TCONS_00004949-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004949-protein
Unique NameTCONS_00004949-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length395

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004949-protein ID=TCONS_00004949-protein|Name=TCONS_00004949-protein|organism=Clytia hemisphaerica|type=polypeptide|length=395bp
MSNIDWNEILEKVVHYIKLAYTTFWNFLESLPIPPEQTLGITAGVIVFIW
LVTCCICCRFCRPKEEKAEVPGKLDLRKNHLFGPNYRERTFQRVDEMDYN
IEATQFDALSEIKLAQIRYTVDFDQEESIAIVTVHECKDLPPEPEDEEAP
DPYVEVKLKPAAKKSYKTKVKNNNHHPKFEETFNFKKIIYNGFKMSDLIF
RVMHDDFGKDDLLGEAIVSIKDLDMSKGKVTKVQVLAPEFKSEAKVPWKD
TKLGHICIGLGYAPNSSVLAVFILSCKNLAAVDDSGFSDPYVTFFLIRDG
KKIKKRKTTFKTMTLNPTFNASFAFEASYDDLDELSLLFCVADYDKGEPG
EPIGQCVIGQLGNTDLGAVQWKNMMDGPNKPWLVWHMLRPIPPKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002797XLOC_002797Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004949TCONS_00004949Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPRINTSPR00360C2DOMAINcoord: 313..326
score: 46.26
coord: 284..296
score: 50.0
coord: 337..345
score: 45.09
IPR000008C2 domainSMARTSM00239C2_3ccoord: 268..373
e-value: 4.8E-13
score: 59.3
coord: 129..232
e-value: 1.1E-15
score: 68.2
IPR000008C2 domainPFAMPF00168C2coord: 132..229
e-value: 1.6E-17
score: 63.6
coord: 269..359
e-value: 5.8E-14
score: 52.1
IPR000008C2 domainGENE3D2.60.40.150coord: 243..392
e-value: 2.7E-26
score: 91.6
IPR000008C2 domainGENE3D2.60.40.150coord: 103..242
e-value: 4.1E-24
score: 84.3
IPR000008C2 domainPROSITEPS50004C2coord: 269..357
score: 15.281
IPR000008C2 domainPROSITEPS50004C2coord: 132..217
score: 14.63
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 253..390
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 110..229
NoneNo IPR availableCDDcd00276C2B_Synaptotagmincoord: 254..388
e-value: 8.91078E-46
score: 154.664

Blast
[Close]
BLAST of TCONS_00004949-protein vs. Swiss-Prot (Human)
Match: SYT11 (Synaptotagmin-11 OS=Homo sapiens GN=SYT11 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.097e-40
Identity = 88/280 (31.43%), Postives = 145/280 (51.79%), Query Frame = 0 
Query:  111 EIKLAQIRYTVDFDQEESIAIVTVHECKDLPPEPEDEEAPDPYVEVKLKPAAKKSYKTKVKNNNHHPKFEETFNFKKIIYNGFKMSDLIFRVMH-DDFGKDDLLGEAIVSIKDLDMSKGKVTKVQVLAPEFKSEAKVPWKDTKLGHICIGLGYAPNSSVLAVFILSCKNLAAVDDSGFS-DPYVTFFLIRDGKKIKKRKTTFKTMTLNPTFNASFAFEASYDDLDELSLLFCVADYDKGEPGEPIGQCVIGQLGNTDLGAVQWKNMMDGPNKPWLVWHML 388
            ++ L  + ++VD++  +   +VT+ E   LP   +  +  DPY+++ + P  +   KT+V      P F+ETF F  I Y+  +   L F V+  D F +DD++GE +V +  +D S GKV   Q+     K   +   K    G + + L Y P +  + V +L  ++L  +D +G S +PYV   +    K+I K+KT  K  TLNP FN SF ++   D L ++S+ F V D+D+    E +G+ ++G    T  GA  W+ + + P KP   WH L
Sbjct:  155 DVMLGSLTFSVDYNFPKKALVVTIQEAHGLPVMDDQTQGSDPYIKMTILPDKRHRVKTRVLRKTLDPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKV---QLTRDIIKRNIQ---KCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSGNPYVKVNVYYGRKRIAKKKTHVKKCTLNPIFNESFIYDIPTDLLPDISIEFLVIDFDRTTKNEVVGRLILGAHSVTASGAEHWREVCESPRKPVAKWHSL 428
The following BLAST results are available for this feature:
BLAST of TCONS_00004949-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT111.097e-4031.43Synaptotagmin-11 OS=Homo sapiens GN=SYT11 PE=1 SV=... [more]
back to top