TCONS_00050129-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050129-protein
Unique Name	TCONS_00050129-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1023

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050129-protein ID=TCONS_00050129-protein|Name=TCONS_00050129-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1023bp
MRLLHFWKAFNIRPRSFQKAIVNDSTNFHRKMATFSSMEAVSGEYKHLNG
IFKNVLESSTDNLEFFNQKQKQDFHSSFQNIINVLDPLQMSLGVITNCCS
KFDASPTSKGNGYRSIISIIESCLIKIQELSRHIQRSREKIFFRSYHVYM
ELESYSQVLTRLLTISHLAIVLLDYSDVGNLFPHDCVVDDMMIDFEKINR
ECFYGRSFGFQYSDSIRQSLHVIAVAMAAYGDGYQQHNHSLTRALSSMLH
SGKYMVNPELRAQRINELTQNANIDFCKAFWGLTEEYGVQHAPLLICPAM
AVNLEFEIPPQQLGVQTVDKQNEVTVDFPFLNSGYTGIPCRLLSYVLRSG
QDSLNKAGSASSSGVSPLGPKPAQKSRYLMIHCHGGGFVAQSSKSHEMYL
RYMAKELQIPILSIDYSLAPDAPYPQAVKEVYYAYVWALNNFDKLGTLGE
KIVFAGDSAGANIVTAITIQAIKDNIRLPDSIVVAYPPYRLQFLPSPSRI
LCLMDPLLPVGVLKSCIQAYTGGFKHVASNTNMFTFDPSSYNAFDLDFGE
EDNRGFLSKKHLQHSYSETQLNVIKAKYNNEFEESSSFMQENESFCSEFP
VYDSEGDILNTESAEDTKSDVAEDDFLYFKSSTAHAQDGGTSDEDKKSTG
SASLLQSLSDQVSSKVQGLTTSISGYFLSNLPTSESNKNNNECSSKQTQE
QTGVIKNRKKSLELNLDLGNQNSMNKNSTKDNGKSSFTICRECLFRSEQC
ICHLSPKALRRRAEKYTEHYKFSHHHVLNSPRRVRSSSLTHREHSGKEHS
KVHRIRSVTHCNPQEIGLNIDTDEGALCSPTAKDKALQNFRLSLLGSSTE
TPPASPSTQRTQSSAPSPRVVYDSTTESCVILTPEEEGQVHTEGELGGGG
ETKDMLGATSKAFNDAKDPLMSPFLADDETLKCMPPITIVASALDPLLDD
SVEFVRKLQKLEKPSELYILEKLPHGFLNFQPFSTEAREGCDLIIACVKK
SLHMGMRRLDSTQSFGFPAKDSP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031734	XLOC_031734	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050129	TCONS_00050129	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013094	AB_hydrolase_3
IPR029058	AB_hydrolase
IPR010468	HSL_N
IPR033140	Lipase_GDXG_put_SER_AS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity
GO:0016298	lipase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process
GO:0016042	lipid catabolic process
GO:0008203	cholesterol metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008203	cholesterol metabolic process
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0008152	metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016298	lipase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013094	Alpha/beta hydrolase fold-3	PFAM	PF07859	Abhydrolase_3	coord: 380..522 e-value: 1.9E-28 score: 99.7 coord: 913..978 e-value: 8.1E-9 score: 35.5
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820		coord: 364..693 e-value: 4.2E-26 score: 91.1
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820		coord: 837..1012 e-value: 7.6E-14 score: 51.0
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 908..1000
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 374..533
IPR010468	Hormone-sensitive lipase, N-terminal	PFAM	PF06350	HSL_N	coord: 52..351 e-value: 1.3E-86 score: 290.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 680..707
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 633..652
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 846..870
IPR033140	Lipase, GDXG, putative serine active site	PROSITE	PS01174	LIPASE_GDXG_SER	coord: 452..464

Blast

[Close]

BLAST of TCONS_00050129-protein vs. Swiss-Prot (Human)
Match: LIPS (Hormone-sensitive lipase OS=Homo sapiens GN=LIPE PE=1 SV=4)

HSP 1 Score: 348.206 bits (892), Expect = 2.422e-103
Identity = 183/496 (36.90%), Postives = 285/496 (57.46%), Query Frame = 0

