XLOC_036956 (gene) - C. hemisphaerica

Overview
NameXLOC_036956
Unique NameXLOC_036956
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_312:180205..185230+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036956 ID=XLOC_036956|Name=XLOC_036956|organism=Clytia hemisphaerica|type=gene|length=5026bp|location=Sequence derived from alignment at scaffold_312:180205..185230+ (Clytia hemisphaerica)
CTGGAACTTATAAACAAACTTCGGCGGGAATTTTTCAAATCAGTTTGGTA CTTTTTTGGAGCGAGTAGGGGTCTTTGGGACGAAACGAGCTAGAATTACA CATACAAACACTTAAAAGATTTCAAACAGCACAACACAAAGACAAAACAC ACACGCTCGATCCTGTTTCTCATCCCAACTTcttctgcaaaatttaaaag actGGTGCTGCACTGTCACTGACATACAACAAAGCTGATATACAGATTCA AAACATGAGGAGCTGTAAGTTGTTCACGTTGCCCTATTTGCACAATTTTT ggtctattttgtttttgctttctGCTAGCCAGTTTTGGTAGTCCATGCCT CCAGTATAATTTATGACCGACGGACTTAAAACAAAATTGCTTCGCTTGAT TAAATAAATAAAGTcaaatcagttttttttgtgaaaattgggaaaatctA TATACAGAAGACTTAGCGAAAGCTTTTGGAtttaagtttaaattttctcg cagatttggcaaaaaaaagagGAGTCCTCGTGCCCCACAGACTTTTATTC AAAACCTCAGTGGTGCAGTGGCATAATGATACACAGTTGATACACCCATC CACTCAGTGTGTGTCAGTCGCACACTCCCCGTGCCCGTGGTGCGTCGACT TTCAAGGATAGTACCCCTCCCTGGTGGCTTTTATCTTAAACCGGTGAGCC CCCCCTCGATGGTTTATGATGATGGTATTTTTCCAGTGATTCCATCTTTT TGTACTATAAAGTTTTTAGCAAATTTCGTGAATCTTTACAGTAACTCTCg ctataattcgaactcgaacaaCGGGGAATCTTACAGTTGGCTCCCTCTAA TTTGATCTCTTtgggacaaaatattttcttcgagttatagagaatAAATT CTAATTACAGTGAGTAAATTAGACCACTTTCtggctgaggggaccaatat tttagttcgaattatagaaagattcgaataatcgAATTAGAGTGAGTGTG TCTgtattttgttcgaattactgagatatttgaattatagaaagtattta aaAAGGATTTCTCAGTGATGGGAATTGGAAGCAAGTGAATTAtagaaaaa gattcgaataaacGAGAGTTCACTGTATTTAGAAAATTGTTTCTATTTCA TTTACACAGATacgaagaaaaatttgaaagaggTCGAGGAACAAATGACC GGCGGAGGACAACGTCCAACCATTAATCATTACATGAAATGTCGGAAAAG AAGAGTATCAGCAAGACAATTAGAAAAACGTCAACTGTCCATCGTCAAAA CACCTGTCCACGAAAAAGGAGACTTTGCACCACTACCTATCGAAGTTTGT TTTATATCCGTTTAGAAAATCTAAGATTACTtttcaaatcagaaagtttt ttttttatcaaaatttgataCACTGGTAATTGCAAACTTgcgattttaaa attattttttgctgcGTGTCGCCTTACAAAATTGCCCTCGGGTGTTTAGT CCGTTGAATTTAAATTAGATTTAGGAAGCGTAGTTTGAATGAAATATAAA ACAcaacttctttttatttcaccttttttttcattagtttttttgatttt ttttcggtaatCGCATCATCttcattttgaccattttcttgaattttcag GTCATGTTTCGGATTATCAAGTTTATCCCGTTGGTTTCATTGGGATCGCT GACGTTAACGTCAAAACAAATGCGAGACATCATCATTATGTACGTTCACA GTCAAGAAGGAGCACGACGTGTCATTCCAGTCGTTCAAAATATTCCTGAA CATTCGGACCTAGACTCTGACGAATACAAATCAGAATCTAAGAGGTGTCA CACTCACTACAAACAGCTAGGTATATGTCCCTTGTGGTACTTTCGTAAAA GTGATCTCTTAAAATCAATGCGCGTTTCGTGATAGAATTCATTCACTACT ACTACTTTGATATGAAGCTTTCTTGGTGCCGTTAAGTTTATAGGACTACA CGGACAGAGCAGAAAGTTATCTACTGTATACTCCATTTATTCTTCAAAAA AGAGAGGACAAAGATACACCGCTGGGAATAGTTGCTATAAACTGATTTTC AAACTTCAGGTGTCATGCTGAAACGGACAACGTGTCTTTTTTCAACAAGA GATCGATTGGCTGAAGTTGGAAAGATTCTTGATCAGGTTAGAAGTTTGAA TCTTGGTATTTTCTACGTTCAGTGTAGTTTAGCTTTAAAATTTAAGAACT TAACCTGTTATGTTATATGAAGAAATGCCACAAAGGCTCAAAACTCCTAC CGAAGGTCGAAATACCCAACGGGCGCTAGTCATTATATCATCATATTTTT TTCCAGCTACGAGATTCGCACGTTAGAATATGCACCAAACTTGGAAGCGA CCTTGCATACAGTTGCTATGGCATCTTTTTACATGCTTTCATAGCTGGAT GGGAGGAtgatgaaaaatctaaatcctTTCAAGCAATCAAAGGTATATAT AATCTTAAATAATGTTAGTATTGGATTATTTTTATTGGGCAATACAcgaa