XLOC_037448 (gene) - C. hemisphaerica

Overview
NameXLOC_037448
Unique NameXLOC_037448
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_328:33821..37757-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037448 ID=XLOC_037448|Name=XLOC_037448|organism=Clytia hemisphaerica|type=gene|length=3937bp|location=Sequence derived from alignment at scaffold_328:33821..37757- (Clytia hemisphaerica)
GCTTGAATGAATGGGTTCACGAAAGATGCCCTGTTACTTGTGGAAAATGC
AAAGGAGGTATACCCGCTTTTTATAAGAGTTATTACTCTCTGATGAAGCT
GGCCAAAAGTTAAGAACTAGCTCTGGTGGACGCAATTAAGCAATAATCTT
TACGAAGTAGGAAAGGAATCGCATGAAAAAATCAAATTTTCGAATTTTTT
AACATAACTCAATACTTTAAAAAATTCCTTATTTTTAGTAGGGGGAAACC
CTTATGATCCGCACCATCTTTCGTGGGACGCAACTACGTTTAATTGGTTT
GCAAATAGATGATAGTCTGTTCCAAACTCTTCTTCGCTGACTAAAAAGAT
GAAAAAAATAACGCGAAGTTCGATTTGTTACTGATAGGAAACATTCCGTG
TTCCAGACATTTTTACGCAAATCTCTGAATGTCTCTGTGGTGGAGCGTAG
CTATTTTAAGCAATCTAATTCGACTAAAGTGACTTTACATTTAACGCATC
AATGCAATGGTATCTGTCACTTATAAAAAGGGCACTCCTACGGTTTTGTT
TTCTTGGATTTTGTATCAGAAAACTGGGACAAACTAAGGCAGCCACATAA
TCTGCTCATTAAAAAAGGCACTCCTACAGAAAACTCCCAGAAAAGTGGGA
CAAACTGAGGCACAGAATCTGCTCGCTAACCAAAACAGACCGACATACGG
TAAGTTTTTTCAAAATACAAAAAAAACGCCCGTGAGTGGGTACAGCTAGA
GGCTAAAAATGATAGGATTTTGAAACTTTTTTGAGTGACCAAGCAAAAGT
TTTTTATGACCAAAAAACTCTCAACCCCCAAAAGGAGTAAACAATTTGAC
GGTCTTCAAGGTCAAATTAAACTACCAGTAGCTTGCGCTATGAAAATTAA
GTAAAAATGATTGTTCTTATTGTATAGTACCCTGGGTATCAGAGGTTCAG
TTTTCAAAGAATATATTAACCTCTGGAGACCAATAATATATATTTTATCG
CGCATGTGCCAATCTAATCACTGTAGAAAAAATCAAAAATGAAGAGCAAA
TATTCATATTAATGTCTACAGACTGTATCAGTATACAGTTTACTATTTAC
GAATTCCCCAGAAACCTCTAAGTGTAATTGAAATCTTTTACACCATCCCC
AAATGTATAACAGTAATTACTAATTTTTTGATTAAAGAAATCTCACTTTA
ATTGAATCAAAATAATAGACAGACTTTATGTTATGATTCTCTATCACTGG
GCGCGTTCACACTGGAAAGTTTACTTAATTAAATCTATCAAAGTTAAACA
AAGAGATTTATGATGGATGAATACACTGGTTTATTACAGTTCTTTGTAGG
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAGCTTACGACTCTTAATTAAGGAAGATCGATTAAA
AATTACAATACTACGCGTTCGACTCTTTGTTAAATGCACGTTCTGTATTG
TAGTCAACAAAAGATTCTCCGAACTACATTTTTATTAAGGAAGGTCTGTA
GTGTGAACACGACCACTGACTCCTTTTACAAAGCATTGATGACTTTTTTT
AAGTTGTGTTTTCAAAGACGGGAATAAAAGTACCAACTTTGAATTTCATC
CAAGATCTTGGATGGTCGTCATTGTTACTTTTGTCTTCGTTGATTGCGCG
CTGAATAGAATCTCGATTCGTCGGCACAGCGTTAATATATGATTTTGACC
TGTGCTATTCATGGTACGTATATAGAGCATAAGATTCTAAGCAAATAAGT
