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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00049091-protein ID=TCONS_00049091-protein|Name=TCONS_00049091-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1140bp
LQLAVNSPDGSFMQTESAQIPTEDVLSIMKWLNKPDEVSTCTLSISNVKS
SILSISLSRDGKHVACGTEDGHVFVYDKESSKEIHSFSGHSGAITACCYA
GDKLCSASTDSNISIWDLNTGHRLHSLSDHREPVTGCVVTRDGKLLVTVS
LDKTARLWNVNDGSAAGFLAGLDSPLNCVAMDTEDKHAALGGWNKCIVIW
NILENKKIASYNKGHKSSVRALAYSPNGSYLASSGLNGELLLWSTQSGAM
IGQLSELKHHVRHISFSTDGLQLFGASDDSSIKIWSGTLGCPERQIDDMD
EDDGNTDVSKQHNEYALSVCVSDHLVAIGYNSGKVSVYRNKGSRYHVAGH
ERLISTWKAHSSSVRSMCFLRSDSSEYKKDLVTASDDYKIIQWALKGRDH
KQARLLEGHTNGVTCVRAKEAYIISSSKDCSLRVWNAISFEAVGHRGNRA
QQPQQESSVATLHGHTGIVTGCDLSPCETKAISCGHDRALFIWDLTNFTS
LCVVHNAHGDGITACCWSDVGTYVVTGSNDFKLKLWNTKVLIENKDEMSK
LKERSTFIGHTTTINDVKYKFGCVVSSSADGHVKVWNQNGVEITTFQPHK
TRINSADLWAPGVSIEDEEQGTAWSTRTKDLTSIQQRVRAKTPKNLQDIL
LFTASDDGTTQSWRPFKPDLLNALYGHSNVVSEVKQGSNGELISGSLDET
IKVWDFKLSKEEDNGPAHSGEVTSIALHNNDTIATAGRDGRINHYIKNEL
TMTYVTPDLSPVTTLAFRPDGKRVYFGTSSGRMEWLSTDNTDHCEFYTRA
NCPVLSMATQGSLVFVCTTRQLYIFTINGNTLSKTRELCVSSPHTEGDFD
KITQMQPLHNNILATSFNRSLVFSPQILIKQMDRMLVEYFHNPQTIFVDR
DRDHQSTDAAFSSACLQNDGYYLIYTGQESGCISLKVTSDTEMSKKTQQD
ILNEPSQSRRKERVENVDFNGSYGGRGGRRGRGGFGRGRGRGRGGRLYSP
PSSDADEWDRGPVEDDWGPPNPIDDGDWGRTDEEIKKQDELYERDLEMED
LCNSSRKIHDSAVTGILIYDDVIVTSSKDATIKVWKYASNANRNLEHIHQ
IGLFSCRSSVISMAGYGDSDGVHLIVGDRIGNVEFLKLNI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR020472 | G-protein beta WD-40 repeat | PRINTS | PR00320 | GPROTEINBRPT | coord: 104..118
score: 38.4
coord: 692..706
score: 40.11
coord: 524..538
score: 34.21 |
| IPR001680 | WD40 repeat | SMART | SM00320 | WD40_4 | coord: 550..587
e-value: 0.0091
score: 25.2
coord: 747..787
e-value: 85.0
score: 4.8
coord: 247..286
e-value: 0.014
score: 24.6
coord: 302..339
e-value: 40.0
score: 6.9
coord: 455..494
e-value: 1.0E-6
score: 38.3
coord: 350..394
e-value: 0.13
score: 21.3
coord: 1049..1086
e-value: 0.33
score: 20.0
coord: 162..201
e-value: 5.6
score: 12.3
coord: 708..746
e-value: 1.1
score: 16.8
coord: 497..537
e-value: 1.4E-6
score: 37.9
coord: 589..664
e-value: 69.0
score: 5.4
coord: 399..436
e-value: 4.7E-4
score: 29.5
coord: 667..705
e-value: 0.0011
score: 28.3
coord: 38..77
e-value: 0.0024
score: 27.1
coord: 80..117
e-value: 3.4E-7
score: 39.9
coord: 120..159
e-value: 7.5E-8
score: 42.1
coord: 204..244
e-value: 3.9E-7
score: 39.7 |
| IPR001680 | WD40 repeat | PFAM | PF00400 | WD40 | coord: 555..587
e-value: 8.6E-4
score: 20.0
coord: 506..537
e-value: 2.9E-4
score: 21.5
coord: 672..705
e-value: 0.03
score: 15.1
coord: 82..117
e-value: 0.0019
score: 18.9
coord: 405..436
e-value: 3.4E-4
score: 21.2
coord: 209..244
e-value: 9.7E-5
score: 23.0
coord: 254..286
e-value: 0.0034
score: 18.1
coord: 458..494
e-value: 0.0027
score: 18.4
coord: 123..159
e-value: 9.8E-4
