XLOC_043221 (gene) - C. hemisphaerica

Overview
NameXLOC_043221
Unique NameXLOC_043221
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_498:316792..325098-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043221 ID=XLOC_043221|Name=XLOC_043221|organism=Clytia hemisphaerica|type=gene|length=8307bp|location=Sequence derived from alignment at scaffold_498:316792..325098- (Clytia hemisphaerica)
TATCAACGCCAACAATAATTAACAATGACATTCGCGGATATCAACAATAC ATGCTACCTCGTATCTTTCTTTATATTTGGGATGCTTGAAACCTTACTAT GTAGTGGAATCACATACGGATGGGCTAGTATTGTCTACGTTTTCAAAACG GAATATTTCTACATGCACTTATGTGAGGATTGGTATGCAGCTCAAAACAA ATCCTTACCGACTCCTAAACCAAGATTATCCGCTATCGACTTTGTCTTTA AATCCAATCCGGTAAACACAGAACCCGGCGAATATCCCATCGTCCGTGGT GGAGCTGCTTATATTGATGATGGTAAATTACCGGGCTGTCCGGCTCAAGA TGCAAGATTGAATTTGATTTTTACAGTATCGTTGTTTTGTTTATGTGGTA TTAAATTTCCAGCTGGTATTTTTATCGATAAATGCGGACCAAGGATTGCA CGTGCCGTTGGAGGGTAAGATCAGTATTTGTTGTCACGAAAGAACTCTTC TATGGCCTTTAAGTTCGGCTCCTTTGAGACAGAAATGGGCTTATCCAATA GTGGATGCACAATTTCTCTCTTGAAAAACTCGACAATACACGATTTTTAT GTCTCAGTTCCATCTATCATGTCGAAAGCGATGGAAAAATCTTATTAAAA AGCTAATGCTCTGGCAATAGCTAAAATATACATTTTTCTATTTTTGAGTC ATATTGTTACAAATAGTTACTCTTAAGGCCACTTTTCCGCAACATGAGCG AAAACTTTTTAACGTTTTTGTAAGATCATTGGTCGGTTGAAAAATGAAGC AATTCCATTGGTCGAAATTGGATGAAAAACGGATGAATTTTTTATGACGT ATTATTCTCTTCAGGCAAAAAAGGTTAAGAAAAAAACTGTCGCCCATTTC GCCAGTCTTCAAGTTGAGTTATTGTTATTGTTTATTTAGGACGATGTATA TTCTCGCCTGCATCGGTCTTGGGTTCGTCTCTGTTGGTAAGATAATTTAA AATTCTATATTTTTTCAAATTCAGAGGATAGTATTGTGGGATACACTTTC TTTTTAACCTCATTTATCCCTGGTAGGGTTGCAAAACGCAAAGCAACGAA TAAGTCCTCATAAGCAGATAAGATTTTTGAGTATTTCAATCTCTCGGGGG TTACACAAAATTTAGCGTCCAACTTGGGAATCGTTTTCGAATCTCCATTG GTCAATAAAGATCTTACCCCCGGTCTTTTTGCATCTTTGAAAAGTTCAGT TTAAAAAAGTTTTTCAGTTGCATTGATTTATGACAAAATGTTGCATCTCT GCCGAGAAACTTCGACAATCTTGGCCGATTTGTTGCATGAAGTTATGAAT TTTCATAAAATGTTTTCTGAGATTATATCATGGACTCGACAGCTGATTGG CTGTAAGTGACGTAAAATCAGTCAATACGTCACTTTCAACCAATCAGCTG TTGGATCCGTAGAAGACATTGCAATGGTGCATATCATGAATATATCATTT CGGTAGAAAATTCGTCGGTAAAAAATGACGAAAAAATCGCTGCTGACGAA ATTTTCCTCCAACAAGTTTTCTACCGATAAGGCGTGTTCAGAGTAAATCT ATAGTAACAGAACCATGTTTGTGCTTCATCATTTTTAGGGTACGAAGATA TTTTGTTTGGTGTTTTTGCAATGATATGTATGGGTGGAAGCCTACTTGTC GTTTCTGTCTACCAAGTAAGTCTGTTATCCAACTTAAAGGTTTTGTTTTT ACATAAGTGTTTCCGTTTCATATCGGACATATATTCCATATCAGGACAGT GTCTGCCCATTGTTATATTATGCTGATATAAGCTAAAAATGTTTTGCTTT CCCTCTTTCTGACCAATCTTGCTCCACATCCGTGTCAATCCAATGTTAAA AAAGCTTGTGAAATTGACGAGTAAGCAAACGATACCACTCTTATTTAAAA