XLOC_043777 (gene) - C. hemisphaerica

Overview
NameXLOC_043777
Unique NameXLOC_043777
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_52:182796..186225+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043777 ID=XLOC_043777|Name=XLOC_043777|organism=Clytia hemisphaerica|type=gene|length=3430bp|location=Sequence derived from alignment at scaffold_52:182796..186225+ (Clytia hemisphaerica)
TTAACCATACTAGTGTCCCGCACAAATCACGTATCAACAAAACGAATGCA
GTGAAAACTCTTTATCATTTACTTGCCTTGGAGGCAAAAGAAAGTGCCAC
AAAAGTTCTAAAGGATGGGGTTCTAGTCTGAGGCCTACACAATAGGGTGA
GCAAGATAAAGATTAAAAAGTTGCTGTTTTGATGCACTTTAGTGTACTCT
AGATATCTAAGATTAAGTCAGTGtggtaacttggtctaatgttttCATCT
CCCATCTAATTTAGAGCTATTTTTTCAGGAAGATATTATAAAAGTTTATC
CAAGTCTAAAAATGTTGATCAAAGTGAAAACACTAACTGGAAAAGAAGTA
AGTAAATTTATattagttttaaaaataataCTTTAGGACCAACCACATTC
AGATTGGTTTTGTttgaaataattgtttttctCAAACGATTTACATATTT
CTTGCAAAGTATTTACATAACTATACATTTTATCTTTCAGATTGAGATCG
ATATCGAACCCAATGATAAGGTATGTCCTTTATAAGAGAATCATACATAG
AACACAGTGGGCACCCCCTGGACTCATGAGAGGTTGAGAATTTTCAGATT
TCTAAAGGAAGGTGGGGGTTGAtttgatgagaaatttcaggtgggggtaa
acCTATGTAGGTGGGGATGACTTTTTTCAGGTGGCGGTTATAGATTTTTC
TGTATTTCTTAGTCTTCTTAAATCATTTTTGACACATACTAgaggaaaat
taaaaaacatgcaAAAAAATGCCATCCATGTTGAAAGTTCATTTTATCGA
GGTCCTTAGGTCTTGCAGTCGCAATCAGGTCGAGGTTCGAAGACTTTATA
AATTTATGTAGGGATTGTTGGATAAGGTGGGGGTTCCGATAAGATATTTC
CTTTTGAAGTTCAGTTTGATATGTGTGACATCTCATcccttttttattgt
tttatggTACCAATAATCCATCCTGCTGCTTAGTAGAATAAATTCCTCCA
CTGTGGTCTTTTCATAAAAGAATTTGTCTGATATTTATATATGTTTCTTT
CAGGTTGAAAGAATCAAAGAACGAGTGGAAGAGAAGGAAGGAATTCCTCC
TGCACAACAGAGGTAAGATTGCTTGTGCTTTAGGGCTGTTTCTCttctag
gctgcacgcatcccctctgatgtGCTTTAGGGCTGTTTCTCTtctaggct
gcacacatcccctctgatatgctTTAGGGCTGTTTCTCttctaggctgca
cgcatcccctctgatgtGCTTTAGGGCTGTTTCTCTTCTAGggtgcacgc
atcccctctgatatgctTTAGGGCTGTTTCTCttctaggctgcacgcatc
ccctctgatatgatttgatataggatgcgtatcgtctaaaatatttctgt
cccgtcttttcttttttcttttttgattatgcgtcatagcaatacaatga
cttctttttttctttgttcaatgaatgaaaattaataattatgaaaacaa
cagcacaatgacttcattttttttctttctttgattggatgtgacgaaat
tatgtaaatttatgcaaattttggttaccccaaatttggggtaactctcg
gacgagaatttcatacaagatacgcatcccctataacaaaataaattctg
gggatgcgcgcagcctatTTCTCTTCTGGATGTACATTTAAGAGCAACTT
