TCONS_00050611-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050611-protein
Unique NameTCONS_00050611-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length636

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050611-protein ID=TCONS_00050611-protein|Name=TCONS_00050611-protein|organism=Clytia hemisphaerica|type=polypeptide|length=636bp
FVNCLSIRMIGCKILCSVLLSSLLLENGSSLAILDDLDQVTMVTNDNGKE
YVRVCYYTNWAQYRSGLGKFTPANIDPFLCTHIAYSFAKIVNNRLQYYEW
NDVEYANMVGQVMALKNQNPKLKVLLAVGGWTHETNTSPFSVMVSTASNR
QTFIQHSIQLLRQHGFDGLDLDWEYPGVRPNENKPGDKQRFTVLCKELMD
SYKKEAIDTGSDRLLLTAAVAAGEATIRKAYETDKLGSHLDMLHLMSYDL
AGAWEPVTGHHTSMDASLTNSIPNALDVWINGGFPANKIALGLGTYGRSF
TLTSTANNGLGADAIGGGATGQYTGESGYIAYYEICQKINQGMTVVETSS
AGATYGYLGNYWVGYDSEASMIHKVRSLIKGRGLKGAMFWAIDLDDFTGS
FCNNGKYPLMNAVKNELASGQPFTTQPPSETTVKPSPTETPITSEEATTE
APVTAPPITTLVPQTTEQETTETPSGKCYPTPNYASQPGMKQWCTTNCKP
GEFSYCPASHCICDRTTPQPPATTQVSPTTQPLPTTQPPATTQLPATTQP
QETESPGTACHSIPPYDKQPGMDQWCEQNCALGYCPISHCKCGGGTESPY
ASCHGVPPYHTQAGIDGWCRQNCASDYCPSSHCKCD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032057XLOC_032057Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050611TCONS_00050611Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR017853Glycoside_hydrolase_SF
IPR029070Chitinase_insertion
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0008061 chitin binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011583Chitinase IISMARTSM006362g34coord: 51..395
e-value: 4.4E-115
score: 398.3
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 54..395
e-value: 1.5E-79
score: 267.9
NoneNo IPR availableGENE3D3.20.20.80coord: 37..433
e-value: 1.4E-98
score: 330.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..451
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..558
NoneNo IPR availableCDDcd02872GH18_chitolectin_chitotriosidasecoord: 53..417
e-value: 1.76338E-179
score: 515.571
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 166..174
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 371..417
coord: 52..300
IPR029070Chitinase insertion domainSUPERFAMILY54556Chitinase insertion domaincoord: 296..365

Blast
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BLAST of TCONS_00050611-protein vs. Swiss-Prot (Human)
Match: CHIT1 (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 6.260e-112
Identity = 180/403 (44.67%), Postives = 252/403 (62.53%), Query Frame = 0 
Query:   54 VCYYTNWAQYRSGLGKFTPANIDPFLCTHIAYSFAKIVNNRLQYYEWNDVEYANMVGQVMALKNQNPKLKVLLAVGGWTHETNTSPFSVMVSTASNRQTFIQHSIQLLRQHGFDGLDLDWEYPGVRPNENKPG-DKQRFTVLCKELMDSYKKEAIDTGSDRLLLTAAVAAGEATIRKAYETDKLGSHLDMLHLMSYDLAGAWEPVTGHHTSM-------DASLTNSIPNALDVWINGGFPANKIALGLGTYGRSFTLTSTANNGLGADAIGGGATGQYTGESGYIAYYEICQKINQGMTVVETSSAGATYGYLGNYWVGYDSEASMIHKVRSLIKGRGLKGAMFWAIDLDDFTGSFCNNGKYPLMNAVKNELA-----SGQPFTTQP----PSETTVKPSPTE 439
            VCY+TNWAQYR G  +F P ++DP LCTH+ Y+FA + N++L   EWND     +  +   LK  NPKLK LLA+GGW     T  F+ MV+TA+NRQTF+  +I+ LR++ FDGLDLDWEYPG   ++  P  DK+RFT L ++L +++++EA  +G +RLLL+AAV AG+  +   YE DK+  +LD ++LM+YD  G+WE VTGH++ +        A+ + ++  A+  W+  G PA+K+ LG+ TYGRSFTL S+++  +GA A G G  G +T E G +AYYE+C    +G T          Y +  N WVG+D   S   KV S +K +GL GAM WA+DLDDF G  CN G+YPL+  ++ EL+     SG P    P    PSE    PSP +
Sbjct:   25 VCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWND---ETLYQEFNGLKKMNPKLKTLLAIGGWNF--GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPG---SQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSW--KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKV-SYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQ 416
The following BLAST results are available for this feature:
BLAST of TCONS_00050611-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHIT16.260e-11244.67Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV... [more]
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