ATATACAAAACTTATACTCAAACACACAAAAAAATAATTTCTGCGCAGTT
TTGTAATTGCACCCTTGCGCACTTTTGCAATTTTAGAAAAAAATCGTACA
TTTTTATCCAATACTTTTCTTTTCAGATTCGTCTTCTTTGTGATTGACCT
TATTCGAGGATACTTAAAAAGCTTTTTAAAAAGCACTTTACTTTATTCTT
AGATGATTCATTGATCAAAGAACTATTATGCTGAAAAAGTCACAAAAAGC
CGAATTTACAATGAAGAGTTATTCCGAGTTGTTCCCATTTGTACCTAAAC
AGATACGTTTTTGATATTTTTTGATTGGCTGTGCGCTTTTCATTAACTAA
AATCAGCTCTATCATGAACCTTTGTTGCTTCATTAAAGAGTTATGCCGAA
ATATGTAATGCCTAGTTATAACTCTTTCAACTTTTAAATTCGAAATAACT
TAAGTGGTTACATAGTATGAATGTATTGTAAAATACATTCATTCATTCTC
TTGAAAAGAGTAGTGATACTGATTATGACGCAAAATGATTGAAATTAAGA
GTTGGATTTTTTATCTAATATCTCAAAGGAAAATTTGGACGATTTTTTGT
CAAAATTACAAAAGTGGGCAGAAAAATTACAAATCTGCGCAGAAATTATA
AAACTGCGCATAACACCATTCAAAGTTCAAAATCATGTGAAGTCTTTTCC
AGTTTAAGCTAAATTTAACGTCAATTATACTCTAACATAATTTTGAACTT
TGAAAGCCTATACTTTTTCTATATGTTTGAGTACAAGATTTGTTGTAAAG
TATTTTTTTCTATATGTTCTATCCGATGGTACCAATCATTTGCGCTAAAT
CAAATTTTAAAAAATCCTCATTTTTTTACGTATAATTTTAGGGGTTAGGA
GTTATGTCTAAAGAATCTGTTCTCAAAAAAGTTTCAAAATCCTATCTATT
TTCGAAACAATCACATGCGGTTACGTCCTACGAAAGAAGTTCATAAGGGT
TGGTTGAACCCCCTACTAACTTGGACGATATAAATTACGAGTAGAGTGAC
TCTCTTATTGATCTCTTTGAAGTTGGTTAGTTGTTAAAAGTGAAAATCCA
TTATTTTCTTTAGAATTCTCATTGGAAACTATGGCACAAATAACAAAAAT
TTACTTTCATGAAAAGGCTTCATCTTTATGTGGCGGCTCAAAATCACGGG
AATATTTTTGCATACATACAGAGTACAATAGGACATCAAGCAAGGCACCT
AGACCAACTATTCTTGGAAGCGTAGACACTAAACTTTCGGGCAAATTTAA
AAAAAGTGCTGCTATTAATTGTGGTAATGGGAATCCCCAACGCGTACTTG
NGAAAGAAGTGTTTATCTTAATTGTGGTAATGTGAATCCCCAACGCGTAC
TTGATGTAAGTGCTTCTTTCTTTGTACCAGATTGTTTTATAAAAGATAAT
ATGATAATAACCTAAAAATAAATTCAAGAACAGCCCATTTTCCAGATTTT
ACAATCAGTAATAACTTATAGATTATAGTCCATTTTTAAGTCACAAATGA
AGAAAAACCCTCCAATGTCTTATCTTTATTTTCAGGTCTGGATGTCTACT
GAAAGAATATCATCGTCCGCGGGTGTTAACGATAAGTTAACTTTCAAAAA
ACTCCAGATGACACGTGGCAAATGTGGAGAACAGCAAGGACGTAAACGTT
GAGAAAATCCTAACGAGAATGGACCGACCATTTAGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059486TCONS_00059486Clytia hemisphaericatranscript
TCONS_00059485TCONS_00059485Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059486-proteinTCONS_00059486-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_328supercontigscaffold_328:33821..37757 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.12	0.14	0	3.14	2.37	1.99	2.1	0.18	0.44	0.25	0.82	32.51	14.85	0	0	0	0.41	50.84	90.29	0	0.27	0	0	0.18	0.23	0	0	0	0