TCONS_00049997-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049997-protein
Unique NameTCONS_00049997-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length150

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049997-protein ID=TCONS_00049997-protein|Name=TCONS_00049997-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
MTEFVGSEERIAEYKECFNLYDRDNDGLISIEQMKQVIRSLGQCPSDKEL
KELQQKLGKTKITFPEFLDLMGKVMQKSRNPESEIFEGFRLYDQRQTGMI
SMKDLRHVMMRNGEKLSQPEFDYMLKEAGISKQSTNVKYADLARAFKQVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031677XLOC_031677Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049997TCONS_00049997Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 84..112
e-value: 23.0
score: 6.7
coord: 13..41
e-value: 9.2E-5
score: 31.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 15..71
e-value: 6.2E-8
score: 32.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 80..115
score: 10.19
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 9..44
score: 14.541
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 61..77
score: 5.922
IPR002048EF-hand domainCDDcd00051EFhcoord: 13..71
e-value: 1.8277E-9
score: 49.0833
NoneNo IPR availableGENE3D1.10.238.10coord: 39..61
e-value: 2.0E-7
score: 30.6
NoneNo IPR availableGENE3D1.10.238.10coord: 100..147
e-value: 2.3E-7
score: 30.3
NoneNo IPR availableGENE3D1.10.238.10coord: 62..99
e-value: 7.8E-9
score: 34.7
NoneNo IPR availableGENE3D1.10.238.10coord: 1..38
e-value: 2.6E-13
score: 49.1
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 7..144

Blast
[Close]
BLAST of TCONS_00049997-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.801e-33
Identity = 58/127 (45.67%), Postives = 86/127 (67.72%), Query Frame = 0 
Query:    7 SEERIAEYKECFNLYDRDNDGLISIEQMKQVIRSLGQCPSDKELKELQQKL---GKTKITFPEFLDLMGKVMQKSRNPESEIFEGFRLYDQRQTGMISMKDLRHVMMRNGEKLSQPEFDYMLKEAGI 130
            +EE+IAE+KE F+L+D+D DG I+ +++  V+RSLGQ P++ EL+++  ++   G   I FPEFL +M + M K  + E EI E FR++D+   G IS  +LRHVM   GEKL+  E D M++EA I
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM-KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
The following BLAST results are available for this feature:
BLAST of TCONS_00049997-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.801e-3345.67Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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