ACAAAACCTTTAAGCAACCAAAATGATCTGAGGTCATTCTTGAAGGGTGA CTGTTAGAAGAAAGAAGCCAAGGTTTACGCACGTGTCCCTTTTTATCCTT TTAATTTACTTGGCCGTGCTCTTTAACGAGAATATTGCACCCCAAAACAG TACACGTTTGTTTTATAAGAACATCCAAAATTTTAAGGAGCCTTTGGAAG TTTATAACTTTTTGAGTTCTATGCTTAAAAATCTTCTAAAATGCTCATTT TCACCATTTTGTGAGCATTTTTGTGTGAATTCGGGATATTTTTATTACCA ATTTATCTTCACTTCTAATTCGACAGGTTTTATGCCCCCAGCGGTTTGTC TGAGTTTCCTAAATGGGCTTTTTCACTTTTGTGAATGCGTGTAAATTTTA AAGCTGCGTGAATGCGTGAATTGGAAAACTTTACGTGAACAATAATTGCG TTAATTTCGAAAAAGAAATTGCGAGAATTTAAGGTCTACTTGGGGCCTCT ACAAACACTGTTAAGAATTGTATTACTTCGTATTATTTTTACTTTCTAAT AATTTTGTTTGTATTATTATTTTGTTTTCTTGTCATTTTAGGTCAGCAAC ATAATTTTCCGACAAGCTCGGTCACGTATTATTTGTATTTTACACGGTGC TTTTGATTCATCCGCTGTTATGCTTCTCATCTTCAAAGTGAGTTTGCTAA ATACAAGTGCTTATATTTATATTTAACGGAATTATTTCAGGGTAAATTTC TCATTTACGTCTTTAGAGCATTCTAAAGAGAAATTAGGGTGTTTTTAAGC TAATCAAGGAAAGTGTAGTCTGTGGATTTAGCTCGTAATCCGTCGGTTTT CTAGACGGTTTTCTATTTTAGCGACAAGTTATCTTTGAAAATCTCTGGAA ACCTTGGAAATTTTATCGAAATTTTAAATATTCGTCAGAATAAAATCTTC TCTCTTTTTCTTCAATTTAGATGATTTACGATCATGGCATTCAATACCGA TACATCATGTTCGGTTACACCCTCATATGTCTCGTCCTAATCCTAATCGG AACATTCATCCTGATACCAAGGCTCTATAAGCTCTTCCAATGGATTGAAG AAGAAGCTAGGCTTCAAGGCTATTACGCTATTAGAAGAGATTCATTCGCA GGTCCCGATTTTGTTGTTCGATCTCTTGGATGGGAAAATTATGCTCAAGT CACATATGAGTAAGAATATTCTATTTCTGAGAATCCTAAATTCTAAAATC TCCGAGCCTTGAAACTTGAATCTACATTTTTTAGGCGTATGTCATATATA ATGAACTCTTCTCTAGATGTATAATTTGAACTCGTTTTCAAAATAAACTA ACGAGTTATTTCAACAATCGTTACATGGTCTATGCCCGAGTATTTACTTC CAGTGTGCAACAGCTTTTGATTAAAGTGAAAATTGCAATATTTTTTGAAA AAAGTTGTGTCTGTTGTGCTATGGATAATAAGTGTTTATGGTGAAAGGAT AAAAACACTGGTCTGGAAGGCTTTTGTCTCTTTTTATTGTTGAAAGATGG AGCTTACGTACCAAAATCGATTTAGTTTGCAAACTTTTTTATCTAATCAC ATGAATAGACCAACCGCAAGAGGAGAATTTGGTAGCGTGATCAAAAAGTA TGCAAATCGCAACTTGCCTTTTGTTTGTAACAAGAAAATTGAACAAAAAG CTACAACAATACATTGCCAGACCGGTGTTTTTTATAATGACTATGGTGAA AGGAAAGTTTAGCCATCCTACGTTACCGTCAAAATACTAAGGCTAACTAA GAAATTGAATGATAAAAAGCTACTGTTTTGAATGATATCAAGAAAATTGG CAAATATTTGGTTCCCTATGTTTCCAGAGCTCGTCGTAAATCACGCACTC TTACTTACGGCTCAACAAATGATAGTATCGGCAGCATCAAAGAAGAAAAT GGTCTCGCTAATTCATACGAAGATCACAATGAAAACGTAGATGTTTGGGA AGGCGAGAACGAACCACTTGTCAATCAAAATCAAATGAGTTCAAAATCTC ATAAACGATTCGGAAAAGGTAAACTTTAGCTAAATCCTCTTCCAAAAAAA AAATTCATAGTCCACATAGTCTGATACATCGATTTTCTTCCATACAAACA TATGACTTTTTGGTCTTAATAAAATATATTCATGATTCTATCATAGATCG GCCCTGTCAGGTGGTACATAATGCCTTAAACTATGATGCTATTGGGCCAT CCCATTTTATATCCATACAGGGGGTGGCCGAACATTTCCAGGGGGTGACT TGAGCAGAATTTCCATGAGGTCTAAAAGAGTGTTTTTTCATTTTTCCAGG