XLOC_038865 (gene) - C. hemisphaerica

Overview
NameXLOC_038865
Unique NameXLOC_038865
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:613700..617508-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038865 ID=XLOC_038865|Name=XLOC_038865|organism=Clytia hemisphaerica|type=gene|length=3809bp|location=Sequence derived from alignment at scaffold_361:613700..617508- (Clytia hemisphaerica)
ATTCTCCCTTATAGACTACACGAGGAGGGCTTTTAATCCTTTTGGAAAGT
TAGATCTTCAGGATTGATTTCATTGATGAGTTTCAAAGTAAAAAAACTGT
CAGTACTTAATGTTCAGATAGAATTTCTTTACTAGATTTATCTGGACTGA
TTGTAATTATCTTCCTTTCTCGTTCAGTAATCAAAGGTACATCGCATGCA
AATATTGGGACAACGACATGCGGAAAGTTTTCCACAAAGGAAGAAAATAA
TTTGGTTTCGAAAGTATATTACTTTATATTTTGCATTACTAATTCCTCGA
GTCAAAGCGTACTAGCGAGATTCTTGAACAAACTGAAGACCATTTTCCCT
GACGATTTTTTTAGATTTTCAACTTTAAGACGAGTCTTAGAAGGAACCAC
CCCTTAGAATTCCCTAGAGAGGGAGCTTGGATATTAGTCCTGGCGAGACC
TACGACCAAGTCACCTTTCAAGTAAAGCCTATATATGCATATTAGGAGGC
TAACTCCCCGTACTCGTGATGTTATGGAGGGGAATTACTCCTAGAAAATT
ATTTCAGTCAATCCCTCGAAGATCTCTGGATTTCTGTCGAAAAGGTGAGC
CGAGAAAAAGAGAGTGAAACAGAGGAAGTAAAATCCAAACCGGAAAAATT
GTGAGGTTTCGAAAGAGCTTGAATCTAAGAAAACATTTGCACATGTACCT
GCACAGCTAGTACCAGGCCTTTTGCATATATAGATATTGTGTTGCTTGGG
ACTGGTAAAGAAGTTGTAAGCATCCTATATATCGTGGAGAAACATCATGA
GGACTTCACAATTCATCAGAAGAAAATAAGTTGATAGAAAAACAAAGATT
GGGGACGGAAAAACAAGAGGTAAGGTAATTCCTTTGGAATTTTGTTTGTC
CTGAGAAACAGTAATACTAACAATGAATTAACTTCAGGTTGAGCATGTTG
CGATAGACCACGAGAAATGTGTTCAAACAATATTTCCTCAAATAATTATG
GCACTTATTTTTGGTAACACCACGCTCTTTCACTGTGGCGCTTATAAAAG
GGAAGCGCTTGACAACAAAGAATGAGATCATCAGAGAATGAAAACAGTCG
TGACACTATTCATGGGAGCCATCCTGGCTGAACAAAGATAGCTTAATCCT
TCGTATAAACACTGCATAAATTATCTATTCCAGGAATGATGAACGCCGTC
ACGTTATGTTTGATGCTTTTCATTGCATCAGGCGCAGGCGTAGACATTGC
ATATCGACAAACAGACGATTACCAGTTAATATGGTCTGACAAAGAATCAA
AAGGCGACAAAGATGGTTCAATATGGAGAGTGAAAAATTTCCAGACTGGC
TTTTGCTCTTTGGGGGATGTTGCGAAAGGAAGTCATAGTCGTCCCAACGT
CAAAGCTTTACTCGTCACTGCTAAGAAAGCTGGAGCATTAGCACACCCCG
CCAGTTTTACGAAGATCTGGACAGATAAAGGATCAGGTGCTGACATGAGT
GTCAGTGTATGGAGAATGAACCCTCCTAGAGGATACAGGTGTCTTGGGGC
TGCAGCCATGCCAAACCACCATCACCATCCCGATGCATCCAAGTATTGCT
GTGTTGGACACCAATACGTCACTTCAGCTGGTGTCATCGACGAGTATAAT
GACAAAGGGTCTGACTCAGATTTGGACGGTGCATTTTGGAGGGTTGTCCG
TAAAGGTGGAGACTCTTCCGGGATCTACGGTGGAAACTTCTTGGTCACAA
CCAACTACCACTCAAGACCGACCGCAGCTGCTTACCTCTTAAAAGCCAGC
GACCTAGTGAAAGATGTATGGAGCCTACCCGCTGTCGCCGTAACACCACT
GAACATTTATGAGCAAAACAAATTGGATTTGATTTGGAGTGACCGTGGCT
CAGATGCAGACCACGACTGTACCATATGGAGGGCAAATAAGCGTAATGGA