score: 19.8
coord: 50..77
e-value: 0.035
score: 14.9 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 462..497
score: 10.141 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 505..537
score: 11.177 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 406..436
score: 10.642 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 87..126
score: 12.313 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 212..253
score: 14.051 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 557..587
score: 9.472 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 127..168
score: 12.179 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 674..714
score: 11.31 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 1056..1095
score: 9.472 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 45..86
score: 8.871 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 254..286
score: 9.673 |
| IPR011042 | Six-bladed beta-propeller, TolB-like | GENE3D | 2.120.10.30 | | coord: 298..363
e-value: 2.7E-4
score: 19.6 |
| None | No IPR available | GENE3D | 2.140.10.30 | | coord: 550..656
e-value: 2.7E-8
score: 32.6 |
| None | No IPR available | GENE3D | 2.80.10.50 | | coord: 364..408
e-value: 6.6E-6
score: 25.7
coord: 409..432
e-value: 3.9E-5
score: 23.2 |
| None | No IPR available | GENE3D | 2.80.10.50 | | coord: 704..730
e-value: 1.1E-7
score: 31.0
coord: 657..703
e-value: 4.5E-7
score: 29.1 |
| None | No IPR available | GENE3D | 2.80.10.50 | | coord: 215..297
e-value: 2.2E-18
score: 65.6 |
| None | No IPR available | GENE3D | 1.10.10.670 | | coord: 433..491
e-value: 9.6E-12
score: 44.2
coord: 492..549
e-value: 1.8E-10
score: 40.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 943..1030 |
| None | No IPR available | CDD | cd00200 | WD40 | coord: 353..705
e-value: 7.9187E-41
score: 152.489 |
| None | No IPR available | CDD | cd00200 | WD40 | coord: 83..436
e-value: 2.51068E-47
score: 171.364 |
| None | No IPR available | SUPERFAMILY | 63825 | YWTD domain | coord: 755..934 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 6..151
e-value: 1.4E-31
score: 109.4 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 152..214
e-value: 2.0E-14
score: 53.0 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 731..1127
e-value: 7.8E-23
score: 79.9 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 104..118 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 423..437 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 188..202 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 524..538 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 146..160 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 481..495 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 692..706 |
| IPR017986 | WD40-repeat-containing domain | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 1056..1095
