XLOC_040460 (gene) - C. hemisphaerica

Overview
NameXLOC_040460
Unique NameXLOC_040460
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_418:208739..213837-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040460 ID=XLOC_040460|Name=XLOC_040460|organism=Clytia hemisphaerica|type=gene|length=5099bp|location=Sequence derived from alignment at scaffold_418:208739..213837- (Clytia hemisphaerica)
TTTCAACAGTTACCAGACAAGAGTATTGGCACCCTGGTCAAATATTACTA CACGTGGAAAAAGAGTAGGAATAAAAAAAGTTTGATGGATAAGAGCGAAG CAAGAGAGTTGGCCATCATTAATGGTATATTTGCTGATGACAGTCCCAAT GATGATTCCAGTGACAGCGATTATGAGCCGGTTGAGAAGGTAATATTGTT TTTGAACCTCCAGAAAAATAGCATTTTCTGAATCCTCGTCATTAGGTCAA ATTAGAATTTGGGCAAATTTATAATTTGTGACCCAATTTCTGTGTGTGGT AAATAGCCAAAGAACTCTTTTTTTTCAATCTTTGAAAAAAGGGGGGGGGG TTCAGACCCCTTTCCTCACAATGGTGATATTATAAGGACCGTTTCGAAAT GAATATTATTATCTTTTAATTATGTCACCTCCTATTAAATTTTATGGTTG GTAAAATAGTTATTCAATTTGATTCTGCTACCGAGAAATATAATGTACTG GTATAATTATAATGTTTGAAAGGTATACTGCATTTTTCGAACGAATTTAG TAAAATTTGTTTTATTAAAAACTGGCTCTTTTTTTCCTGTTTTAGAAATC GCGCTCCAATAAAAGTACAGATAAGGTAATGGAATTTTAAAGAATATCAT CATGGGGTGACACATGTTGCTTTACTTGATAAGTCTGTCTTAATGCTAGG TTCTATGTTGGCTCGTATTAAATATTCACCCGATAGTAATTTATTTAATT ACAAAAAAACACAATTTCATAGAAATGTTATAATTGGAGAATTCAATTTT CAAATCTAAGCTAGGCTACGTCATATCTTCCTTCGTTTCAAGCGTAAAAC TCCTACTCTTCGAGTAAGACCTAAAAGACTGGAGCTATCTATTGTGTTGA CTAATCTAAGCTGGCAATGATAATTAAAAACTAGTAAACAAATAAAACAT CAAAATAGAAGAAACAAATAAAATGTCTTTTTAATTTCTAGAACACGCTC AACAATCATACAATGAATCATCCAATCTTCCAACAACAACAACAACAACA CCAACAACAGTCTTCACACAACAACCTGAACAACAAACCAAGTCCAATGC TGTCCACTAATTGCGTCAATTGTGCTGGTGTAACACCTCAAATGCATTCC ACGCCTAGAGGGAAAATGTGTGTGCCCTGCTACGAGTACTGGAGGTAGAG ATGAGTTTTGAATTTTGTCACACGCGGAGTTAAGATTCCATTTGGGTAAT TTCAAGATTGTCAACCATGATTTGAGTCTATATCCAATTGAACCCCTTCT ACGGATGCTTTCAAATGCTGGATAGGTGGCGGCGCTTCTAGGTCTCTACT GACGGTATCCAGTCAAAAAGGAGCGTGACGTAACCACGTACCCTTCCTCT GGAACGGCCGTACATCTCTCTACATCTTGTGAAATCCGAGTGAAATCAAC GGAGCAAGTTTAAATCATTTATCGGAATTGAGTGTCTTGACAAAATTCTC GTGATAAAATTAGATCAACAAGCCATTTTCCACGCCCTTTTAGCCGCCGC CCCTTCTTAAAATCACCAAAATATTTAGAAAAGCACCCTTGATAGTTGAA