XLOC_036535 (gene) - C. hemisphaerica

Overview
NameXLOC_036535
Unique NameXLOC_036535
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_302:79109..84196-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036535 ID=XLOC_036535|Name=XLOC_036535|organism=Clytia hemisphaerica|type=gene|length=5088bp|location=Sequence derived from alignment at scaffold_302:79109..84196- (Clytia hemisphaerica)
AGGAAGTTAAGGCAGGAAAACAATTACCTATTTAATGTAGACCTATTCCT CCTTCTTTCTTTTTGGATCATTTACTGCGACGTAATGGTAGAAGACAACC AGTAAGAAGAGGAAAGCCCCCATGACATTTGCGAAAACAGCAACTTGATG GTCGGTAATCATTTTGCAGCAGGACCCTACAAAACAGAAAAAATTAACGT GACTACCTTATAACCTGAGGACTTATATATATATATATACAGATGTATTA AAGGATCAAAAATGTTCACCTGTCTTAGTAGGTTCCAAGGGAGATCAGGA AATCGTACTGATGCTGTATCAACCAAAATTGCTCGATGAATGAAACAGAA TCGGAGAGACGTGGAACATCACTTCGACTCGCCTACCCAGGTAAAAGAGA CAAAAAGAATTTTGCCGCGCAACTAGTGATCGAGACAAGATGATTCTTTT TCTAAAAGCCATCACTGGAAACATCAAAACAAAGATCGCAGAAAGCGAAG GTGGAGGTTCATTTTCAACTTGCTTGTGTGTCAGCTAGACTTCCACCAGA CGACACCATACCCTCTGTTTTGTGACTCTTCCTCGGTGAATTAAGTACCT TGAAAGAACAGAGACATGTAACTTACAGACAGTATAAATTCATAGACCAC TACCAAAGGTAAGAAATGACAATATGCGTAAAACTTAAAACTGCTAAAAA CAGAAAAATATGGTGTCGTCGTGCATGTGAGCGAGAGAAGTATTTACTTT TACTTGTGAACTGAACCCTATACACCCATCAACCTTTAGTTCAATTAGTT GTCTGTACACAGACCCAGTATCTATGGCTGATTTCAAAATCGATTGCTGT GGAGGGTTTGTTGTCATTGTCTTTTCTCATTTGAGATTTTTTAAACCAAT CTCTTGGCTGGCTGGCGGCTGGCTGGCGGCCGGCTGGGATGCTGATGGAG TGTTGGTGGTGAGGAGAAGGGAGGCAATGAAAACTTTCTTTCATTTTTAT TTTGCCAGACAAATAAAGATGAGAATATTCATCAGTTGAAGGCATCAAGT AAAGATGTCAAGAGAAAATTGTAAATAAAGCATCTTTTTTAAAGAAAAGA CAATAATCTAACTGATTAAAAACCATTCATTTTGTTAGCAATGCAACTTT TTTATTCAACAAGTAACTTTTATTATTGCTGTGTTGCAAACGTATCCTGT GGTACCACAGCTACAAAATTCGAAAAAATCAATATTTGCTATGGGGTCAG AGAATTTTTTTCTGAGTTTTCTGTATGGCAGCACCCATTTTTAGAAATCA GTTAAAAAATGACTTTCTAGGGTGCTTACATTCTTTATTGTACAACCTGG TGATCTCGATAGAAAGGAAAGAATTATATTTGGCTGTCTCTCAATTTCTA TAACCTCACTCTGATGATGTGACAGAGAGGGGTAAAATGTTTTTGGATGA TAAAAACTGAAACGGTTATTTCTTCATACTTTTTTTTATTTAAAGGAATG TCAACACTGTCTCATCAGTTAAGAAGAATGTCTTCATCAGGCTCAATAAC AAATCTTGATCTTAACTCCAATACCGAGAATGACACATCACCATTACGTC