TCONS_00049121-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049121-protein
Unique NameTCONS_00049121-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length632

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049121-protein ID=TCONS_00049121-protein|Name=TCONS_00049121-protein|organism=Clytia hemisphaerica|type=polypeptide|length=632bp
MKLITPEISWHQKEPIFSVDFCPETWKLASCGADFTIKVWQVKEKQDGDD
SIGIEFLSNLDRHGKPVNVVRFSPNGKVLASAGDDGAIVLWKLNENKSNN
MIDFSDDFGEDIVNKETWNVFKMLRGHVEDVYDLAWSPDSNQLITGSVDN
SAIIWDANKGQSLKILTDHKHYVQGVCWDPRGFYIATHSSDRSCRLYGST
HHKCLHNIHRNTSSYMKDGQLTKSKFSKMFIDETMQSFFRRCTFSPDGSF
LFLPAGLCEGEKKPKKTSYIFARGHYSRPVRQLPGTKKATVAIRCSPICY
ELMEDKEKNPELQENNDHFKIPYRMIYAVVSLDAVTLYDTQHSMPIGYCA
NMHYASLTDATWSSDGRLLVISSTDGYCSFIKFDEGELGTPITFDPIEYQ
DTQLKIRAAQRKEAKKKESEQRRKEKAEEKAAKKAEEKAAAAALLASSQA
TSSQNLDDKQPDGEKNPVLPTVDAKTPKSSKPVLDKNQPTIEKLFVTPVR
KRKRTSEMSPTITPKNEGSTTKCPSTPQNTPASTTTSTSNKTQQPKVDSL
LKSVKTTLQQTGDKKTPKRATVTTLLSFSNKANSSEKKPVAKPPTVKTPK
RVTATTLLTFGKSDSAXKPTHPKRNRLPNRQL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031216XLOC_031216Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049121TCONS_00049121Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001632Gprotein_B
IPR001680WD40_repeat
IPR011659PD40
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 409..444
NoneNo IPR availableGENE3D1.10.10.670coord: 39..105
e-value: 9.1E-15
score: 53.9
coord: 155..227
e-value: 2.1E-15
score: 55.9
NoneNo IPR availableGENE3D2.40.50.140coord: 6..38
e-value: 7.4E-6
score: 25.0
coord: 106..154
e-value: 2.7E-11
score: 42.4
IPR001632G-protein, beta subunitPRINTSPR00319GPROTEINBcoord: 180..197
score: 32.83
coord: 143..157
score: 39.19
coord: 124..140
score: 44.74
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 3..41
e-value: 0.0014
score: 27.9
coord: 159..198
e-value: 0.0017
score: 27.6
coord: 117..156
e-value: 1.4E-9
score: 47.9
coord: 53..92
e-value: 4.1E-7
score: 39.6
coord: 342..382
e-value: 2.3
score: 14.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 160..197
e-value: 0.011
score: 16.5
coord: 58..92
e-value: 9.5E-5
score: 23.0
coord: 120..156
e-value: 3.3E-7
score: 30.8
coord: 11..40
e-value: 0.22
score: 12.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 60..101
score: 14.786
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 124..165
score: 16.19
IPR011659WD40-like Beta PropellerPFAMPF07676PD40coord: 359..376
e-value: 0.12
score: 12.2
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 228..397
e-value: 2.8E-9
score: 36.0
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 143..157
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 9..207
score: 29.187
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 10..249
coord: 326..393

Blast
[Close]
BLAST of TCONS_00049121-protein vs. Swiss-Prot (Human)
Match: CAF1B (Chromatin assembly factor 1 subunit B OS=Homo sapiens GN=CHAF1B PE=1 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 3.651e-137
Identity = 201/427 (47.07%), Postives = 273/427 (63.93%), Query Frame = 0 
Query:    1 MKLITPEISWHQKEPIFSVDF----CPETWKLASCGADFTIKVWQVKEKQDGDDSIGIEFLSNLDRHGKPVNVVRFSPNGKVLASAGDDGAIVLWKLNENKSNNMIDFSDDFGEDIVNKETWNVFKMLRGHVEDVYDLAWSPDSNQLITGSVDNSAIIWDANKGQSLKILTDHKHYVQGVCWDPRGFYIATHSSDRSCRLYGSTHHKCLHNIHRNTSSYMKDGQLTKSKFSKMFIDETMQSFFRRCTFSPDGSFLFLPAGLCEGEKKPKKTSYIFARGHYSRPVRQLPGTKKATVAIRCSPICYELMEDKEKNPELQENNDHFKIPYRMIYAVVSLDAVTLYDTQHSMPIGYCANMHYASLTDATWSSDGRLLVISSTDGYCSFIKFDEGELGTPITFDPIEYQDTQLKIRAAQRKEAKKKESEQRR 423
            MK+IT EI+WH KEP++S+DF         +LAS G D  +++W+V++  DG   +  EFLSNL RH K VNVVRFSP G++LAS GDD  I+LWK+N+NK    I F D+  E  +NKE W V K LRGH+EDVYD+ W+ D N + + SVDN+AIIWD +KGQ + I  +HK YVQGV WDP G Y+AT S DR  R+Y     +   N+ +  S    +G+   ++  +MF D++M+SFFRR +F+PDGS L  PAG  E  +    T+Y+F+R +  RP+  LP   KAT+A+RC P+ +EL    E   EL        +PYR+++AV S D+V LYDTQ S P GY +N+HY +L+D +WSSDG  L ISSTDGYCSF+ F++ ELG P+   P+      L +R      AKK +S+  R
Sbjct:    1 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIV--EFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDE-DEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGE---ARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFELRPVVETGVEL------MSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEKPV------LNMRTPD--TAKKTKSQTHR 407
The following BLAST results are available for this feature:
BLAST of TCONS_00049121-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAF1B3.651e-13747.07Chromatin assembly factor 1 subunit B OS=Homo sapi... [more]
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