TCAAAAGACTTCTTAGCTATGTAAAAACTACAAAGGGCAAAATTAGATAG
TTTagttaaatttcattaattttcttGTGCCTTTTTATTTTTCCGCACCT
TTTAGATTTGGGAATGCATGTACCTTTGATTTTTTGTGTATATTTTGTAA
CTTTTGGGATAGTTTTTGAGtgcttttgacaaaaaattaaggTACTTGAT
AGAAGACTCGTGTCTAAAAAAGAACGTGAAGATAAAATTTCTACACATTT
ATAACTTTTACTGTATTTTTGcatcttttaatttttgggcGCTCAAGTAA
ATTAGCCTTTTTTGTNAATTTCTACACATTTATAACATTTACTATATTTT
TGcatcttttaatttttgggcACACTCAAGGAAATTAGCCTTTtttgagc
atgtttttgcatgaaaataaaAGGCGCAGGAAAATTGATGGAATTATTTT
AAGATTACACAAAATATGGTATAACTATTTTTATTATCAGAGAATGCAAA
ACAGAGAAACAGCTATTGTTTGACCACTGTGTTAAAAGAAATAAGAGAAG
AGAACTGTCGACTCCAATTACattatttttctctatttctttTCAGGTTG
ATTTTCAGTGGAAAACAAATGTAAGTCAGAAATGTCAATTATTTGATATC
TACCATGTTCttatacagggggggggggtggacgaaccttttttaaggca
aaaaaatatttttagaaatatggTAATACCCCctagaaaatggcaaaatt
tgcaaaagaagtcttggaaaattattttaacttaAAAGTAAGGGTGGACA
AACAAAAATTAGTCTATTACCgcctggaaattttagattaACCTATGACc
tactggaaaaatgaaaaaataccccCTATAAATTCTTTTCCAATTagccc
cctggaaatgttcgtcctcCCCCCTgtccccctgtatggatataaaatgg
aatgacaCATTCTAATCCAGAAACAAATCATGTATATTCTTCAAATCAGC
TTCTTGATTCTGCCAGTAATACAGGCAACTTTCTGCCTTTCTGTTGTCTT
GAATCTTTCACAGTTCGTTCCCCCCTTAGGTGAGATTATTGTCCTCCCTC
ACCATCccaagggcttttgatgtgttcaacaacactctactcggcgggtg
cgacgccgggtgacggctaggatgacaccttccgaaaaaatgaagaaggg
ggaggggaaatcgaaaattttcatgaaaaaagggGGATGGCAAGGAAGGA
GGATAGTTTAAAAAGAagctgattttacgtcacttacaaccaatcagcta
ttgggtccgtggtGTAATGCCAGAAgttattgcaatggtgcatatcatga
atatattgATTCTTTTGGTTTCATGTTTTGCAGGAATGATGAAAAGACAG
CTCAAGATTATAAAGTCTCCGGAGGATCAGTACTACATCTTGTATTGGCT
TTACGTGGAGGGTCGTAATTTCGATCTTATTATTCCAAATACTCATTGTT
GATATTACTTTGCATTGAATGTATAACAAAAACATCATTGGGGATGAAGT
TATTgtttatttaaaatgaaaagacaAAAATAGTTTCCCTAGTTTAGACC
TTTTGATCAGTAGTATTGATATACTTTGTAAATTTTATTGCCTTTTGTTA
TATATAAATACATTTATGTTTTTTTAGCATTCTTTAAAAACTGTTCAAGT
ATTAGGATGAAAGATCCTTTTTGGCTaatg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070299TCONS_00070299Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:182796..186225 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
253.8	237.78	341.38	374.14	50.88	37.62	53.01	60.34	81.99	63.1	54.16	59.9	43.99	38.31	73.1	65.18	120.12	104.35	38.03	43.95	72.39	72.02	155.03	143.85	64.14	57.08	100.06	74.84	82.25	78.03