TATTATCCAGTTGGTGATATGGTAGTCCGTACACATGGCAGACCCAGAGT
GGGCTACCTGGTACAAATGAGTGATCCCGACAGCGGTGATCTTAAACAAC
CAATCAGCTATCGTCAGATTTGGAGCGATAAAGGATCAGGGGCTGACATG
AGTGTGAAAGTATGGCGTGCTAACTGCCCCAGTGGTTACGTTGCCCTTGG
TGATATAGCAACTGGAGGCCATTATCCTAAGGGAGGTGAAATGTACTGTG
TTCGTTCAAAATATGCAGCATACACAGCAGCTTCAAATTGGCAATGGGTT
TGGAATGATAAAGGAAGTGGATCCGATACAGATGTAACTTTCTTCGAAGC
AATAACCCGTGGCAACAGATTATTACAAAGCACGAGAGGCATGGGTTCTA
AAGTGGGTCACCATGGCACGCCACATTATGCACCTTTCATACTGAAGAAG
TCAGACACAACTTATTATGCCGAAAAACCAATTCGCGAAATCAAGTTGAG
GAATATGAGGTAACGTTTATATGAATTTTTTTTTTTTCAAAAACTTTGAG
ACAAAGTGTATTGTAACTTTGTGTGTTTCATTTAAAAAAAAATATTTCAT
TGGTCTACTTTTCCTTTAGATACGACTTGTCGAAGAAGAAGATCTCAGGG
AAGGCACCACAAGAAATTATCCCGACCGTAGTCAACAACATGAGTTCAAA
GGAGCAAAAAGGTGGCCGAACAATCGAAGTACAAACTTCGAAAACATCAT
CTTTCGAGATGAGTAGATCAATTTCTTTTGGGCTTAGTATGGAAGTATCT
GGTGATGTCCCAATCATCGGAGGTGGTGGTTTCTCAGTCACCACGAATTT
TGAAACAAGCAAGAGTTATACAACAGGTTAGTTTTCCATTTTTTCCAAGA
TTTATATAATGTTCTGAAGAAAGAAAAGGACGCGACACATTTTTCTCAAA
TTATCATCTTGCTCTTTCCCTATCCATTCTCCTGTGTTCTTTGAAGCTAC
ACAGTCAGTGTTTTTCTCTAGCAAGGTCTCTTAACAAAAGATTTTTAATC
TAAAAAAAGACTCCCTAGTTACTTTGTCTGTTTCAATCAAATAGGAAAGT
CGAAGACAGTGACCAAGACAGATTCGGTAACTGCCGAGATTGTTCTTCCA
CCATATTCAAGGAGCACTGCTTACATCGTTGGCAACCAATACAAAGCGGA
TATCCCGTACATTGCCACGGTAACCAAGGTCTATTTTGACGGTACCGAGT
CTACTCAAGAAATGAGTGGAGTTTTCAAGGGCGTTCAAATCGCAGAGTAC
GAAATTACTTATGGTGAGATTACAAAAATCCCTGAGAACGAAAGAAAACC
NTCGCAGAGTACGAAATTACTTTTGGTGAGATTACAAAAATCCCTGAGAA
CGAAAGAAAACCAGTTTTTGGCTAACGGAAGATCTTCAATTTTAATTTAA
CAAATTAGATTTAGTATTTTAATTAGAGTGGACCGATTTGTATCTATTTT
ACAATTATTTAGTAGTAATTTGCGAAGACCAATTCCAAAGTAGATAGTGA
ATAATTTCAGAAGGGAGAAAAGAACATTATCAATAAATACCATCCTAAGA
CTACAGTTACACTTGCTCCCCTCCCCTTCTAAAAGAAACTTGCATCCTTC
AATCTCCATAAAGACTTACCAATATCTTGCCTTCATTGTTAAACGAATCT
ATCTCTGGTTTTAGATCTAAAATCTGAAAGCATCTAGCCGCTGACACTTT
AGCTGCAACATAATCTGGTGCCATTGATCCAATCTCTCCTGCAATCATAG
CTCCAAAAACTGTCGATAAAACTACCCTGCGAAAAAGCAAGAAAATAACT
TACCTAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062002TCONS_00062002Clytia hemisphaericatranscript
TCONS_00062001TCONS_00062001Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062002-proteinTCONS_00062002-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:613700..617508 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.59	0.75	1.1	0.66	1.18	1	1.16	1.58	44.53	11.2	64.58	81.32	11.3	9.59	60.82	44.94	22.22	9.29	5.51	6.64	1.51	1.66	0.94	1.51	0.98	1.92	1.89	2.78	1.9	1.54