AAACTCAAACAGTCAAAACCAAATACTATTTCTTTAAAGTTTTACAATTT CTTCATTTTGGCGTTGTCATGTTTTACTTGTGGGCAGGATTGGTTGAGTT CATTAATAATCCACCATTTTTTGATGCATATGGTGATGCTCTCACAAATA TGAATAAACTACCAGAGGGAATATTTGCGGTAAGAAATCATTTTCAAATT ATATATGAAATAAGTTAATTTTTGGATTTTTATTATGAAATCATTTTGAT GTAAATAAATTGGTACTGTATCTTTTTATTTTGCTTTATCTTTAGAATGA CCCAAGGCAAAGACAAGCAGTAAGTAAAATTAAAATTACGATATAGAACT TCTATAAAAATTTGAAAGGTAACTTTATAGTTGTTCCTTCTTTACTTTGA CCTTCTTTTTATTATGTAATTTTTTAAAGAGCATTATGTCTGGTTTTTAG GGAAATTTGAGATTGATGGATCTTCCAATCCTTCTCATGTTGCTTGTAAG TTTCCATCGGATTTTATCAAATTCAATCTATGATATGATTTCGTAATTTA GCGATGACATATGAAAAGTGTTTTAATCATTGTGCTTGAACATTTTTTTC ATGAGCAATTTTTCTAACTCAGCAGCGCTGAAAAATCCATACAATGTATC TCTAGGACTTTTTTATATTTTAATTTATTCGTATAAACTTGCATAGTACC CCAGCTATTTAAATTTGATTATGATTGTACATCCTTGTATATAATGCGCG TTTGCAATAAAAGGAAATGAAAATTAAGTAATTAACCACAAAATGACTGC GCTGTTGTTATTCTTTGTATTTTGTTCATAGGCGTATGCTGGCGTCGCAA CATGGCTCAAATATCAAGGGCTGGCTTGGTTACTAACTTTCTCTATAACC ATTGCTTTTATTTTCTTCTGGGTCGTTAACTTTTGGGCCCAAGGGGCCTT CGATTGGAGGTATCTTTATATATGATTTTTTTTGTTTTTTGGTACATTTT CCGTTCAGCCTTTGGAATATGCATTTTGATTGATGAAATTTATCAGATTA TTGTTGACCTCAAAGTATTGAAATAAAGTCCGGTAGAGTTGGTTATAATT TCACTGAAACCTTGAGAAAAGTCCCAAAAAGCTGAAATTTGGCACAGCTG TCTCTAATAGGATGACTAACTACCAGAAAAAAAGCCCCGTCCATAGGGCA TTAGGAAACCATTTTCCGACCGAAAATTGAAAAGGATGCTTTTTTAGGGT TGTAAAGGCTAGCAAATTTCAGCTTGTTGGGAATTTCCAATGTTAAACGA TAATTATTCTACTGGATTAATGCAGTCTGTTAGAATTAGTTGGAATTCAA CTGAAATAATCAGAAAACTAAGTAAAATGTTTTATTCTTTGCCAAGAAAC GTCTTATTTTATTTATCTAGATATTACTCATCACGGATGTCAGGGTTGGA GCTGCAGGTTTCTGCATTAGCGTTGAGTTGCACTAACATATTAATGGTTA TGTTTTATAAACGAAGACGTCTTCCTTTCAAGTTTAAGGTTAGTTAATAA ATGCTTTGGGACTTACATATGGGAACTTATTTTGATTTATTCACAGTGAA AAAACCCTAAAAGCTTCACAAAAGAAGATGCTTTGTATAGATCTATCCCT GAAATAACTTTCAATTTTGAATTACTTTTCAAATTTAAACATTTTGTTTT AAGCTTTGATGCAAAAATGAACTCTCTGTTATTTCAGTCAAGCCTTCCAA TCGAACGTCTTGGCTTTTTACATCTCTCCTTCAACTTTTGTGCAATCTTC CTTATCATGTTCACGTCCATGTTGATGTGGTTCACTAAAATGTATATTTC ATGGGCGTGTTTCAAAGATCAGAATGAGTTACTTGGACTTTGTCAAGTGA CGAATCAGGTTAGTTAAAGTTGTACAACTTTATATTTGTACAAACCTATT TGTCATGAAATGGTTCCTGCAAACACCTCGCCTTACTGAGTAAGAAATGA TTTAAGTCACTTCTGTAATCTAGATAGGGGCTTAACTTCTGAGTATTTTT