GGGTAAAAAAAAATTTCCTAGGGGTAGAAGACTGATTTTAGTTCGTGGAA TGGCCCATTGTTGTCATAGGTAGACTAACTTCAACAACTGAGGAATACTG TCAAGTTCAAATTTTCACAAAGAATATAAACGAACAAAAGGAAATAAAAA ATCAAAAAAGGTATTTTTTGCGAAAATGCTTACGTTAGCGGAAATAGCTG ACTGACGCCAGCTAAAAGATCACATTTTTTGGCTTTTTTGGATTTGTTTA TACCTTTTGTCCAAATTTGATCCAAAAATGTTTATCCAATTTCGGTCATT CGCGTTTGTCTACCTATAACATCATCAAAATGGGAGATTTTTCTTAAATT TTTCGAGCTTAGGGCATTATATAACATCTGACAGGGCTGATACATGACAG CATAACGAGTACGCTTTGTTTGAGCCCAAAAAGTGAGATGTTTTTATGGA AAGATTTATTCAGTTTCGGAAAAATTTAAATAGAGTGCCTTACGGTAGGT AGTAGGGGGCCAAGCCTAGGGTCCCGTGGCATCTTTTTTACAACCTAGTC ATTTTTAGTCTATTCCAAAGAACATTATATTACAAGATATTTTTGAGAGG GAGGACGCGGATTAGGCCCGGGAAAACTTTTTATGACCAAAAAGGGGAAA ATAAGGGGTAAGAAAAGAGCTGATTTTCAAAAGTCAAAATAAACGAAAGT GATTGGTACCATCTGAAAGACCATGAAAATTCTGAGTAAAAAAAATATTA CAACAACTCTCTCAGGCTTTGCTCCCTACTAAATGTAATAGTTCCGAAAA AAATTGCTGTATTTTTCTTTTTCAGGTTCCGTATTGAACTCAATATTATC ACCACTATATTTATTCGAGTTGATTTATTTGATTGGGTTCCAATTGAAGT TGTGGTATTTTGTTGGATCAATGGCTGATTTTCTTGGAAGGTTGACTTTG AACGATAAAACACTAAGTAAGTCTGAATCATCTTTTAATAATAAGTTTCC CTTGTTACTTGCCTCTACTGGACATTGAAGACGACCTGCTATTGATATCA GAAGCGCGGTGGGTCGACAAAAATTCGAGAAAACTGGGGAAGCAAATTTT GATTATGATTTTGGCGCCCCGCCTATGAAATATAAATATCTTTGTAAAGA TTACGCGAGCCAAAATTTGGTATCTTTTCTCTTCTTGACCGAAAACTGCC ATATCTAAGGTGTAAAAGAGCAAAGGGGCGCCGTAATTAGTAATCAGAGG TGTCTTTTTGCGTCCTTTGTATTTAAGCGCCCAAAAGAAATCGGCCGCGC CACCACGCTACTGATTGATACCAATACCATGAATAAAGCAGGGACAGGGA GTTTCTAAAAAGCGATTTTCCCTTAAGATGTTGAAAAGCCCTATTTAAGA AGGTATTCGGACTTGGAGAAAAGCCTCAAAATAGGAGGAAAGGAACCATA GAAAGTCAAAAATCATTCCTTGTTCTTTTAGTCAGTCAATATGTTGACAT TTTCGGTTACGTACAATTCGGTGGTATCCTGGTCACCCCTTTGATTGGCC TCGTTTTCGATAAAGACCGTTTGACTGGTAAAGACAAGGAAATTATGATG ATGTCAGCACATGCGCAAAGAATCAAAAAATTGAGTGATTGTATAGCACC TTTCGCTGTGACCAACATCTTATGCATGATCTTTTGTGTGACGTCAGCTA TCGAAAACCTTCACTTACAGGTAAAGACTTTCTTTTTGAAGAATTTCAAA ATTGAATTTTTGTAAAGTAAAACTGTTTTGTAAAACCGAGCTTCTAGAGA TCCCTTCCTAAAATTTCTACAAACTTTTGATAGTCCCCCCTGGGTTAACC TAAATTTTGACATTGATTCCATTATTTTCTCAACATTGTAGGTTGTATCT TTCGTACTGTACGCCATCGTTCGTGGATTTCTTTATTCAAACCATGGAGC TTATATGGGAGCTGCGTAAGTCATTTTTTATTCTCAGCTGGCTCACAACG TTTTATCGACGTTTGTCTAACGTTCACAACGTCCATATAACGTTCACAAC TTCCATGTAACGTTCACAACGACGTCCATGAACGTTCACAACGTCCATAT AACGTTAAATGAACGTTGAAACAACATTGCGTGCCAGCTGGGTTACCGGA CCCCTCTCCACTTTTTCTTTTGAGGGAAAATAGCCGTGTCAAGGATCGCT AGTTTTGGCGCCTCTTTGCTTTTTTACACCCTCAAAACTTGCCTCTTTTA GACCTACCACGTTCTCACGGGAGGGGGAACTCAATTTGAAAATAAAATCT AATTTACCATTATTGAAGAAAATATGAGTGAAAATATTTTAACATAAAAT