tttcctattagcagactCATGTAGAAAATTCACGAAAAAACGCACAAATT GCACACATAAATATatataaacatatttttttcaaatatccaACGTATGA GGTGATCTTTGCATTCTCAACCAATCAagagctttactcgacgtttttcc gacttttttacatgaatctgtTAATAGGAAATTTGTGTATTTTGACAAAC TTCAACTCGAGTCGAAAAATAACACTCCTGTCTCATCCTCTCTAGTCACC TAGTGATTATCTTTTAACTAGTGGGTTTAAAATTGATGAGCTAAATATCA TGAGAAAAGGAAAATGTAATAGGTCGACCTTGCAACTTCTATTGCTTgtg ggggggggcgtacggtatttcggtattgcggaaatcgacccttttttctt cggaatttcggaaatcggacAAAactccttcggtatttcggaattctgaa attgtttcggtatcggaaatccatgaatttttgcttcgaaatttcggtat tataaagtttttatccccctttttcggaattcatacatgtgatgaaaaat tagttaaaacgagggaaaataccccaaaaaatcggtatcagaattgcaag tattttttcacggaatttcgtaaattttggcaaaattattcggtatttcg gaaatcgcaaaccccgtacacCCCCCTTGCTTCGCTATTGCTTACGGTTT TAAAACGTGGGAAATACGATTCAACCCGAAGTGCTTTTACCACCAGAGTC CCCACCAATTATGTGACACGGGATGCTGTAACGTCTGTCACAAACAAGTA ATGACAAACGTATTACTATTACCAGTTTCTGGTAACCGTGTTCTTGAAAC CAGAGTTTGTTATTTTGTTTGCCCTCTACTTAAATCTTTCGTGATTTAGG TGCATCTTTATTAGAAGAAAGAATTGGATACTTAATGAAGTCAAAGCCTG GGACCATGCCAGGTTATGAAAGGTGAGAGCTAatttaaattgatttaaaa GGCTCTGTCAGAAGTTAAAAGAACATCTTTAGCACACACTTGCTCAAAGA AAAAGCttgtatattttttgatttttctcaaagaaaaaagcttgtatctt tttgattttcttactTTAGATACATCCGAGTTTTCTGCCGAGAAATCTTC CTCAACAAAGCAAGCAAAACTGAAAAAGGATTTTGGATGGCACAGATTTT GAAACCATATCCCATTTTCTTTCAAGCAAGACTTCTCTTCATTCTGTATG GTCCAACTGATCTTGAAAATGGTAAGGGCACATCATGTTGTTATGGCATA TACCAATTACTAGTTCCAAGCTATCCGATGGCCATTTGTCTAGTAATTAC GTAATGTTCAAAAGGATAACCATAANTCAAGATATCCGATGGACATTTGT CTAGTGATTACGTAATGATAAAAAGGATAATCATAAATATCGTTATTTTA TATTTGATCTGATTTGATAATTCATAATATGAATCTCATTTGCAGAATCG CTCGAGGAATACCGGTATTCGTGGTATTCTTGACAATAAAACTGGTAATT TATAGCCGTGTACTGACTGCTGTGTATTTAAAGGTAAAAATAGAGTAata tttcgaaactttttgTTTCAGATGACTTAATTTGGGATGAAATGGCTGTT TCATCAGACATTGCAACTGAAGATTTAAAAGAACTTGCAGAAGGGATGGT GGCTTTACAAGATGACCAAAGAGGTTTGTGGAGCGCAGATGATATCATAA GCATCTTTGATGAAATCACTAGTAAGTTATATAATCAAAAAGCTAGGCTA ACCTTTATACTTGTTTTCCAGTTCAGAGCTTTTTCAACTAATTTCAAGGA ATTCGAATAACAGTCTCGTAACCACGACGGGGGGTTACTTGGGCAAAAAG GGTTACGGGGTACCGCTGGTCAGCCAAATACCTTTTTTCACcgaggtagg gtcgcaaaacgCAAAAAAAGGGTAACTTTTTAAGGAAATTTGGgggaaaa aaggaaatttttggaaacTCAGTCCCGtttagggtcacttttttcgcaaa ttttgcccaaattttcagaaaaacgagtcccatttttcgaacctcggcGG TCCACGCCCTGGAACCCTGATCATCATTATTCTCCTCAAGCAAATTAGAT CAAGTTatacaaaaacatttaaatcTAGTACGGAAGAGAACAACTCTTGG CACTTATCATATTTTAAATTAGTCATTATGAATTTAAATGCATATAATAT GTTCATTTTAGCAATTTCAATGGATTGGGATATCGAGAACATTGCTGTCT TTATGAAAGAATGTGGAGACACAATGTGTTGTGAAGTGTTGGGAAATAAA GCTATCAATGGANGTTAGGTAAAAATCAAATTGTCCTTAATCACAAGAAA CGCATCGTGGCGAGATTAAGGTCATTGCGCTACTCATATGTCGATACTAT ATTCCATAAAAGACTATAAATGCCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058665TCONS_00058665Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058665-proteinTCONS_00058665-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_312supercontigscaffold_312:180205..185230 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FBXO47PREDICTED: F-box only protein 47 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.11 0.13 0.09 0.08 0.03 0.04 0 0.02 0.03 0 0.04 0 0 0.02 0.03 0.06 0.19 0 0.03 0.3 0.08 0.03 0.06 22.92 27.75 0.04 0 0.19 0.13