
TTTATCAACTTGCTACTTCGTACTTCGCAACTTTCTTTATTCGTTTATCT
CTCGCTTTATCAATTTGCTACTTCGCAACTTTCTTTATTCGTTTATCTAT
TGCTCTATCAACTTGCTGCTTTGCAAATTTCCTCATTCGTTTTAATATCT
ATCGCTTTATCAACTCGTTACTTCGCAACTTTCTTTATTCTTTTATCTAT
TGCTTTATCAACTTGCTACTTCACAACTTTCTTGATTCGTTTATCTATTC
TTTATAAACTTGCTACTTCCCAACTTTCTTTATTCGTTTATCTATTCTTT
TCAACTCACTACCTTGCAAATGTCTTGATTCATTTGTCTATTGCTTTTTA
TCAACTCACTAAAGTTTGCTTCGACTACAATCTCTTACTTCACTTTTCTA
GAGAAATACATTGAATATACTTATGCATTTTCTTCCAAACAGCATCGCAA
AAATGCTTCGCAAACAGTAAAACAAATTTTGCCTGCGTTGCTAGCTTTTT
TGCGAAGCTCCTAAAATTTATAATTCGAACCCTGTTTTTGATATTCTTAG
TTTATTTTTTCACCAAGGATAAGTAGAATGACTAACCTTTCTAATTGTTT
TGGAGCGAAATTAAGTGGCTTACTAGGTTACACGGGTTACAAGATATTTC
AAGATAAGCTATGAGTCGTTTATGTGGCTGACAACACTGGTGGCTTTTGG
AAACCAACCAGTTTCAAAATGTTGCTCTTTTATCTGTTTTGAGATAATAT
GATACCTCTAGTTACTGATTCAAGTGTGATTTTCAAACAAACCATTTTCT
CCTTTGAGGTGGCTGACAAAATACATATTTGGACATGGAATCACACATTT
TACTCATTTTACCATTTTTTTCATCATAATATGTTCTTTGTGTAAATACA
TCATCATATACAATTTCAACGTTATATTTGAAATATTTCCCAAGTTATTC
AAGAAATACTTACTATATTTTTGTCAATTTTTGAGTCATTGGCTCTCACA
CTAAATGTCACACTATTTTTTAACATGATCGGTATTACCCCAAATATTTT
CAGGTTACTTGCTGATTTTGAACTTAAAAAGTCCCGAACATGACACAAAA
TTGGCCCGCTCATGGTTTGGGAGGAAAAATCTTAAATTTTGTGGCCTGAC
TTGAATGTTTTCTTACTATTTGGCTCAAGCGTGACCCGAAAATGTTATGA
GTATTTTCAGGCCATATCCTGGGTCATATTAAGTTTATGGTTGGATGTGT
TCTGAAATCTAAGAAAAGCTTGTTGCCAAGATATACTTGTAAGATATTTG
TTTTCCATTAAAGATCTACCATGAAAACGGGTAACTTGCATCAGTAGAGG
CTAACATGCATAAACCTCAATTAATTGATTTTTCTGGTCGTGGTTTTCTC
ACCTTGTATATGAAAATTGAATTTAAAAAAACTTATAATCAATTGAGGAA
AGATCATCATAATAGCAATAAATTGCATCTCCCAATAATGAATATATGCT
TATATATTTGCACCATATCACAGAAAAGCCTTCTGAACTCAAAAGATGGA
AGTTTGAGTCTTTTTAAACGTTCTTCGTAGTGGAGATTACAATATTGAGG
AGTCAGTCTTGTCACCTGTCTTTGAACACGTTAAAATCTAATTTATACTA
CAAGTACAACGTAATTTTGGCTGCCATACTGATTGTGCATATTCCAAGTG
AGGTCTCACAAAGGTGGTGTACAGAGTACAAAATGCCGAAGGACTCAAGT
CGTTTTAAAACAATAAAATAAATACAAAAATAATTGGTATTAAAAAAGTT
TACTATTTTTTAACAAATTTTAACAAATTAAATAGTTTATAAAATGGACT
TTGATGGAAAAAAATGGAATTTCAAAGTTATGTTTAAGAAATAAGGTATT
GTGAAAATAATTCAGCATATTAAGAAGGATCTTTTTTTTTCAACGGTGTA
TAATTTTCTTAGAATTGAAGCCTTTGTGGAAAAATAGCAATTTCTTCAAG
TTGGATAATATCTAGAAAATTGCAATTTTCTAATCAAATCCAACTGTTAA
AATATATTATCTGAAGGGAAAAAGAGAAGGCAAACCTAGGTTGTACAAAG
AAAAAAAAACCTATTTAAAATTTTTTGAAGTGCAGACCTAGGTAAAGCAT
TTTTAGAGCATTTGTAGTAAAGAATGTAAGTATTCTCAACTTCAGTTGAA
CTAGAATCTGACAATGTATGGGGCAGGCTGGAGACTTCAAAAATTGTCAG
AAATTTGGCACACTTGTTCCTTGATTGAATTCCCGGGGGTATTTTTTCAT
TTTTTGAAAATTTCAATTTTCAAGGGGTTGGTCAGGAGTTTTCACCAAAA
CATGGCTAAAACTTTGGGGCAGTCTGATTTTAGGGACCTGGAAACAAGTT
