TCONS_00048683-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048683-protein
Unique NameTCONS_00048683-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048683-protein ID=TCONS_00048683-protein|Name=TCONS_00048683-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MFLPASKSVFSSSRLGFNLLNRSHKFLSTTSKNKMPYQCYFDIAVGGQPV
GRVVMNIRDDVVPKTAENFKQLCTGEKGFGYAGSTFHRIIPGFMCQGGDF
TRGDGTGGKSIYGNKFPDENFQLKHTGPGILSMANAGPNTNGSQFFICTS
KTQWLDGKHTVFGTVDPDSMDIIKRMEAVGSESGKCKKPVTISKSGVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030930XLOC_030930Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048683TCONS_00048683Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR024936Cyclophilin-type_PPIase
IPR029000Cyclophilin-like_dom
IPR020892Cyclophilin-type_PPIase_CS
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 129..144
score: 84.4
coord: 144..156
score: 67.14
coord: 57..72
score: 53.29
coord: 86..98
score: 78.83
coord: 157..172
score: 41.67
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 41..196
e-value: 5.7E-44
score: 150.1
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 40..197
score: 43.773
IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomerasePIRSFPIRSF001467Peptidylpro_ismrsecoord: 21..198
e-value: 3.8E-74
score: 246.0
IPR029000Cyclophilin-like domainGENE3D2.40.100.10coord: 23..198
e-value: 5.0E-71
score: 237.6
IPR029000Cyclophilin-like domainSUPERFAMILY50891Cyclophilin-likecoord: 34..198
IPR020892Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved sitePROSITEPS00170CSA_PPIASE_1coord: 81..98
NoneNo IPR availableCDDcd01926cyclophilin_ABH_likecoord: 38..196
e-value: 3.23384E-105
score: 301.483

Blast
[Close]
BLAST of TCONS_00048683-protein vs. Swiss-Prot (Human)
Match: PPIF (Peptidyl-prolyl cis-trans isomerase F, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.775e-80
Identity = 108/159 (67.92%), Postives = 130/159 (81.76%), Query Frame = 0 
Query:   40 YFDIAVGGQPVGRVVMNIRDDVVPKTAENFKQLCTGEKGFGYAGSTFHRIIPGFMCQGGDFTRGDGTGGKSIYGNKFPDENFQLKHTGPGILSMANAGPNTNGSQFFICTSKTQWLDGKHTVFGTVDPDSMDIIKRMEAVGSESGKCKKPVTISKSGVL 198
            Y D+   G+P+GRVV+ ++ DVVPKTAENF+ LCTGEKGFGY GSTFHR+IP FMCQ GDFT  +GTGGKSIYG++FPDENF LKH GPG+LSMANAGPNTNGSQFFICT KT WLDGKH VFG V  + MD++K++E+ GS+SG+  K + I+  G L
Sbjct:   49 YLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVK-EGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
The following BLAST results are available for this feature:
BLAST of TCONS_00048683-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIF3.775e-8067.92Peptidyl-prolyl cis-trans isomerase F, mitochondri... [more]
back to top