Query:   48 LNGIFKNVLESSTDNLEFFNQK----QKQDFHSSFQNIINVLDPLQMSLGVITNCCSKFDASPTSKGNGYRSIISIIESCLIKIQELSRHIQRSREKIFFRSYHVYMELESYSQVLTRLLTISHLAIVLLDYSDVGNLF--PHDCVVDDMMIDFEKINRECFYGRSFGFQYSDSIRQSLHVIAVAMAAYGDGYQQHNHSLTRALSSMLHSGKYMVNPELRAQRINELTQNANIDFCKAFWGLTEEYGVQHAPLLICPAMAVNLEFEIPPQQLGVQ-TVDKQNEVTVDFPFLNSGYTGIPCRLLSYVLRSGQDSLNKAGSASSSGVSPL--GPKPAQ--KSRYLMIHCHGGGFVAQSSKSHEMYLRYMAKELQIPILSIDYSLAPDAPYPQAVKEVYYAYVWALNNFDKLGTLGEKIVFAGDSAGANIVTAITIQAIKDNIRLPDSIVVAYPPYRLQFLPSPSRILCLMDPLLPVGVLKSCIQAYTGGFKHVASNTN 532
            L  + ++++  + DN+ FF+ +      Q     F  +      L+ +LG +      FD  P +  NGYRS++     CL  +   SR++  +R  IFFR+ H   ELE+Y   LT+L  + + A  LL  +  G LF    + +  D + ++  +++ CFYGR  GFQ++ +IR  L  I++ + ++G+ Y+++   L+ A SS+  SG++ ++PELR      +TQN ++ F KAFW +TE   +     +    + V+    +PP+   +  T D    VT+  P  ++G   +  RL+SY LR GQDS   +    S+G   L   P+P Q  +SR L++H HGGGFVAQ+S+SHE YL+  A+EL  PI+SIDYSLAP+AP+P+A++E ++AY WA+ +   LG+ GE+I  AGDSAG N+   + ++A    +R+PD I+ AYP   LQ   SPSR+L LMDPLLP+ VL  C+ AY G      SN++
Sbjct:  304 LRTMTQSLVTLAEDNIAFFSSQGPGETAQRLSGVFAGVREQALGLEPALGRLLGVAHLFDLDPETPANGYRSLVHTARCCLAHLLHKSRYVASNRRSIFFRTSHNLAELEAYLAALTQLRALVYYAQRLLVTNRPGVLFFEGDEGLTADFLREYVTLHKGCFYGRCLGFQFTPAIRPFLQTISIGLVSFGEHYKRNETGLSVAASSLFTSGRFAIDPELRGAEFERITQNLDVHFWKAFWNITEMEVLSSLANMASATVRVSRLLSLPPEAFEMPLTADPTLTVTISPPLAHTGPGPVLVRLISYDLREGQDSEELSSLIKSNGQRSLELWPRPQQAPRSRSLIVHFHGGGFVAQTSRSHEPYLKSWAQELGAPIISIDYSLAPEAPFPRALEECFFAYCWAIKHCALLGSTGERICLAGDSAGGNLCFTVALRAAAYGVRVPDGIMAAYPATMLQPAASPSRLLSLMDPLLPLSVLSKCVSAYAGAKTEDHSNSD 799

HSP 2 Score: 88.9669 bits (219), Expect = 8.339e-18
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0

Query:  917 KDPLMSPFLADDETLKCMPPITIVASALDPLLDDSVEFVRKLQKLEKPSELYILEKLPHGFLNFQPFSTEAREGCDLIIACVK 999
            K+P MSP LA D  LK +PP+ IVA ALDP+LDDSV   R+L+ L +P  L ++E LPHGFL       E R+  +L +  ++
Sbjct:  966 KNPFMSPLLAPDSMLKSLPPVHIVACALDPMLDDSVMLARRLRNLGQPVTLRVVEDLPHGFLTLAALCRETRQAAELCVERIR 1048

The following BLAST results are available for this feature:

BLAST of TCONS_00050129-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050129-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LIPS	2.422e-103	36.90	Hormone-sensitive lipase OS=Homo sapiens GN=LIPE P...	[more]

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TCONS_00050129-protein (polypeptide) - C. hemisphaerica