TCONS_00049003-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049003-protein
Unique NameTCONS_00049003-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049003-protein ID=TCONS_00049003-protein|Name=TCONS_00049003-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
MRLVIHDSYDDVSAWAAKYIRNKIKRFKPDENKHFVLGLPTGGTPLGMYK
ALIKMYQDGEFSFKYVKTFNMDEYCGLPRDHPESYHYYMWSNFFKHIDID
PKNVNLLDGNAADLCAECDRYEEEIKKAGGINLFVGGIGPDGHIAFNEPG
SSLVSRTRVKTLAMETVVANSRFFDNDISKVPKMACTVGVGTVMDAEEVM
VLITGQSKAFALHKAIEEGISHMWTVSAFQQHPNTIFVCDEEATNELKVK
TVKYFKGLMNLYHGLVEDLDEDGNSKSPNKDECYTCN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031127XLOC_031127Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049003TCONS_00049003Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006148Glc/Gal-6P_isomerase
IPR004547Glucosamine6P_isomerase
IPR018321Glucosamine6P_isomerase_CS
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0006044N-acetylglucosamine metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004342glucosamine-6-phosphate deaminase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006044 N-acetylglucosamine metabolic process
molecular_function GO:0004342 glucosamine-6-phosphate deaminase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..124
NoneNo IPR availableGENE3D3.40.50.1360coord: 1..265
e-value: 1.7E-94
score: 315.4
NoneNo IPR availableSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 1..260
IPR006148Glucosamine/galactosamine-6-phosphate isomerasePFAMPF01182Glucosamine_isocoord: 10..232
e-value: 9.8E-20
score: 71.3
IPR004547Glucosamine-6-phosphate isomeraseTIGRFAMTIGR00502TIGR00502coord: 1..257
e-value: 3.1E-122
score: 404.9
IPR004547Glucosamine-6-phosphate isomeraseHAMAPMF_01241GlcN6P_deamincoord: 1..247
score: 39.71
IPR004547Glucosamine-6-phosphate isomeraseCDDcd01399GlcN6P_deaminasecoord: 10..247
e-value: 4.24147E-137
score: 388.767
IPR018321Glucosamine-6-phosphate isomerase, conserved sitePROSITEPS01161GLC_GALNAC_ISOMERASEcoord: 125..143

Blast
[Close]
BLAST of TCONS_00049003-protein vs. Swiss-Prot (Human)
Match: GNPI2 (Glucosamine-6-phosphate isomerase 2 OS=Homo sapiens GN=GNPDA2 PE=1 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 1.907e-153
Identity = 203/276 (73.55%), Postives = 242/276 (87.68%), Query Frame = 0 
Query:    1 MRLVIHDSYDDVSAWAAKYIRNKIKRFKPDENKHFVLGLPTGGTPLGMYKALIKMYQDGEFSFKYVKTFNMDEYCGLPRDHPESYHYYMWSNFFKHIDIDPKNVNLLDGNAADLCAECDRYEEEIKKAGGINLFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMETVVANSRFFDNDISKVPKMACTVGVGTVMDAEEVMVLITGQSKAFALHKAIEEGISHMWTVSAFQQHPNTIFVCDEEATNELKVKTVKYFKGLMNLYHGLVEDL--DEDGN 274
            MRLVI D+YD  S WAAKYI N+I +FKP ++++F LGLPTG TPLG YK LI+ +++G  SFKYVKTFNMDEY GLPR+HPESYH YMW+NFFKHIDIDP N ++LDGNAADL AECD +E +IK+AGGI+LFVGGIGPDGHIAFNEPGSSLVSRTR+KTLAM+T++AN+++FD D+SKVP MA TVGVGTVMDA EVM+LITG  KAFAL+KAIEEG++HMWTVSAFQQHP TIFVCDE+AT EL+VKTVKYFKGLM++++ LV+ L   +DGN
Sbjct:    1 MRLVILDNYDLASEWAAKYICNRIIQFKPGQDRYFTLGLPTGSTPLGCYKKLIEYHKNGHLSFKYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDAFENKIKEAGGIDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGLMHVHNKLVDPLFSMKDGN 276
The following BLAST results are available for this feature:
BLAST of TCONS_00049003-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNPI21.907e-15373.55Glucosamine-6-phosphate isomerase 2 OS=Homo sapien... [more]
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