AGGCACTGGAAAAAGTGCAGATTCTGTTTATATACAGTTGTGGCTTGGAT AAGACGAAAGAAAGGCTATTTCTATAAGTTATCCTATGAGCTATTCCTAT GAAAAAATTCACAATACTCCATCATTAGATTGGATCGTTCGTTTTTTTTA AATCTAGCTTTAATGTTTGTTGTTTCTCTTTTAGACGAACAGGTATTATT CGGCCGCACGACAAAGACAATCCTATCTCGTTGTACTCCGCTCCTCAGTA TAAATCCAAGAAAAAACCACCCAAGGTATATGATTTAATGATGATTAAAC CAGACGTCATAACTTTTACGCAGTAACGTTTATTTCATTCCACTCCAAAC ATTGGATTTTGTGGCGTCACTTTAAACCTTCCAAGCTCTTGCAGTATAGT GAAAAAAATCGAATTTGCGTCAGAACACTTTTTTTCAAGAATTTACACTC TTCAATGAAAGTGTAACAAAGTGTAACTCGTCAAGAAAGGGAATGAAAAA TCCTGATTTTTGATGAGGTGCCTTTTCAGAAATTTTGAGCGAAGGAAGTT ATTATTAAAAGTAGATAAAACTTATTATTGCTGATTGCTGGTTTTTCAAT ACTATACATTCTAAAGAAACACTCAAGTCTTTGGTTGTTCTCCTGAATTT CATCCAGAAAAATTATTGCATCCCCAAATCAAATCAAATTCAATCAAACT GTTCAAATTTATATTCAATTTCCCATAAATTATATAAAACTTCAGTTTTG ATTTAAACTCGAATTTTCAGGGAATGTCATTAGGTACGGAGATGTTGATT GACATTGCACAAAGTCATGGTGATTCACATGTCAGACCTCTAGAGGTGGA ACTTATTAGCTTGAAGCGTCAAATTATGACCGATAAGCAGATCTTACAAG AACAAACACTGGCTCTGTCTGGTAAAGTGGAACAGTTACGACCCCTCTCT GTAAGTATCTGATGATTCAAATTTTTAAGGCTTTTCCTACACGGTTTTTT ATGTTCACACCCATTCATAAAGTTATCATGAAAGTTATATTACAGGAATT GTGCTGACAAAGAACTTATTAATTTATTAACTTATTAAGTCTCAGAGTTT GTGGTTTTTGATTCGTTGCGGCTACACCCAGATAAGATGGAGTTTCCATA AGATACTTTAGTAATTGGTCATTTTCAGTAATAAGAATGACGTGTTCTTT ACAAAAAGTAACAAAATTGTTTTATTACTAGTTAACGACCAACCAAATCA AATGAGAGCTTGTAAAAACTCTATCTCGTCCCGCTACACCTAGCTATTTG TTGGATGTGCCTCATTGATTAAAGAATCTAAAATACTGTTTGAAATCACT TTTTAGCTCGCTCAAAAGTTGAATTCACGCTGGACAAACGAAGAATTATT AATTGCCGTTCAATGTAAGATAAGATCCCTAAATAATGGAATTATTGTGA TGCACTCCAAGCAGAATGCTTATTAATAAGATTTATTGAAAATTTTATCA CAATGAGAGGCTCATATTAGCATTCCTTTTATGCAGATGTTTACTAGATG TCGTAATCTCATAACAGATCCATTCTGAGCATATCACACTCTGCTCTAAA GGGATATGGGACATATGGCGATCTGACCTGGTTGTTCAGCCAAAGCAATC AAAACGCGTTGCTTTTTGCTTTAAAACGAAAGCGAAAGCGACTTGGTCTA ATGTTTATGTATTGTTTATCGTCCCTCACATGACTAAAGGTTCAATCTCA AAAAAGGCAATCTCAATCTCAAAGATGACCACCACAGTAAAACTCTAAAT TTCATAAGGTATTAATTTTGAGATTAAACCTTAAGTCATGTGAGGGACGT TATGTAAATGATTGACCTCTGATTTTGATGCGATTGTTTTCCTTTAGCCA ATCACCGCGCTCATTTTAAATATTCATCCCAAATCTGGATGAAAAAGATC