TCONS_00048424-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048424-protein
Unique NameTCONS_00048424-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length679

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048424-protein ID=TCONS_00048424-protein|Name=TCONS_00048424-protein|organism=Clytia hemisphaerica|type=polypeptide|length=679bp
MDKLKLRRFVSGEYGICCDKLFDTLVKDPRFNTGLTYNDYENMPLHEYRL
IQNKRARALAEYQFIEIENVIDNPVSPAAYCDAASFIEWSAAMKYFLNRS
LFSMTIYTSTTNPEPLEIAGKADRMEILGAFALTELAHGSNTKGMKTTAH
YDPKTQEFILHTPDIEATKCWSGNLGQSATHALVYAQLYTPDGVCHGLHS
FLVQVRNKERLPMPGITVGDMGHKLGLNGMDNGYLKLNKVRIPRTNLMNK
QGDVTPEGKYVSPFKTKNARFGAVLGTLSGGRVGITGLATCNLIMAVTIA
LRYSVCRKQFGPVEGGPEIPVIEYQMQQWRLIPYLAGAYVWHSFAVWFNT
RFFEITVRRYTGVQLPPDEAAAEGREVHGLSCASKPVASWLARDGIQEAR
EACGGHGYLAVNRIGDLRNTNDPNCTYEGDNNCILMQTSNYLLSIYKDIC
KGKKINSPLGSLNFLSNLETIAQSKGNIQSPKNISKQDVEGALQWLVVYF
LKNSNKRLIERNGVDPDEFTARNNSQVFFCRSLAIAFIQNFAMERFGNDK
AFSPDCPAEFAEALQNMYMLYGLWIIEKNLGTFYQGGYFSGDKAGHAIKE
AILDYCLRLKKDVLPLVDALAPPDWVLNSPIGHSNLKPLENLHDAMVTPQ
SQERAPWWRELSDPVDAGSKSDLIVQSKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030800XLOC_030800Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048424TCONS_00048424Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR012258Acyl-CoA_oxidase
IPR013786AcylCoA_DH/ox_N
IPR002655Acyl-CoA_oxidase_C
IPR009075AcylCo_DH/oxidase_C
IPR009100AcylCoA_DH/oxidase_NM_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006631fatty acid metabolic process
GO:0006635fatty acid beta-oxidation
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0071949FAD binding
GO:0003997acyl-CoA oxidase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005777 peroxisome
molecular_function GO:0003997 acyl-CoA oxidase activity
molecular_function GO:0071949 FAD binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.140.10coord: 489..620
e-value: 2.2E-24
score: 85.4
NoneNo IPR availableGENE3D2.40.110.10coord: 129..241
e-value: 1.0E-23
score: 82.9
NoneNo IPR availableGENE3D1.20.140.10coord: 242..456
e-value: 3.5E-42
score: 143.5
IPR006091Acyl-CoA oxidase/dehydrogenase, central domainPFAMPF02770Acyl-CoA_dh_Mcoord: 130..240
e-value: 3.7E-16
score: 59.0
IPR012258Acyl-CoA oxidasePIRSFPIRSF000168Acyl-CoA_oxidasecoord: 18..668
e-value: 4.1E-158
score: 525.8
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalGENE3D1.10.540.10coord: 5..127
e-value: 2.9E-4
score: 20.6
IPR002655Acyl-CoA oxidase, C-terminalPFAMPF01756ACOXcoord: 489..664
e-value: 5.6E-35
score: 120.4
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 489..661
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 270..461
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domainSUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 90..253

Blast
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BLAST of TCONS_00048424-protein vs. Swiss-Prot (Human)
Match: ACOX3 (Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2)

HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0
Identity = 307/679 (45.21%), Postives = 414/679 (60.97%), Query Frame = 0 
Query:    5 KLRRFVSGEYGICCDK-LFDTLVKDPRFNTGLTYNDYENMPLHEYRLIQNKRARALAEYQFIEIENVIDNPVSPAAYCDAASFIEWSAAMKYFLNRSLFSMTIYTSTTNPEPLEIAGKADRMEILGAFALTELAHGSNTKGMKTTAHYDPKTQEFILHTPDIEATKCWSGNLGQSATHALVYAQLYTPDGVCHGLHSFLVQVRN-KERLPMPGITVGDMGHKLGLNGMDNGYLKLNKVRIPRTNLMNKQGDVTPEGKYVSPFKTKNARFGAVLGTLSGGRVGITGLATCNLIMAVTIALRYSVCRKQFGPVEGGPEIPVIEYQMQQWRLIPYLAGAYVWHSFAVWFNTRFFEITVRRYTGVQLPPDEAAAE---GREVHGLSCASKPVASWLARDGIQEAREACGGHGYLAVNRIGDLRNTNDPNCTYEGDNNCILMQTSNYLLSIY-KDICKGKKINSPLGSLNFLSNLETIAQSKGNIQSPKNISKQDVE-GALQWLVVYFLKNSNKRLIERNGVDPDEFTARNNSQVFFCRSLAIAFIQNFAMERFGNDKAFSPDCPAEFAEALQNMYMLYGLWIIEKNLGTFYQGGYFSGDKAGHAIKEAILDYCLRLKKDVLPLVDALAPPDWVLNSPIGHSNLKPLENLHDAMVT-PQSQERAPWWRELS--DPVDAGSKSDL 673
            +L  F  GE  +   K +F  L  DP F      +   ++ L +YR +   R + + EY F+ +E++  +P+   A        + S A KY L+  +F   +Y+S +    L    K  RMEI G FALTEL+HGSNTK ++TTAHYDP T+EFI+H+PD EA K W GN+G++ATHA+V+A+L  P   CHGLH F+VQ+R+ K  LPMPG+ VGD+G KLG NG+DNG+   +KVR+PR +L+N+ GDVTPEG YVSPFK    RFGA LG+LS GRV I  LA  NL +AV IALR+S  R+QFGP E   EIPV+EY MQQWRL+PYLA  Y    F+        E+     +G     D +A +   GRE+H L+ ASKP+ASW  + GIQE REACGGHGYLA+NR+G LR+ NDPNCTYEGDNN +L QTSNYLL +    +  G    SPL S++FL     I   K  + S  +     V   A +WLV Y L+ + ++L +       +F ARN  QV   R LA+AF++   ++RF ++    P  P      L  +  LY LW + ++    Y+GGYFSG++AG  ++ A+L  C +LK D + LVD +APPD+VL+SPIG ++ +  +NL  A++   +  ERA WW E S   PV    KS L
Sbjct:   34 ELALFTEGEGMLRFKKTIFSALENDPLF----ARSPGADLSLEKYRELNFLRCKRIFEYDFLSVEDMFKSPLKVPALIQCLGMYDSSLAAKYLLHSLVFGSAVYSSGSERH-LTYIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSIVSLAILNLKLAVAIALRFSATRRQFGPTE-EEEIPVLEYPMQQWRLLPYLAAVYALDHFSKSLFLDLVELQRGLASG-----DRSARQAELGREIHALASASKPLASWTTQQGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYEGDNNILLQQTSNYLLGLLAHQVHDGACFRSPLKSVDFLDAYPGILDQKFEVSSVADCLDSAVALAAYKWLVCYLLRETYQKLNQEKRSGSSDFEARNKCQVSHGRPLALAFVELTVVQRF-HEHVHQPSVPPSLRAVLGRLSALYALWSLSRHAALLYRGGYFSGEQAGEVLESAVLALCSQLKDDAVALVDVIAPPDFVLDSPIGRADGELYKNLWGAVLQESKVLERASWWPEFSVNKPVIGSLKSKL 700
The following BLAST results are available for this feature:
BLAST of TCONS_00048424-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACOX30.000e+045.21Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapi... [more]
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