TTTCATCAAAACGAGGCAATTTTTTATTGAACTTAGCCTATCAATTTTAC
AATTGGGTCTACGAATGATAAAAAAATACTTCTTTATCTAAAAGTCTGAT
ATTGGATTTATATTATAGAAAATAAAAATGAGGGTTGGTACTGCATTTGC
AAGTTTAATGCGGCGCAAGAAAAGGGTAGGTCTTGAAAGACGAATTGGAT
ACATTTCTCCAGAAAATAATGCTGGTATATGGCATGGTGCTAGTGTCAAG
TCTGGATTCACTGAAACATTTTCTGGAAAAAAGTAGGTTTATATTTCATC
TGATCTGATTCTTAAATGACGATAAAGCTGTCTAGGTGTCTTCTCAGTTC
TGTAGCTCTTATTTTATTATAGAAGAAAGGTTTGAACGACTTTCATAACA
CTCCTTTCTTAAAGCTTTTTCTCAACAGATTAACTTCGTTTCAGATTCTT
AATCCTTTAAGAGACTTGGTTAAATCTTACAAATTTTGTATTAGCTTATA
CTTTTTCTATGGTTCTTTTCTCCATTGAATTTTTCGATACTTTTCTCTGA
TTAATTTTTAATTTCGTTTTGAATTTTAGGACGAAACGGTTTTGGTACCC
TAATGTGTCAGAGAAGGAGATCTATAGTGATATATTAGATGAAAAAATCA
AAACCACTTTCACAGCAAAAGCTCTGCGTGAAATTGACAATGCTGGTGGC
TTTGACAACTACATTATGCGAACTCCAGATAAAGTACTTTGTTCAAACTT
TGCTATTGAGTTGAAGCGTCAAATGGAGACTGTACAGAGATTTTCCAAAC
ACACAGATATGTCTTTAGAAGAAATCAAAGCCGAAATCACTCCAGTCAAA
CTTTCTAAACATGTCTGGATCCAAAGGGATTACACCAATAGGTTCTATTT
TGATTGGAAGGGTCCTAGAAAGCATATGGTTTTCTGTTAAAGTTTTGATT
CTGGCGTGTCTAGGAATACTTGAATGTAGTGTGATCAAATCATTTGATTA
ATTGATTGGTAGTTATGAGCTTTACTGTCAACCTTGGAAAACAGATCTGT
CTTTGACGAATGGTTGGCCTGATACTATCTATTGATAACAAACCAGATTC
AATTATTATATTCTTGTTTTTCAGTCAAGTATTTCAGGATACCTTCTTCA
AGCTTGTAATGCATTTTTATTCCAGCAAAGTGTAAGAAAGCCATCTAATG
GATACTGAGCATACACGCAGGTTTTATGTTGTATTTTGTAATGTTATTGT
TATGTGTTTAAATTATTCCAGACATAATTAAAAAACCAAAGCAATCAAAT
GAGCTCTCTTCGGCAATCTTAACGAGGGACCTATAATTAGAAGTTATGTG
GTTTAAAACCATTCAGCACAAATTATAGAAAAATTATATTTTCTTTTCTA
ATCGCGATTAAAATAATGAGAAGTCATTTCCACTATCCTGTAATCACGTT
TTTATTTGTCTGTTTCTTTCACCCCAGACACATCTCTAACCTTCTCTACG
TGGTTTTGTTTAACTAGACTGTCAATAAATTTCTATTTTTACCACAAACT
CCAGGTGTCTCTTTGACCAAATTAACTGGAAATAATTAACGTTGAGAATA
TAAATTCGCTATTTTCAGTTCATCATCAGTAAAAAATTTTCAAAGTAGCA
ATTGCTGTTAGTTTCCTGATAAAGGAGATCATTAAAACTTAAAGCTCATC
TCTTAATTGGTTATGTTATAACTTGCAGCTTATTTTCTGCATCTTCTTGT
TTCACCTTTCTAAGCCTTAGAACTTTTGTAAAAGAATATTTTATATTTT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00057378	TCONS_00057378	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00057378-protein	TCONS_00057378-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_288	supercontig	scaffold_288:490716..503614 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.21	30.08	22.04	21.85	16.27	12.03	20.51	21.28	29.58	24.14	18.29	19.29	14.29	12.01	19.61	21.71	29.94	32.73	8.3	9.07	21.72	21.19	27.4	27.95	17.93	23.1	20.69	13.91	20.94	20.52

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XLOC_036149 (gene) - C. hemisphaerica