score: 9.336 |
| IPR017986 | WD40-repeat-containing domain | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 45..755
score: 68.601 |
| IPR017986 | WD40-repeat-containing domain | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 316..607 |
| IPR017986 | WD40-repeat-containing domain | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 651..801
coord: 550..614
coord: 1058..1095 |
| IPR017986 | WD40-repeat-containing domain | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 44..342 |
Blast
BLAST of TCONS_00049091-protein vs. Swiss-Prot (Human)
Match: TEP1 (Telomerase protein component 1 OS=Homo sapiens GN=TEP1 PE=1 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 7.125e-54 Identity = 180/718 (25.07%), Postives = 311/718 (43.31%), Query Frame = 0
Query: 29 MKWLNKPDEVST--CTLSISNVKSSILSISLSRDGKHVACGTEDGHVFVYDKESSKEIHSFSGHSGAITACCY-AGDKLCSASTDSNISIWDLNTGHRLHSLSDHREPVTGCVVTRDGKLLVTVSLDKTARLWNVNDGSAAGFLAGLDSPLNCVAMDTEDKHAALGGWNKCIVIWNILENKKIASYNKGHKSSVRALAYSPNGSYLASSGLNGELLLWSTQSGAMIGQLSELKHHVRHISFSTDGLQLFGASDDSSIKIWSGTLGCPERQIDDMDEDDGNTDVSKQHNEYALSVCVSD--HLVAIGYNSGKVSVYRNKGSRYHVAGHERLISTWKAHSSSVRSMCFLRSDSSEYKKDLVTASDDYKIIQWALKGRDHKQARLLEGHTNGVTCVRAKEAYIISSSKDCSLRVWNAISFEAVGHRGNRAQQPQQESSVATLHGHTGIVTGCDLSPCETKAISCGHDRALFIWDLTNFTSLCVVHN---AHGDGITACCWSDVGTYVVTGSNDFKLKLWNTKVLIENKDEMSKLKERSTFIGHTTTINDVKYKFGCVVSSSADGHVKVWNQNGVEITTFQPHKTRINSADLWAPGVSIEDEEQGTAWSTRTKDLTSIQQRVRAKTPKNLQDILLFTASDDGTTQSWRPFKPDLLNALYGHSNVV-SEVKQGSNGELISGSLDETIKVWDFKLSKEEDNGPAHSGEVTSIALHNNDTIATAG 737
++WLNKP + + V SS +++ S +G+ A GT +G V++ D + +E S I+AC + + D L + D + +WDL G R+ H+ +TGC ++ D +LL TV L +LW+ G A F LNCVA E + A G W I + + + K+ +S+R LA++ G +A L+ + LW+ + GA + V F G QL A +D +++WSG+LG P + G+ +S ALSV +S VA+GY + + +Y+ G +A +V ++ +L K LV+ ++D + WALK + LL V + + + S+S+D ++++W R + + L GH G V+ C S + G DR+L WD+ + ++H+ H D +T C W+ +++ S+D + LW+ E+ + + F+GH + ++ V VVS S DG +KVW+ GVE+T+ H I+ ++E G S ++L+ T DG T+ W P + L GHS V + ++G +++ S D ++++W ++ P S VT++A + ++A +G
Sbjct: 1654 LRWLNKPRTMKNQQSSSLSLAVSSSPTAVAFSTNGQRAAVGTANGTVYLLDLRTWQEEKSVVSGCDGISACLFLSDDTLFLTAFDGLLELWDLQHGCRVLQTKAHQYQITGCCLSPDCRLLATVCLGGCLKLWDTVRGQLA-FQHTYPKSLNCVAFHPEGQVIATGSWAGSISFFQV-DGLKVTKDLGAPGASIRTLAFNVPGGVVAVGRLDSMVELWAWREGARLAAFPAHHGFVAAALFLHAGCQLLTAGEDGKVQVWSGSLGRPRGHL-------GSLSLSP-----ALSVALSPDGDRVAVGYRADGIRIYKISSGSQGAQG--------QALDVAVSALAWLSP------KVLVSGAEDGSLQGWALKECSLQSLWLLSRFQKPVLGLATSQELLASASEDFTVQLWPRQLL-------TRPHKAEDFPCGTELRGHEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTK-DNLLISCSSDGSVGLWDP----ESGQRLGQ------FLGHQSAVSAVAAVEEHVVSVSRDGTLKVWDHQGVELTSIPAHSGPISHC-----AAAMEPRAAGQPGS----------------------ELLVVTVGLDGATRLWHPLLVCQTHTLLGHSGPVRAAAVSETSGLMLTASEDGSVRLWQVPKEADDTCIPRSSAAVTAVAWAPDGSMAVSG 2298
The following BLAST results are available for this feature:
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