AAAGCAGTGCGCAAACCTGAGCAGATTCTCTTACGGAGACATGGCCTTTA GAGTGAATAGTGGTATCAGAATCTGCTCGGCGATAATAGATGTGGCGGCT TTTTTCTATGCATAAACATAATATTTTCAGTTATTTAGATATTTCTTATT TTCGGTTTGTTTATACTATCTACACAGGTGTTCGAAAATATGGTAAAAAT TTCGAAGCAATGGCTGAAGTCTTAGGCAACAAGAATGAATCTCACTGTCG AAGTTTCTTCATCAACCACCGACGTCGTTTCAACTTGATGGAAGTCCTTG CAGAGTACGAAAAGGAAAACAATATACCACGTGATCAAAGCAAACTCAAT GATTGGTCAGATGAAATGCCACAAGAACCACACGATGCCTATGGAGGTAT TTTGATATTTTTTTATCTTCACCTGTTTTAGACAACGGATCGGCCTTGTC CAATATTCTGCAATGCTTTTTAAAATCAGGACCCTAGCAGACAATAGACA ACACGTCATTAAAAAGGCTTTGTTTCTTTCTTTGTTCCACTTTTAAAATT CTATTTTCTTAAAGGATAGAGTTTGAGAAGCTTCAATTCAAACAGATTCA AAAAGTTTTGAACATTCTTTTCTCTTTTGAAGGTATGGCACCCGAAGGAG GTCCTCCGCCGTTGGTTAGCAACGCTACTTCCGTCACTGTTTCTTCATAA TGGTACCGTTAGCTGTGGTAAATGCTGAGTGCACCACGATCGAGCTTTAA CACTTTGAATTCTATTTTCTCTCAAGTTCTATTTAAGAGTTGAAATAAAT GGAATCTTCTGCACTATAAAGAGAGACGAAAACTTGATTATTATTTTTAT GGAGGCGGTGATTATTTACCAGTAGTTTTTTGTCAGACCAACACCAATTA TATCAGGAAACACGTGTTTAAACAGACGATTTTGCTTACCGTACATTTCT CTTCTAAATTTTCGATAAAACAATGAATTTTAGTTGGAAACAAAAATTGA TGTATTTTACCATCATTCGAATTTTAAAAGCTGCTTTTTGGACGTTTTTA ATCAACATATTGAGTAAATCTTTTATGTTTAAATCATACCTTTTGATCTA CTTGCCCAAATTCGATAGTAGGCCTATCAAAATTCAATCTTTTCTCTCTC CAATTCGAAAACGTTTGAATGAATTTATTTATTTATTCAAAGTGTTAATT TTTTTGTGGTGCACTCGAGACATGATATTATCAGTCTTTTTGATGTCAAC ATTCAATGACTGCAGTTTCAACTCATCCAAATTTCTCTCGCAAATTGAAA GAAACTTTCTTGGGATCGTAGTCTTTCTCCTCTCAAGGAGATGTACTGAT ATATATACTGGTGATAAAACCCCAAAATTAATGATTTAGTCCCATATCTA CGAGCAGTTTTGGTTTCGACTGCCTCTGTCACAAATTTTCGGATCAATAG AGACCCGAATAACAGTGTTTTTAACCTTTAGTAGTAGTTTGTAGGCCGGT TTGCTTTGTACATACTTTATCCAGTAAAATGTTTTTTTTTATTTATTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064513TCONS_00064513Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064513-proteinTCONS_00064513-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:208739..213837 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.52 4.85 3.38 3.77 38.12 33.82 31.69 34 22.06 22.8 19.62 16.09 11.77 13.7 12.51 12.99 20.97 17.34 8.09 10.54 11.57 9.06 17.58 18.25 18.52 16.45 8.41 7.05 12.65 14.51