TCONS_00048669-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00048669-protein
Unique Name	TCONS_00048669-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	712

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00048669-protein ID=TCONS_00048669-protein|Name=TCONS_00048669-protein|organism=Clytia hemisphaerica|type=polypeptide|length=712bp
MIVPLEESQKSKDALRSAPLASTSSRMNNQMCNFKTVLIVVILFGIVVPL
FIQIALLLQPNTSTSNEDDYLESRKILYEDVDLKKRKIDALEEQIKELTS
VKFKALKFITKLDRQRTYLQRDVFKSSQEKDKLLIELKGLNKKIQIAKRD
AANYQRIRSQKIVTNKIFVGVPLKTDPLIIIAPKTNQDIDCNFQKCFDFT
QCSVIKTFQFHISPSSANSNDLLKSIKGETDYSSNKNGACVQLHSVTLTK
DTSRLASVINKDITDKPGNHLLIINSDSNTNDADLFCKTVHQLIIPANVI
QIQPYLCPTYRASYDLIMPANLPTQTVNNIWKELPPILPVQRQYLVSFTY
AFLPNSDESSKLLLDNLQRLIMNETKERDIFIQSKCTEAYYTSCTHGWCL
CKXLIMNTAKERDIFIQSKCTEGYYKSCTHGWCFCKDNRQISKKSRFCVI
PTYKNNLFLHTNIIETLAVACVPVFIGDHSLLPFTNTIDWKTASVVLHYQ
RLPELIYLLRSLPTEDFISLKRNGRFFYQTYFASQYKYLRTIISNIQTNI
GLHPTMHKDHKAMTIKTIGNAALSNTPQHYFSHNLSTIGVDKHRLWNTYP
GALHTIPVNPFQTPLPSEYQFTVEGVDNYSPIGDGKGGDGIPFARSLGGD
YPVEQFTVLMLTYDREVILMEALQRLSGMKYLHKVVVVWNNPKDPSDTLV
WPDIXNICIKLW

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030926	XLOC_030926	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00048669	TCONS_00048669	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004263	Exostosin
IPR029044	Nucleotide-diphossugar_trans
IPR015338	EXT_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0016757	transferase activity, transferring glycosyl groups

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 74..101
None	No IPR available	COILS	Coil	Coil	coord: 130..157
IPR004263	Exostosin-like	PFAM	PF03016	Exostosin	coord: 305..512 e-value: 1.0E-18 score: 67.5
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10		coord: 653..711 e-value: 2.3E-4 score: 20.3
IPR015338	Exostosin , C-terminal	PFAM	PF09258	Glyco_transf_64	coord: 656..709 e-value: 3.1E-8 score: 33.1

Blast

[Close]

BLAST of TCONS_00048669-protein vs. Swiss-Prot (Human)
Match: EXTL3 (Exostosin-like 3 OS=Homo sapiens GN=EXTL3 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.536e-56
Identity = 174/663 (26.24%), Postives = 300/663 (45.25%), Query Frame = 0

Query:  106 LKFITKLDRQRTYLQRDVFKSSQEKDKLLIELKGLNKKIQI-------AKRDAANYQRIRSQK-------IVTNKIFVGVPLK----TDPLIIIAPKTNQDIDCNFQKCFDFTQCSVIKTFQFHISPS-----SANSNDLLK-----SIKGETDYSSNKNGACVQLHSVTLTKDTSRL-ASVINKDITDKP-----GNHLLIINSDSNTNDADLF--CKTVHQLIIPANVIQIQPYLCPTYRASYDLIMPANLPTQTVNNIWKELPPILPVQRQYLVSFTYAFLPNSDESSKLLLDNLQRLIMNETKERDIFIQSKCTEAYYTSCTHGWCLCKXLIMNTAKERDIFIQSKCTEGYYKSCTHGWCFC---KDNRQISKKSRFCVIPTYKNNLFL-----HTNIIETLAVACVPVFIGDHSLLPFTNTIDWKTASVVLHYQRLPELIYLLRSLPTEDFISLKRNGRFFYQTYFASQYKYLRTIISNIQTNIGLHPTMHKDHKAMTIKTIGNAALSNTPQHY--------------------FSHNLSTIGVDKHRLWNTYPGALHTIPVNPFQTPLPSEYQFTVEGVDNYSPIGDGKGGDGIPFARSLGGDYPVEQFTVLMLTYDREVILMEALQRLSGMKYLHKVVVVWNNPKDPSDTLVWPDI 704
            +K +  L R R  +  ++ +   ++ +L  E+  LN KI+        AK+D    + + SQ        +  N+  + +P++     D   +  PK  +   C    CFD+++C +   F  ++  S      +  + L+K     + +     + N + AC+ +  V   ++   L  + + K +   P     G++ +IIN    ++  +L     T   ++  +    +Q      YR  +DL++   +   +  N + E+PP +PV+R+YL +F         E  + L  +LQ     E +  +  ++      Y         +     +  +K   + ++  C      S    W  C   +D  ++ K S F +I T  +   +      T + E L V  VPV +G+   LP+ + + W  A++V+   R+ E+ +LLRSL   D ++++R GRF ++TYF++      T+++ I+T I +     ++  A  I      A    P                       +  N +    D +R WN  PG  H  P  PF   LPSE +F   G   + PIG G GG G  F  +LGG+ P EQFTV+MLTY+RE +LM +L+RL+G+ YL+KVVVVWN+PK PS+ L+WPDI
Sbjct:   76 VKHVLDLCRIRESVSEELLQLEAKRQELNSEIAKLNLKIEACKKSIENAKQDLLQLKNVISQTEHSYKELMAQNQPKLSLPIRLLPEKDDAGLPPPKATRG--CRLHNCFDYSRCPLTSGFPVYVYDSDQFVFGSYLDPLVKQAFQATARANVYVTENADIACLYVILVGEMQEPVVLRPAELEKQLYSLPHWRTDGHNHVIINLSRKSDTQNLLYNVSTGRAMVAQSTFYTVQ------YRPGFDLVVSPLVHAMSEPN-FMEIPPQVPVKRKYLFTF-------QGEKIESLRSSLQ-----EARSFEEEMEGDPPADYDDRI-----IATLKAVQDSKLDQVLVEFTCKNQPKPSLPTEWALCGEREDRLELLKLSTFALIITPGDPRLVISSGCATRLFEALEVGAVPVVLGEQVQLPYQDMLQWNEAALVVPKPRVTEVHFLLRSLSDSDLLAMRRQGRFLWETYFSTADSIFNTVLAMIRTRIQIPAAPIREEAAAEIPHRSGKAAGTDPNMADNGDLDLGPVETEPPYASPRYLRNFTLTVTDFYRSWNCAPGPFHLFPHTPFDPVLPSEAKFLGSGT-GFRPIGGGAGGSGKEFQAALGGNVPREQFTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKLPSEDLLWPDI 711

The following BLAST results are available for this feature:

BLAST of TCONS_00048669-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00048669-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EXTL3	3.536e-56	26.24	Exostosin-like 3 OS=Homo sapiens GN=EXTL3 PE=1 SV=...	[more]

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TCONS_00048669-protein (polypeptide) - C. hemisphaerica