TCONS_00048510-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048510-protein
Unique NameTCONS_00048510-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length238

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048510-protein ID=TCONS_00048510-protein|Name=TCONS_00048510-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
MEMVKTKDSPPSNKKHVFSERLIDKIRERSDSLFLSPSPRLSRKRGSSAG
PSIIEPQGHQRIVVLGPSSVGKSTICATYAGVDYDLSALRYSKKNEIYNS
GVFIQSETANHVKQYNIEISVPKGTRWDGTVNGYKELLLESDGYLLVYSK
ENRQSYMKLVELVSDIQKLRKCCIPPIVVVGNKDDLDFSNTLGIHDSEHH
VLGSFPHFNVSALENDGLQEAFKCLVQMVAQQKILTLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030853XLOC_030853Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048510TCONS_00048510Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 60..81
score: 30.93
coord: 173..186
score: 46.03
coord: 207..229
score: 24.44
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 60..232
e-value: 4.8E-4
score: -59.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 61..232
e-value: 3.0E-4
score: -45.7
NoneNo IPR availableGENE3D3.40.50.300coord: 51..235
e-value: 2.1E-16
score: 59.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..53
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 61..229
e-value: 2.1E-12
score: 46.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 59..233

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048510-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top