TTTGTTGAATTATAAATTGGCTCTGATCGAGTAGTGCTACTTTTCTAAAA ACTAAAAACGATCAAATGGCGGATTTAGCTTGGTGGTGCATTGTTTATAG AGGTTTATTTCATTCCTCTTCACTCTTCCATAGATTCCCAGCCAGTCAGT TTGGAACATTATATGGTCTTGGTATTTTCATCGGAGGGACTTTTGGAATC TTTCAATATGTTTTGTTCAAAATCACGTCAGGACCGTTGCATGGTGACCC ATTCTGGGTAAGTACTCTTTATTCTAGAGGAGAATGCAAAAAGTTAACCA TGCTAGCCATCAGTTTGGACCTCCACATTGCTAACTACTCTCAGTATTTA TTCTGTCTAAGACAAACCAGCGAGGTATAAATAGAGGCTTTTCTTTTTCA AAATTCTGCAAAATTTGAAGAATTTCATTTGTTGTTTAACGTCCAAATAG AGGCTCTTCTTTTTCAAAATTCTGCAAAATTTGAAGAATCTGAATTAGTT GTACAGTCTATCAAACAGCCATCAAGGGGCTTCATAAAAAACCCTGATAT TAGCAAATGTGATAGCTTCCTACTAGTCTTTAAAGTACTAACACATAATC CCAAGATGCTAAAAGAAATTTCACATAACTCCCTACTTTAAATTCAAAAC TTACTTTAATCCTTTTTATAGGTGAATATGTTTTTGTTGGCATTGGTTAG TATTGGCAACATCCATCCATTGTACCTGTGGTGGTATTGTCGAAAACAGA AGAAGAAAATTCAATGTAAATAATTAACTCATGGTTTTGATATAAAGCAA AAAGATTTATTATGTCTAGAAGTAACATATCTTTTCCGCCAATATGGAAA ACTTGCATAAGCGAGTGGGTCAAGTCATGATAGGACTCTTACAAATCGAG GACCAGAAAATACCATATTTTGAGTTGATGATGTGATCCCTCTATGATGA AAATAATCTAAACTGACGGTAATGACTGGGATCTGCTTGGAATGGAGTGA AACTGATATAGAGCTCAGGTCACCAGGGTCTAATTTGAAAGTCAAAGGTG CAGCAAAAAAGGTTTCTATTATTTTGATTAAATTTAAGGAATTTCAGATT TTTTTTTCTTGCGCACTTCTTTTATTAGAATAGCCAGAGTCGGAAAAAGT ATCTACGATATTAAGCACCACTGGCAAAACTTTTGCCTTGAGAAAAGTCC GCAACTTCTAAATAAGAATGCTCCAAAATGTTCTAAAATGTTTAATCTTT GCCATAATAGTGTGGATAGAGTGGATGCCACAGAACTACTCCTAAGTAAT TCTAATTAAAGGTTTGAAAATTTGAATTCATCCGACTCGGAAAGATTTTG CTCTTCTTTGTCTTCTGTTATTTCTAATGACCTCCTACCTTGCCTACGAG AGTACATTAATTCACGAATTCAAATATTTAAGGCCACTTTCACCCTGGTA AACACGACCCTGGGTACTAAATATTTTGAAAATCATGTTTTGTTCACCTT TTTATTCTTATGTTTCGTTTAAAATGCACTGATTTTTTTTAAATCCTATA AAATTATTTTAAAATATTTGTATTATATAAAATGATGTTGTAATTTTTTT GTAAAAAATTTTGATTGAAAAAATAAGAAATTAATGATTAACTGTAGAAA AATTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069357TCONS_00069357Clytia hemisphaericatranscript
TCONS_00069356TCONS_00069356Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069357-proteinTCONS_00069357-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:316792..325098 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC43A1PREDICTED: large neutral amino acids transporter small subunit 3 isoform X1 Homo Sapiens
SLC43A3solute carrier family 43 member 3 isoform 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
73.83 69.05 153.06 136.92 1.34 1.08 10.4 11.57 10.38 12.82 12.16 16.83 0.23 0.21 0.36 0.51 0.41 0.41 0.14 0.18 2.92 2.4 22.54 20.48 1.34 1.67 1.1 1.58 12.9 14.27