CTCACTGGCAACGAATTTAATGTAATTGTTCATTTTTCCTAAGTGTTCCA CAGTAACCGAGACACCTGGTTGATACACCCCTCTCACAGACCTGGTGGGA CCCCTTCCCACTGGGAAAATTGACCTATGACAATAATCAAATAATTAAAT CCTCACTGCAAAATAGTGTGCTATTTTTTCCATCCCAATTTCTGACGCGA AAACAATGGATTTTAAAATCCCCAGCTATAAAAAAGCATGGGAATATCAA TTTATCAGTCATTTTTATTCCGGCTGACTGACAAAATACTACCAAGTTTA TGAGAAAGGGGTGTGTTGATCCATTTTAAGAACTCCTTATACTTGGTCTG CGTCTCTGAAGTTGCACCGATATAGGTTTTTTTCTTTCCAACGTTCAGGT ACAATGCTATCCGTGTCAAACATGCACAGAAGAAGGAATCAATAAATGTT ACAAACGAGAAATTGACGAAACGCTCTTCTCGTGCAATACAAAATATCCA AAAGAAGCTAAAAAGGTAAAAAGAATCAACTATTCTAATATGTCACTGTA TAGGTGAACAACCGCTAAACAATCAATTATACCAAGGATCGACTTACCTC TCGTAAAATGATACCACGGCGTAAAAAACAACCCTAAATTTTCAATTTTG GGATCATTTGCATCATTAAGTCTATGTAAAATCTTTTCAAAATGTTGACT TTGCGTTGCATTTCATTTTGCAGGGAGCATTTTGCATCTTCAATTATAAC ATGAGTACAGTGGAATTCTTAACAAGTAAGTACATTCTTATATTTTTTTT CGCTCGCAATACTTAATTAGTGCACGATTTAACGTCCATTATTCCTAGCA GCTGGAGTTGGAGATAATCCTCAGATGATTGTACGCTAGGCTGTTCTATC ATCAGCCATGTCGAGAGTTGCATTTATCAAGTTGATGTATGGTAACGAAT AAAATAATGGTAACGAATTGACAAACTTGATCTTCAAACTTATTATAAGG CAAAGAGAATGGAAACCGAAATAAAAGAAACATTATATTTAAGATTGATC AAAACTTTGAGGCTTATTTAAGCCTTATTTCTTTGATTAAGGCAAACTAT GTGATGACATTTGTACAATTTTTCGTTTAAGTTTTCGCCTATATTGGAGG ACTGTGTGTTTTCCTGAGTAACTTTATCAAATTGGTTGGACATTACATAT TACGTGTGTTATTCATGTTTTACGAATGGTGTTTAAATCGATGTAATCGA ACCAGTCGGATGATTGATAACCACCGACAACGATTAGTACAACGTAGACA GTTAAGAGAACACAGGATGAATTGCGATCGGCAATTATTAACCGATTCTA TATCGCCCATACAGTCACCTAGAGAACTTCATAATCCAGTCGGTTCGCCA GGTGGCTCCACTAACGCATCAGGTGGATTAAGTCCTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057952TCONS_00057952Clytia hemisphaericatranscript
TCONS_00057951TCONS_00057951Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057951-proteinTCONS_00057951-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:79109..84196 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (22.9 tpm) - - (57 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.83 43.51 44.17 57 30.03 25.94 41.78 47.01 41.16 34.41 33.05 36.85 27.15 28.23 28.32 32.24 35.09 34.5 22.92 23.79 29.52 29.35 43.53 43.42 22.9 23.85 31.58 25.88 42.7 42.23