TCONS_00048474-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048474-protein
Unique NameTCONS_00048474-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048474-protein ID=TCONS_00048474-protein|Name=TCONS_00048474-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
INYTLNFYQLATMRIIDTNFKDTVFTMYFSKGKFKFIRNRFQHSALIIQG
VPEWHLTDSNIHLENCHFQGSYSKQVDIDMSHFMLDITEAKSVTIDNCIF
KSALFGAALIKAMSLTIRNSEFRDCYIEEQYTQAYRAAALMAYNSHYITY
KIVNCTFKNNSAPLGRIGALKTNIHYTQDSKSSLQILNTTIES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030828XLOC_030828Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048474TCONS_00048474Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 18..193
e-value: 6.4E-11
score: 41.5
NoneNo IPR availablePFAMPF13229Beta_helixcoord: 58..191
e-value: 2.8E-6
score: 27.1
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 45..192

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048474-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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